data_1vj4_residue save_MolProbity _Software.Sf_category software _Software.Sf_framecode MolProbity _Software.Entry_ID ? _Software.ID 1 _Software.Name MolProbity _Software.Version 4.0 _Software.Details . save_ save_CYRANGE _Software.Sf_category software _Software.Sf_framecode CYRANGE _Software.Entry_ID ? _Software.ID 2 _Software.Name CYRANGE _Software.Version 2.0 _Software.Details . save_ save_Structure_validation_residue _Structure_validation_residue.Sf_category structure_validation _Structure_validation_residue.Sf_framecode Structure_validation_residue _Structure_validation_residue.Entry_ID ? _Structure_validation_residue.List_ID 1 _Structure_validation_residue.PDB_accession_code 1vj4 _Structure_validation_residue.Date_analyzed 2016-10-12 loop_ _Residue_analysis_software.Software_ID _Residue_analysis_software.Software_label _Residue_analysis_software.Method_ID _Residue_analysis_software.Method_label _Residue_analysis_software.Entry_ID _Residue_analysis_software.Structure_validation_oneline_list_ID 1 MolProbity . . ? 1 2 CYRANGE . . ? 1 stop_ loop_ _Residue_analysis.ID _Residue_analysis.PDB_model_num _Residue_analysis.Hydrogen_positions _Residue_analysis.MolProbity_flips _Residue_analysis.Cyrange_core_flag _Residue_analysis.Two_letter_chain_ID _Residue_analysis.PDB_strand_ID _Residue_analysis.PDB_residue_no _Residue_analysis.PDB_ins_code _Residue_analysis.PDB_residue_name _Residue_analysis.Assembly_ID _Residue_analysis.Entity_assembly_ID _Residue_analysis.Entity_ID _Residue_analysis.Comp_ID _Residue_analysis.Comp_index_ID _Residue_analysis.Clash_value _Residue_analysis.Clash_source_PDB_atom_name _Residue_analysis.Clash_destination_PDB_atom_name _Residue_analysis.Clash_destination_PDB_strand_ID _Residue_analysis.Clash_destination_PDB_residue_no _Residue_analysis.Clash_destination_PDB_ins_code _Residue_analysis.Clash_destination_PDB_residue_name _Residue_analysis.Cbeta_deviation_value _Residue_analysis.Rotamer_score _Residue_analysis.Rotamer_name _Residue_analysis.Ramachandran_phi _Residue_analysis.Ramachandran_psi _Residue_analysis.Ramachandran_score _Residue_analysis.Ramachandran_evaluation _Residue_analysis.Ramachandran_type _Residue_analysis.Bond_outlier_count _Residue_analysis.Worst_bond _Residue_analysis.Worst_bond_value _Residue_analysis.Worst_bond_sigma _Residue_analysis.Angle_outlier_count _Residue_analysis.Worst_angle _Residue_analysis.Worst_angle_value _Residue_analysis.Worst_angle_sigma _Residue_analysis.RNA_phosphate_perpendicular_outlier _Residue_analysis.RNA_suitness_score _Residue_analysis.RNA_suite_conformer _Residue_analysis.RNA_suite_triage _Residue_analysis.Max_b_factor _Residue_analysis.Tau_angle _Residue_analysis.Omega_dihedral _Residue_analysis.Disulfide_chi1 _Residue_analysis.Disulfide_chi2 _Residue_analysis.Disulfide_chi3 _Residue_analysis.Disulfide_ss_angle _Residue_analysis.Disulfide_ss _Residue_analysis.Disulfide_ss_angle_prime _Residue_analysis.Disulfide_chi2prime _Residue_analysis.Disulfide_chi1prime _Residue_analysis.Outlier_count_separate_geometry _Residue_analysis.Outlier_count _Residue_analysis.Entry_ID _Residue_analysis.Structure_validation_residue_list_ID . 