data_1buf_residue save_MolProbity _Software.Sf_category software _Software.Sf_framecode MolProbity _Software.Entry_ID ? _Software.ID 1 _Software.Name MolProbity _Software.Version 4.0 _Software.Details . save_ save_CYRANGE _Software.Sf_category software _Software.Sf_framecode CYRANGE _Software.Entry_ID ? _Software.ID 2 _Software.Name CYRANGE _Software.Version 2.0 _Software.Details . save_ save_Structure_validation_residue _Structure_validation_residue.Sf_category structure_validation _Structure_validation_residue.Sf_framecode Structure_validation_residue _Structure_validation_residue.Entry_ID ? _Structure_validation_residue.List_ID 1 _Structure_validation_residue.PDB_accession_code 1buf _Structure_validation_residue.Date_analyzed 2016-10-06 loop_ _Residue_analysis_software.Software_ID _Residue_analysis_software.Software_label _Residue_analysis_software.Method_ID _Residue_analysis_software.Method_label _Residue_analysis_software.Entry_ID _Residue_analysis_software.Structure_validation_oneline_list_ID 1 MolProbity . . ? 1 2 CYRANGE . . ? 1 stop_ loop_ _Residue_analysis.ID _Residue_analysis.PDB_model_num _Residue_analysis.Hydrogen_positions _Residue_analysis.MolProbity_flips _Residue_analysis.Cyrange_core_flag _Residue_analysis.Two_letter_chain_ID _Residue_analysis.PDB_strand_ID _Residue_analysis.PDB_residue_no _Residue_analysis.PDB_ins_code _Residue_analysis.PDB_residue_name _Residue_analysis.Assembly_ID _Residue_analysis.Entity_assembly_ID _Residue_analysis.Entity_ID _Residue_analysis.Comp_ID _Residue_analysis.Comp_index_ID _Residue_analysis.Clash_value _Residue_analysis.Clash_source_PDB_atom_name _Residue_analysis.Clash_destination_PDB_atom_name _Residue_analysis.Clash_destination_PDB_strand_ID _Residue_analysis.Clash_destination_PDB_residue_no _Residue_analysis.Clash_destination_PDB_ins_code _Residue_analysis.Clash_destination_PDB_residue_name _Residue_analysis.Cbeta_deviation_value _Residue_analysis.Rotamer_score _Residue_analysis.Rotamer_name _Residue_analysis.Ramachandran_phi _Residue_analysis.Ramachandran_psi _Residue_analysis.Ramachandran_score _Residue_analysis.Ramachandran_evaluation _Residue_analysis.Ramachandran_type _Residue_analysis.Bond_outlier_count _Residue_analysis.Worst_bond _Residue_analysis.Worst_bond_value _Residue_analysis.Worst_bond_sigma _Residue_analysis.Angle_outlier_count _Residue_analysis.Worst_angle _Residue_analysis.Worst_angle_value _Residue_analysis.Worst_angle_sigma _Residue_analysis.RNA_phosphate_perpendicular_outlier _Residue_analysis.RNA_suitness_score _Residue_analysis.RNA_suite_conformer _Residue_analysis.RNA_suite_triage _Residue_analysis.Max_b_factor _Residue_analysis.Tau_angle _Residue_analysis.Omega_dihedral _Residue_analysis.Disulfide_chi1 _Residue_analysis.Disulfide_chi2 _Residue_analysis.Disulfide_chi3 _Residue_analysis.Disulfide_ss_angle _Residue_analysis.Disulfide_ss _Residue_analysis.Disulfide_ss_angle_prime _Residue_analysis.Disulfide_chi2prime _Residue_analysis.Disulfide_chi1prime _Residue_analysis.Outlier_count_separate_geometry _Residue_analysis.Outlier_count _Residue_analysis.Entry_ID _Residue_analysis.Structure_validation_residue_list_ID . 001 nuclear orig full ' A' A ' 1' ' ' ' DC' . . . . . . . . . . . . . . . . . . . . 0 C5'--C4' 1.532 2.603 3 N19-C1'-C2' 106.485 -4.822 . . . . 0.0 . . . . . . . . . . 1 1 . 1 . 001 nuclear orig full ' A' A ' 2' ' ' ' DA' . . . . . . . . . . . . . . . . . . . . 0 O4'--C4' 1.412 -3.07 1 OP1-P-OP2 112.039 -5.041 . . . . 0.0 . . . . . . . . . . 1 1 . 1 . 001 nuclear orig full ' A' A ' 3' ' ' ' DA' . . . . . . . . . . . . . . . . . . . . 0 C3'--C2' 1.487 -3.054 2 OP1-P-OP2 112.905 -4.464 . . . . 0.0 . . . . . . . . . . 1 1 . 1 . 001 nuclear orig full ' A' A ' 4' ' ' ' DT' . . . . . . . . . . . . . . . . . . . . 0 O4'--C4' 1.411 -3.172 5 O4'-C1'-N19 113.069 6.586 . . . . 0.0 . . . . . . . . . . 1 1 . 1 . 001 nuclear orig full ' A' A ' 5' ' ' ' DT' . . . . . . . . . . . . . . . . . . . . 1 C5'--C4' 1.545 4.283 4 O4'-C1'-N19 120.305 15.631 . . . . 0.0 . . . . . . . . . . 2 1 . 1 . 001 nuclear orig full ' A' A ' 6' ' ' ' DG' . . . . . . . . . . . . . . . . . . . . 0 O4'--C4' 1.407 -3.519 3 O4'-C1'-N19 112.486 5.857 . . . . 0.0 . . . . . . . . . . 1 1 . 1 . 001 nuclear orig full ' B' B ' 7' ' ' ' DC' . . . . . . . . . . . . . . . . . . . . 0 C5'--C4' 1.531 2.504 2 N19-C1'-C2' 106.368 -4.895 . . . . 0.0 . . . . . . . . . . 1 1 . 1 . 001 nuclear orig full ' B' B ' 8' ' ' ' DA' . . . . . . . . . . . . . . . . . . . . 0 O4'--C4' 1.413 -2.971 1 OP1-P-OP2 112.096 -5.003 . . . . 0.0 . . . . . . . . . . 1 1 . 1 . 001 nuclear orig full ' B' B ' 9' ' ' ' DA' . . . . . . . . . . . . . . . . . . . . 0 C3'--C2' 1.487 -3.087 2 OP1-P-OP2 112.955 -4.43 . . . . 0.0 . . . . . . . . . . 1 1 . 1 . 001 nuclear orig full ' B' B ' 10' ' ' ' DT' . . . . . . . . . . . . . . . . . . . . 0 O4'--C4' 1.411 -3.224 5 O4'-C1'-N19 113.015 6.519 . . . . 0.0 . . . . . . . . . . 1 1 . 1 . 