data_6a1o_residue ############################ # Computer software used # ############################ save_MolProbity _Software.Sf_category software _Software.Sf_framecode MolProbity _Software.Entry_ID ? _Software.ID 1 _Software.Name MolProbity _Software.Version 4.0 _Software.Details . save_ save_CYRANGE _Software.Sf_category software _Software.Sf_framecode CYRANGE _Software.Entry_ID ? _Software.ID 2 _Software.Name CYRANGE _Software.Version 2.0 _Software.Details . save_ save_Structure_validation_residue _Structure_validation_residue.Sf_category structure_validation _Structure_validation_residue.Sf_framecode Structure_validation_residue _Structure_validation_residue.Entry_ID ? _Structure_validation_residue.List_ID 1 _Structure_validation_residue.PDB_accession_code 6a1o _Structure_validation_residue.Date_analyzed 2019-01-11 loop_ _Residue_analysis_software.Software_ID _Residue_analysis_software.Software_label _Residue_analysis_software.Method_ID _Residue_analysis_software.Method_label _Residue_analysis_software.Entry_ID _Residue_analysis_software.Structure_validation_oneline_list_ID 1 MolProbity . . ? 1 2 CYRANGE . . ? 1 stop_ loop_ _Residue_analysis.ID _Residue_analysis.PDB_model_num _Residue_analysis.Hydrogen_positions _Residue_analysis.MolProbity_flips _Residue_analysis.Cyrange_core_flag _Residue_analysis.Two_letter_chain_ID _Residue_analysis.PDB_strand_ID _Residue_analysis.PDB_residue_no _Residue_analysis.PDB_ins_code _Residue_analysis.PDB_residue_name _Residue_analysis.Assembly_ID _Residue_analysis.Entity_assembly_ID _Residue_analysis.Entity_ID _Residue_analysis.Comp_ID _Residue_analysis.Comp_index_ID _Residue_analysis.Clash_value _Residue_analysis.Clash_source_PDB_atom_name _Residue_analysis.Clash_destination_PDB_atom_name _Residue_analysis.Clash_destination_PDB_strand_ID _Residue_analysis.Clash_destination_PDB_residue_no _Residue_analysis.Clash_destination_PDB_ins_code _Residue_analysis.Clash_destination_PDB_residue_name _Residue_analysis.Cbeta_deviation_value _Residue_analysis.Rotamer_score _Residue_analysis.Rotamer_name _Residue_analysis.Ramachandran_phi _Residue_analysis.Ramachandran_psi _Residue_analysis.Ramachandran_score _Residue_analysis.Ramachandran_evaluation _Residue_analysis.Ramachandran_type _Residue_analysis.Bond_outlier_count _Residue_analysis.Worst_bond _Residue_analysis.Worst_bond_value _Residue_analysis.Worst_bond_sigma _Residue_analysis.Angle_outlier_count _Residue_analysis.Worst_angle _Residue_analysis.Worst_angle_value _Residue_analysis.Worst_angle_sigma _Residue_analysis.RNA_phosphate_perpendicular_outlier _Residue_analysis.RNA_suitness_score _Residue_analysis.RNA_suite_conformer _Residue_analysis.RNA_suite_triage _Residue_analysis.Max_b_factor _Residue_analysis.Tau_angle _Residue_analysis.Omega_dihedral _Residue_analysis.Disulfide_chi1 _Residue_analysis.Disulfide_chi2 _Residue_analysis.Disulfide_chi3 _Residue_analysis.Disulfide_ss_angle _Residue_analysis.Disulfide_ss _Residue_analysis.Disulfide_ss_angle_prime _Residue_analysis.Disulfide_chi2prime _Residue_analysis.Disulfide_chi1prime _Residue_analysis.Outlier_count_separate_geometry _Residue_analysis.Outlier_count _Residue_analysis.Entry_ID _Residue_analysis.Structure_validation_residue_list_ID . 001 ecloud orig full ' A' A ' 1' ' ' ' DT' . . . . . . . . . . . . . . . . . . . . 0 C3'--C2' 1.513 -0.471 0 O5'-P-OP1 103.183 -1.696 . . . . 31.37 . . . . . . . . . . 0 0 . 1 . 001 ecloud orig full ' A' A ' 2' ' ' ' DG' . . . . . . . . . . . . . . . . . . . . 0 P--O3' 1.598 -0.762 0 C3'-C2'-C1' 104.694 1.425 . . . . 19.53 . . . . . . . . . . 0 0 . 1 . 001 ecloud orig full ' B' B ' 3' ' ' ' DC' . . . . . . . . . . . . . . . . . . . . 0 O3'--C3' 1.421 -0.798 0 C4'-C3'-O3' 104.188 -2.778 . . . . 32.08 . . . . . . . . . . 0 0 . 1 . 001 ecloud orig full ' B' B ' 4' ' ' ' DA' . . . . . . . . . . . . . . . . . . . . 0 P--O3' 1.579 -2.334 0 P-O3'-C3' 122.528 2.357 . . . . 38.55 . . . . . . . . . . 0 0 . 1 . 001 ecloud orig full ' C' C ' 5' ' ' ' DT' . . . . . 0.935 ' C7 ' ' N4 ' ' D' ' 11' ' ' ' DC' . . . . . . . . 0 O5'--C5' 1.425 -0.935 0 C3'-C2'-C1' 100.454 -1.604 . . . . 20.11 . . . . . . . . . . 1 1 . 1 . 001 ecloud orig full ' C' C ' 6' ' ' ' DG' . . . . . 0.422 ' O6 ' ' N6 ' ' D' ' 10' ' ' ' DA' . . . . . . . . 0 P--O3' 1.577 -2.482 0 C3'-C2'-C1' 105.411 1.937 . . . . 45.75 . . . . . . . . . . 1 1 . 1 . 001 ecloud orig full ' C' C ' 7' ' ' ' DT' . . . . . 0.449 ' C7 ' ' N4 ' ' D' ' 9' ' ' ' DC' . . . . . . . . 0 P--OP2 1.471 -0.794 0 C3'-C2'-C1' 100.046 -1.895 . . . . 43.94 . . . . . . . . . . 1 1 . 1 . 001 ecloud orig full ' C' C ' 8' ' ' ' DG' . . . . . . . . . . . . . . . . . . . . 0 P--O3' 1.569 -3.135 0 C1'-O4'-C4' 105.99 -2.65 . . . . 40.93 . . . . . . . . . . 0 0 . 1 . 001 ecloud orig full ' D' D ' 9' ' ' ' DC' . . . . . 0.449 ' N4 ' ' C7 ' ' C' ' 7' ' ' ' DT' . . . . . . . . 0 O4'--C1' 1.408 -0.953 0 C4'-C3'-C2' 104.441 1.241 . . . . 23.78 . . . . . . . . . . 1 1 . 1 . 001 ecloud orig full ' D' D ' 10' ' ' ' DA' . . . . . 0.422 ' N6 ' ' O6 ' ' C' ' 6' ' ' ' DG' . . . . . . . . 0 P--O3' 1.574 -2.751 0 C3'-C2'-C1' 105.408 1.934 . . . . 49.16 . . . . . . . . . . 1 1 . 1 . 001 ecloud orig full ' D' D ' 11' ' ' ' DC' . . . . . 0.935 ' N4 ' ' C7 ' ' C' ' 5' ' ' ' DT' . . . . . . . . 0 P--O3' 1.576 -2.579 0 O5'-C5'-C4' 111.944 1.246 . . . . 50.8 . . . . . . . . . . 1 1 . 1 . 001 ecloud orig full ' D' D ' 12' ' ' ' DA' . . . . . . . . . . . . . . . . . . . . 0 P--O3' 1.577 -2.489 0 C3'-C2'-C1' 104.848 1.534 . . . . 47.04 . . . . . . . . . . 0 0 . 1 . 001 ecloud orig full ' B' B ' 101' ' ' HOH . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 0 0 . 1 . 001 ecloud orig full ' D' D ' 101' ' ' HOH . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 0 0 . 1 . 001 ecloud orig full ' D' D ' 102' ' ' HOH . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 0 0 . 1 . 001 ecloud build full ' A' A ' 1' ' ' ' DT' . . . . . . . . . . . . . . . . . . . . 0 C3'--C2' 1.513 -0.471 0 O5'-P-OP1 103.183 -1.696 . . . . 31.37 . . . . . . . . . . 0 0 . 1 . 001 ecloud build full ' A' A ' 2' ' ' ' DG' . . . . . . . . . . . . . . . . . . . . 0 P--O3' 1.598 -0.762 0 C3'-C2'-C1' 104.694 1.425 . . . . 19.53 . . . . . . . . . . 0 0 . 1 . 001 ecloud build full ' B' B ' 3' ' ' ' DC' . . . . . . . . . . . . . . . . . . . . 0 O3'--C3' 1.421 -0.798 0 C4'-C3'-O3' 104.188 -2.778 . . . . 32.08 . . . . . . . . . . 0 0 . 1 . 001 ecloud build full ' B' B ' 4' ' ' ' DA' . . . . . . . . . . . . . . . . . . . . 0 P--O3' 1.579 -2.334 0 P-O3'-C3' 122.528 2.357 . . . . 38.55 . . . . . . . . . . 0 0 . 1 . 001 ecloud build full ' C' C ' 5' ' ' ' DT' . . . . . 0.935 ' C7 ' ' N4 ' ' D' ' 11' ' ' ' DC' . . . . . . . . 0 O5'--C5' 1.425 -0.935 0 C3'-C2'-C1' 100.454 -1.604 . . . . 20.11 . . . . . . . . . . 1 1 . 1 . 001 ecloud build full ' C' C ' 6' ' ' ' DG' . . . . . 0.422 ' O6 ' ' N6 ' ' D' ' 10' ' ' ' DA' . . . . . . . . 0 P--O3' 1.577 -2.482 0 C3'-C2'-C1' 105.411 1.937 . . . . 45.75 . . . . . . . . . . 1 1 . 1 . 001 ecloud build full ' C' C ' 7' ' ' ' DT' . . . . . 0.51 ' H73' ' N4 ' ' D' ' 9' ' ' ' DC' . . . . . . . . 0 P--OP2 1.471 -0.794 0 C3'-C2'-C1' 100.046 -1.895 . . . . 43.94 . . . . . . . . . . 1 1 . 1 . 001 ecloud build full ' C' C ' 8' ' ' ' DG' . . . . . . . . . . . . . . . . . . . . 0 P--O3' 1.569 -3.135 0 C1'-O4'-C4' 105.99 -2.65 . . . . 40.93 . . . . . . . . . . 0 0 . 1 . 001 ecloud build full ' D' D ' 9' ' ' ' DC' . . . . . 0.93 " H4'" H5'' ' D' ' 10' ' ' ' DA' . . . . . . . . 0 O4'--C1' 1.408 -0.953 0 C4'-C3'-C2' 104.441 1.241 . . . . 23.78 . . . . . . . . . . 1 1 . 1 . 001 ecloud build full ' D' D ' 10' ' ' ' DA' . . . . . 0.93 H5'' " H4'" ' D' ' 9' ' ' ' DC' . . . . . . . . 0 P--O3' 1.574 -2.751 0 C3'-C2'-C1' 105.408 1.934 . . . . 49.16 . . . . . . . . . . 1 1 . 1 . 001 ecloud build full ' D' D ' 11' ' ' ' DC' . . . . . 0.935 ' N4 ' ' C7 ' ' C' ' 5' ' ' ' DT' . . . . . . . . 0 P--O3' 1.576 -2.579 0 O5'-C5'-C4' 111.944 1.246 . . . . 50.8 . . . . . . . . . . 1 1 . 1 . 001 ecloud build full ' D' D ' 12' ' ' ' DA' . . . . . 0.423 " O4'" " H4'" ' D' ' 11' ' ' ' DC' . . . . . . . . 0 P--O3' 1.577 -2.489 0 C3'-C2'-C1' 104.848 1.534 . . . . 47.04 . . . . . . . . . . 1 1 . 1 . 001 ecloud build full ' B' B ' 101' ' ' HOH . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 0 0 . 1 . 001 ecloud build full ' D' D ' 101' ' ' HOH . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 0 0 . 1 . 