001 ecloud orig full ' A' A ' 1' ' ' ' DG' . . . . . 1.401 " O5'" " C5'" ' A' ' 1' ' ' ' DG' . . . . . . . . 2 O5'--C5' 1.693 15.807 0 O5'-C5'-C4' 115.473 3.766 . . . . 10.0 . . . . . . . . . . 2 2 . 1 . 001 ecloud orig full ' A' A ' 2' ' ' ' DG' . . . . . . . . . . . . . . . . . . . . 0 P--O3' 1.621 1.195 1 P-O3'-C3' 114.64 -4.217 . . . . 10.0 . . . . . . . . . . 1 1 . 1 . 001 ecloud orig full ' A' A ' 3' ' ' ' DT' . . . . . . . . . . . . . . . . . . . . 2 P--O3' 1.555 -4.308 1 O4'-C4'-C3' 100.509 -5.091 . . . . 10.0 . . . . . . . . . . 2 1 . 1 . 001 ecloud orig full ' A' A ' 4' ' ' ' DA' . . . . . . . . . . . . . . . . . . . . 0 O4'--C4' 1.434 -1.078 1 P-O3'-C3' 112.4 -6.084 . . . . 10.0 . . . . . . . . . . 1 1 . 1 . 001 ecloud orig full ' A' A ' 5' ' ' ' DT' . . . . . . . . . . . . . . . . . . . . 1 O4'--C4' 1.511 5.88 1 O4'-C4'-C3' 99.914 -5.686 . . . . 10.0 . . . . . . . . . . 2 1 . 1 . 001 ecloud orig full ' A' A ' 6' ' ' ' DA' . . . . . . . . . . . . . . . . . . . . 2 O4'--C4' 1.564 10.744 4 O4'-C4'-C3' 98.599 -7.001 . . . . 10.0 . . . . . . . . . . 2 1 . 1 . 001 ecloud orig full ' A' A ' 7' ' ' ' DC' . . . . . . . . . . . . . . . . . . . . 1 O4'--C4' 1.533 7.95 2 O4'-C4'-C3' 99.332 -6.268 . . . . 10.0 . . . . . . . . . . 2 1 . 1 . 001 ecloud orig full ' A' A ' 8' ' ' ' DC' . . . . . . . . . . . . . . . . . . . . 1 O4'--C4' 1.536 8.186 1 O4'-C4'-C3' 98.302 -7.298 . . . . 10.0 . . . . . . . . . . 2 1 . 1 . 001 ecloud orig full ' B' B ' 9' ' ' ' DG' . . . . . . . . . . . . . . . . . . . . 1 O4'--C4' 1.515 6.238 1 O4'-C4'-C3' 101.102 -4.498 . . . . 10.0 . . . . . . . . . . 2 1 . 1 . 001 ecloud orig full ' B' B ' 10' ' ' ' DG' . . . . . . . . . . . . . . . . . . . . 0 O5'--C5' 1.402 -2.362 1 O4'-C1'-N19 103.673 -5.158 . . . . 10.0 . . . . . . . . . . 1 1 . 1 . 001 ecloud orig full ' B' B ' 11' ' ' ' DT' . . . . . . . . . . . . . . . . . . . . 0 O4'--C4' 1.484 3.43 1 P-O5'-C5' 112.457 -5.277 . . . . 10.0 . . . . . . . . . . 1 1 . 1 . 001 ecloud orig full ' B' B ' 12' ' ' ' DA' . . . . . . . . . . . . . . . . . . . . 0 P--O3' 1.591 -1.348 0 O4'-C1'-N19 105.051 -3.436 . . . . 10.0 . . . . . . . . . . 0 0 . 1 . 001 ecloud orig full ' B' B ' 13' ' ' ' DT' . . . . . . . . . . . . . . . . . . . . 0 P--O3' 1.577 -2.512 1 O4'-C4'-C3' 101.398 -4.202 . . . . 10.0 . . . . . . . . . . 1 1 . 1 . 001 ecloud orig full ' B' B ' 14' ' ' ' DA' . . . . . . . . . . . . . . . . . . . . 1 O4'--C4' 1.516 6.372 1 O4'-C4'-C3' 98.454 -7.146 . . . . 10.0 . . . . . . . . . . 2 1 . 1 . 001 ecloud orig full ' B' B ' 15' ' ' ' DC' . . . . . . . . . . . . . . . . . . . . 1 O5'--C5' 1.343 -6.06 1 O5'-C5'-C4' 117.445 5.175 . . . . 