001 nuclear orig full ' B' B ' 11' ' ' ' DT' . . . . . . . . . . . . . . . . . . . . 1 C5'--C4' 1.546 4.313 4 O4'-C1'-N19 120.379 15.724 . . . . 0.0 . . . . . . . . . . 2 1 . 1 . 001 nuclear orig full ' B' B ' 12' ' ' ' DG' . . . . . . . . . . . . . . . . . . . . 0 O4'--C4' 1.407 -3.553 3 O4'-C1'-N19 112.494 5.867 . . . . 0.0 . . . . . . . . . . 1 1 . 1 . 001 nuclear build full ' A' A ' 1' ' ' ' DC' . . . . . . . . . . . . . . . . . . . . 0 C5'--C4' 1.532 2.603 3 N19-C1'-C2' 106.485 -4.822 . . . . 0.0 . . . . . . . . . . 1 1 . 1 . 001 nuclear build full ' A' A ' 2' ' ' ' DA' . . . . . . . . . . . . . . . . . . . . 0 O4'--C4' 1.412 -3.07 1 OP1-P-OP2 112.039 -5.041 . . . . 0.0 . . . . . . . . . . 1 1 . 1 . 001 nuclear build full ' A' A ' 3' ' ' ' DA' . . . . . . . . . . . . . . . . . . . . 0 C3'--C2' 1.487 -3.054 2 OP1-P-OP2 112.905 -4.464 . . . . 0.0 . . . . . . . . . . 1 1 . 1 . 001 nuclear build full ' A' A ' 4' ' ' ' DT' . . . . . 0.441 " H2'" ' H72' ' A' ' 5' ' ' ' DT' . . . . . . . . 0 O4'--C4' 1.411 -3.172 5 O4'-C1'-N19 113.069 6.586 . . . . 0.0 . . . . . . . . . . 2 2 . 1 . 001 nuclear build full ' A' A ' 5' ' ' ' DT' . . . . . 0.531 " H1'" ' C8 ' ' A' ' 6' ' ' ' DG' . . . . . . . . 1 C5'--C4' 1.545 4.283 4 O4'-C1'-N19 120.305 15.631 . . . . 0.0 . . . . . . . . . . 3 2 . 1 . 001 nuclear build full ' A' A ' 6' ' ' ' DG' . . . . . 0.531 ' C8 ' " H1'" ' A' ' 5' ' ' ' DT' . . . . . . . . 0 O4'--C4' 1.407 -3.519 3 O4'-C1'-N19 112.486 5.857 . . . . 0.0 . . . . . . . . . . 2 2 . 1 . 001 nuclear build full ' B' B ' 7' ' ' ' DC' . . . . . . . . . . . . . . . . . . . . 0 C5'--C4' 1.531 2.504 2 N19-C1'-C2' 106.368 -4.895 . . . . 0.0 . . . . . . . . . . 1 1 . 1 . 001 nuclear build full ' B' B ' 8' ' ' ' DA' . . . . . . . . . . . . . . . . . . . . 0 O4'--C4' 1.413 -2.971 1 OP1-P-OP2 112.096 -5.003 . . . . 0.0 . . . . . . . . . . 1 1 . 1 . 001 nuclear build full ' B' B ' 9' ' ' ' DA' . . . . . . . . . . . . . . . . . . . . 0 C3'--C2' 1.487 -3.087 2 OP1-P-OP2 112.955 -4.43 . . . . 0.0 . . . . . . . . . . 1 1 . 1 . 001 nuclear build full ' B' B ' 10' ' ' ' DT' . . . . . 0.45 " H2'" ' H72' ' B' ' 11' ' ' ' DT' . . . . . . . . 0 O4'--C4' 1.411 -3.224 5 O4'-C1'-N19 113.015 6.519 . . . . 0.0 . . . . . . . . . . 2 2 . 1 . 001 nuclear build full ' B' B ' 11' ' ' ' DT' . . . . . 0.525 " H1'" ' C8 ' ' B' ' 12' ' ' ' DG' . . . . . . . . 1 C5'--C4' 1.546 4.313 4 O4'-C1'-N19 120.379 15.724 . . . . 0.0 . . . . . . . . . . 3 2 . 1 . 001 nuclear build full ' B' B ' 12' ' ' ' DG' . . . . . 