001 ecloud build full ' D' D ' 102' ' ' HOH . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 0 0 . 1 . 001 ecloud nobuild full ' A' A ' 1' ' ' ' DT' . . . . . . . . . . . . . . . . . . . . 0 C3'--C2' 1.513 -0.471 0 O5'-P-OP1 103.183 -1.696 . . . . 31.37 . . . . . . . . . . 0 0 . 1 . 001 ecloud nobuild full ' A' A ' 2' ' ' ' DG' . . . . . . . . . . . . . . . . . . . . 0 P--O3' 1.598 -0.762 0 C3'-C2'-C1' 104.694 1.425 . . . . 19.53 . . . . . . . . . . 0 0 . 1 . 001 ecloud nobuild full ' B' B ' 3' ' ' ' DC' . . . . . . . . . . . . . . . . . . . . 0 O3'--C3' 1.421 -0.798 0 C4'-C3'-O3' 104.188 -2.778 . . . . 32.08 . . . . . . . . . . 0 0 . 1 . 001 ecloud nobuild full ' B' B ' 4' ' ' ' DA' . . . . . . . . . . . . . . . . . . . . 0 P--O3' 1.579 -2.334 0 P-O3'-C3' 122.528 2.357 . . . . 38.55 . . . . . . . . . . 0 0 . 1 . 001 ecloud nobuild full ' C' C ' 5' ' ' ' DT' . . . . . 0.935 ' C7 ' ' N4 ' ' D' ' 11' ' ' ' DC' . . . . . . . . 0 O5'--C5' 1.425 -0.935 0 C3'-C2'-C1' 100.454 -1.604 . . . . 20.11 . . . . . . . . . . 1 1 . 1 . 001 ecloud nobuild full ' C' C ' 6' ' ' ' DG' . . . . . 0.422 ' O6 ' ' N6 ' ' D' ' 10' ' ' ' DA' . . . . . . . . 0 P--O3' 1.577 -2.482 0 C3'-C2'-C1' 105.411 1.937 . . . . 45.75 . . . . . . . . . . 1 1 . 1 . 001 ecloud nobuild full ' C' C ' 7' ' ' ' DT' . . . . . 0.51 ' H73' ' N4 ' ' D' ' 9' ' ' ' DC' . . . . . . . . 0 P--OP2 1.471 -0.794 0 C3'-C2'-C1' 100.046 -1.895 . . . . 43.94 . . . . . . . . . . 1 1 . 1 . 001 ecloud nobuild full ' C' C ' 8' ' ' ' DG' . . . . . . . . . . . . . . . . . . . . 0 P--O3' 1.569 -3.135 0 C1'-O4'-C4' 105.99 -2.65 . . . . 40.93 . . . . . . . . . . 0 0 . 1 . 001 ecloud nobuild full ' D' D ' 9' ' ' ' DC' . . . . . 0.93 " H4'" H5'' ' D' ' 10' ' ' ' DA' . . . . . . . . 0 O4'--C1' 1.408 -0.953 0 C4'-C3'-C2' 104.441 1.241 . . . . 23.78 . . . . . . . . . . 1 1 . 1 . 001 ecloud nobuild full ' D' D ' 10' ' ' ' DA' . . . . . 0.93 H5'' " H4'" ' D' ' 9' ' ' ' DC' . . . . . . . . 0 P--O3' 1.574 -2.751 0 C3'-C2'-C1' 105.408 1.934 . . . . 49.16 . . . . . . . . . . 1 1 . 1 . 001 ecloud nobuild full ' D' D ' 11' ' ' ' DC' . . . . . 0.935 ' N4 ' ' C7 ' ' C' ' 5' ' ' ' DT' . . . . . . . . 0 P--O3' 1.576 -2.579 0 O5'-C5'-C4' 111.944 1.246 . . . . 50.8 . . . . . . . . . . 1 1 . 1 . 001 ecloud nobuild full ' D' D ' 12' ' ' ' DA' . . . . . 0.423 " O4'" " H4'" ' D' ' 11' ' ' ' DC' . . . . . . . . 0 P--O3' 1.577 -2.489 0 C3'-C2'-C1' 104.848 1.534 . . . . 47.04 . . . . . . . . . . 1 1 . 1 . 001 ecloud nobuild full ' B' B ' 101' ' ' HOH . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 0 0 . 1 . 001 ecloud nobuild full ' D' D ' 101' ' ' HOH . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 0 0 . 1 . 001 ecloud nobuild full ' D' D ' 102' ' ' HOH . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 0 0 . 1 stop_ save_