10.0 . . . . . . . . . . 2 1 . 1 . 001 ecloud orig full ' B' B ' 16' ' ' ' DC' . . . . . . . . . . . . . . . . . . . . 1 P--O3' 1.54 -5.59 6 P-O3'-C3' 132.228 10.44 . . . . 10.0 . . . . . . . . . . 2 1 . 1 . 001 ecloud build full ' A' A ' 1' ' ' ' DG' . . . . . 1.401 " O5'" " C5'" ' A' ' 1' ' ' ' DG' . . . . . . . . 2 O5'--C5' 1.693 15.807 0 O5'-C5'-C4' 115.473 3.766 . . . . 10.0 . . . . . . . . . . 2 2 . 1 . 001 ecloud build full ' A' A ' 2' ' ' ' DG' . . . . . . . . . . . . . . . . . . . . 0 P--O3' 1.621 1.195 1 P-O3'-C3' 114.64 -4.217 . . . . 10.0 . . . . . . . . . . 1 1 . 1 . 001 ecloud build full ' A' A ' 3' ' ' ' DT' . . . . . . . . . . . . . . . . . . . . 2 P--O3' 1.555 -4.308 1 O4'-C4'-C3' 100.509 -5.091 . . . . 10.0 . . . . . . . . . . 2 1 . 1 . 001 ecloud build full ' A' A ' 4' ' ' ' DA' . . . . . . . . . . . . . . . . . . . . 0 O4'--C4' 1.434 -1.078 1 P-O3'-C3' 112.4 -6.084 . . . . 10.0 . . . . . . . . . . 1 1 . 1 . 001 ecloud build full ' A' A ' 5' ' ' ' DT' . . . . . . . . . . . . . . . . . . . . 1 O4'--C4' 1.511 5.88 1 O4'-C4'-C3' 99.914 -5.686 . . . . 10.0 . . . . . . . . . . 2 1 . 1 . 001 ecloud build full ' A' A ' 6' ' ' ' DA' . . . . . . . . . . . . . . . . . . . . 2 O4'--C4' 1.564 10.744 4 O4'-C4'-C3' 98.599 -7.001 . . . . 10.0 . . . . . . . . . . 2 1 . 1 . 001 ecloud build full ' A' A ' 7' ' ' ' DC' . . . . . . . . . . . . . . . . . . . . 1 O4'--C4' 1.533 7.95 2 O4'-C4'-C3' 99.332 -6.268 . . . . 10.0 . . . . . . . . . . 2 1 . 1 . 001 ecloud build full ' A' A ' 8' ' ' ' DC' . . . . . . . . . . . . . . . . . . . . 1 O4'--C4' 1.536 8.186 1 O4'-C4'-C3' 98.302 -7.298 . . . . 10.0 . . . . . . . . . . 2 1 . 1 . 001 ecloud build full ' B' B ' 9' ' ' ' DG' . . . . . . . . . . . . . . . . . . . . 1 O4'--C4' 1.515 6.238 1 O4'-C4'-C3' 101.102 -4.498 . . . . 10.0 . . . . . . . . . . 2 1 . 1 . 001 ecloud build full ' B' B ' 10' ' ' ' DG' . . . . . . . . . . . . . . . . . . . . 0 O5'--C5' 1.402 -2.362 1 O4'-C1'-N19 103.673 -5.158 . . . . 10.0 . . . . . . . . . . 1 1 . 1 . 001 ecloud build full ' B' B ' 11' ' ' ' DT' . . . . . . . . . . . . . . . . . . . . 0 O4'--C4' 1.484 3.43 1 P-O5'-C5' 112.457 -5.277 . . . . 10.0 . . . . . . . . . . 1 1 . 1 . 001 ecloud build full ' B' B ' 12' ' ' ' DA' . . . . . 0.443 " H2'" ' C6 ' ' B' ' 13' ' ' ' DT' . . . . . . . . 0 P--O3' 1.591 -1.348 0 O4'-C1'-N19 105.051 -3.436 . . . . 10.0 . . . . . . . . . . 1 1 . 1 . 001 ecloud build full ' B' B ' 13' ' ' ' DT' . . . . . 0.443 ' C6 ' " H2'" ' B' ' 12' ' ' ' DA' . . . . . . . . 0 P--O3' 1.577 -2.512 1 O4'-C4'-C3' 101.398 -4.202 . . . . 10.0 . . . . . . . . . . 2 2 . 1 . 001 ecloud build full ' B' B ' 14' ' ' ' DA' . . . . . . . . . . . . . . . . . . . . 1 O4'--C4' 1.516 6.372 1 O4'-C4'-C3' 98.454 -7.146 . . . . 10.0 . . . . . . . . . . 2 1 . 1 . 001 ecloud build full ' B' B ' 15' ' ' ' DC' . . . . . . . . . . . . . . . . . . . . 