0.525 ' C8 ' " H1'" ' B' ' 11' ' ' ' DT' . . . . . . . . 0 O4'--C4' 1.407 -3.553 3 O4'-C1'-N19 112.494 5.867 . . . . 0.0 . . . . . . . . . . 2 2 . 1 . 001 nuclear nobuild full ' A' A ' 1' ' ' ' DC' . . . . . . . . . . . . . . . . . . . . 0 C5'--C4' 1.532 2.603 3 N19-C1'-C2' 106.485 -4.822 . . . . 0.0 . . . . . . . . . . 1 1 . 1 . 001 nuclear nobuild full ' A' A ' 2' ' ' ' DA' . . . . . . . . . . . . . . . . . . . . 0 O4'--C4' 1.412 -3.07 1 OP1-P-OP2 112.039 -5.041 . . . . 0.0 . . . . . . . . . . 1 1 . 1 . 001 nuclear nobuild full ' A' A ' 3' ' ' ' DA' . . . . . . . . . . . . . . . . . . . . 0 C3'--C2' 1.487 -3.054 2 OP1-P-OP2 112.905 -4.464 . . . . 0.0 . . . . . . . . . . 1 1 . 1 . 001 nuclear nobuild full ' A' A ' 4' ' ' ' DT' . . . . . 0.441 " H2'" ' H72' ' A' ' 5' ' ' ' DT' . . . . . . . . 0 O4'--C4' 1.411 -3.172 5 O4'-C1'-N19 113.069 6.586 . . . . 0.0 . . . . . . . . . . 2 2 . 1 . 001 nuclear nobuild full ' A' A ' 5' ' ' ' DT' . . . . . 0.531 " H1'" ' C8 ' ' A' ' 6' ' ' ' DG' . . . . . . . . 1 C5'--C4' 1.545 4.283 4 O4'-C1'-N19 120.305 15.631 . . . . 0.0 . . . . . . . . . . 3 2 . 1 . 001 nuclear nobuild full ' A' A ' 6' ' ' ' DG' . . . . . 0.531 ' C8 ' " H1'" ' A' ' 5' ' ' ' DT' . . . . . . . . 0 O4'--C4' 1.407 -3.519 3 O4'-C1'-N19 112.486 5.857 . . . . 0.0 . . . . . . . . . . 2 2 . 1 . 001 nuclear nobuild full ' B' B ' 7' ' ' ' DC' . . . . . . . . . . . . . . . . . . . . 0 C5'--C4' 1.531 2.504 2 N19-C1'-C2' 106.368 -4.895 . . . . 0.0 . . . . . . . . . . 1 1 . 1 . 001 nuclear nobuild full ' B' B ' 8' ' ' ' DA' . . . . . . . . . . . . . . . . . . . . 0 O4'--C4' 1.413 -2.971 1 OP1-P-OP2 112.096 -5.003 . . . . 0.0 . . . . . . . . . . 1 1 . 1 . 001 nuclear nobuild full ' B' B ' 9' ' ' ' DA' . . . . . . . . . . . . . . . . . . . . 0 C3'--C2' 1.487 -3.087 2 OP1-P-OP2 112.955 -4.43 . . . . 0.0 . . . . . . . . . . 1 1 . 1 . 001 nuclear nobuild full ' B' B ' 10' ' ' ' DT' . . . . . 0.45 " H2'" ' H72' ' B' ' 11' ' ' ' DT' . . . . . . . . 0 O4'--C4' 1.411 -3.224 5 O4'-C1'-N19 113.015 6.519 . . . . 0.0 . . . . . . . . . . 2 2 . 1 . 001 nuclear nobuild full ' B' B ' 11' ' ' ' DT' . . . . . 0.525 " H1'" ' C8 ' ' B' ' 12' ' ' ' DG' . . . . . . . . 1 C5'--C4' 1.546 4.313 4 O4'-C1'-N19 120.379 15.724 . . . . 0.0 . . . . . . . . . . 3 2 . 1 . 001 nuclear nobuild full ' B' B ' 12' ' ' ' DG' . . . . . 0.525 ' C8 ' " H1'" ' B' ' 11' ' ' ' DT' . . . . . . . . 0 O4'--C4' 1.407 -3.553 3 O4'-C1'-N19 112.494 5.867 . . . . 0.0 . . . . . . . . . . 2 2 . 1 stop_ save_