1 O5'--C5' 1.343 -6.06 1 O5'-C5'-C4' 117.445 5.175 . . . . 10.0 . . . . . . . . . . 2 1 . 1 . 001 ecloud build full ' B' B ' 16' ' ' ' DC' . . . . . . . . . . . . . . . . . . . . 1 P--O3' 1.54 -5.59 6 P-O3'-C3' 132.228 10.44 . . . . 10.0 . . . . . . . . . . 2 1 . 1 . 001 ecloud nobuild full ' A' A ' 1' ' ' ' DG' . . . . . 1.401 " O5'" " C5'" ' A' ' 1' ' ' ' DG' . . . . . . . . 2 O5'--C5' 1.693 15.807 0 O5'-C5'-C4' 115.473 3.766 . . . . 10.0 . . . . . . . . . . 2 2 . 1 . 001 ecloud nobuild full ' A' A ' 2' ' ' ' DG' . . . . . . . . . . . . . . . . . . . . 0 P--O3' 1.621 1.195 1 P-O3'-C3' 114.64 -4.217 . . . . 10.0 . . . . . . . . . . 1 1 . 1 . 001 ecloud nobuild full ' A' A ' 3' ' ' ' DT' . . . . . . . . . . . . . . . . . . . . 2 P--O3' 1.555 -4.308 1 O4'-C4'-C3' 100.509 -5.091 . . . . 10.0 . . . . . . . . . . 2 1 . 1 . 001 ecloud nobuild full ' A' A ' 4' ' ' ' DA' . . . . . . . . . . . . . . . . . . . . 0 O4'--C4' 1.434 -1.078 1 P-O3'-C3' 112.4 -6.084 . . . . 10.0 . . . . . . . . . . 1 1 . 1 . 001 ecloud nobuild full ' A' A ' 5' ' ' ' DT' . . . . . . . . . . . . . . . . . . . . 1 O4'--C4' 1.511 5.88 1 O4'-C4'-C3' 99.914 -5.686 . . . . 10.0 . . . . . . . . . . 2 1 . 1 . 001 ecloud nobuild full ' A' A ' 6' ' ' ' DA' . . . . . . . . . . . . . . . . . . . . 2 O4'--C4' 1.564 10.744 4 O4'-C4'-C3' 98.599 -7.001 . . . . 10.0 . . . . . . . . . . 2 1 . 1 . 001 ecloud nobuild full ' A' A ' 7' ' ' ' DC' . . . . . . . . . . . . . . . . . . . . 1 O4'--C4' 1.533 7.95 2 O4'-C4'-C3' 99.332 -6.268 . . . . 10.0 . . . . . . . . . . 2 1 . 1 . 001 ecloud nobuild full ' A' A ' 8' ' ' ' DC' . . . . . . . . . . . . . . . . . . . . 1 O4'--C4' 1.536 8.186 1 O4'-C4'-C3' 98.302 -7.298 . . . . 10.0 . . . . . . . . . . 2 1 . 1 . 001 ecloud nobuild full ' B' B ' 9' ' ' ' DG' . . . . . . . . . . . . . . . . . . . . 1 O4'--C4' 1.515 6.238 1 O4'-C4'-C3' 101.102 -4.498 . . . . 10.0 . . . . . . . . . . 2 1 . 1 . 001 ecloud nobuild full ' B' B ' 10' ' ' ' DG' . . . . . . . . . . . . . . . . . . . . 0 O5'--C5' 1.402 -2.362 1 O4'-C1'-N19 103.673 -5.158 . . . . 10.0 . . . . . . . . . . 1 1 . 1 . 001 ecloud nobuild full ' B' B ' 11' ' ' ' DT' . . . . . . . . . . . . . . . . . . . . 0 O4'--C4' 1.484 3.43 1 P-O5'-C5' 112.457 -5.277 . . . . 10.0 . . . . . . . . . . 1 1 . 1 . 001 ecloud nobuild full ' B' B ' 12' ' ' ' DA' . . . . . 0.443 " H2'" ' C6 ' ' B' ' 13' ' ' ' DT' . . . . . . . . 0 P--O3' 1.591 -1.348 0 O4'-C1'-N19 105.051 -3.436 . . . . 10.0 . . . . . . . . . . 1 1 . 1 . 001 ecloud nobuild full ' B' B ' 13' ' ' ' DT' . . . . . 0.443 ' C6 ' " H2'" ' B' ' 12' ' ' ' DA' . . . . . . . . 0 P--O3' 1.577 -2.512 1 O4'-C4'-C3' 101.398 -4.202 . . . . 10.0 . . . . . . . . . . 2 2 . 1 . 001 ecloud nobuild full ' B' B ' 14' ' ' ' DA' . . . . . . . . . . . . . . . . . . . . 1 O4'--C4' 1.516 6.372 1 O4'-C4'-C3' 98.454 -7.146 . . . . 10.0 . . . . . . . . . . 2 1 . 1 . 001 ecloud nobuild full ' B' B ' 15' ' ' ' DC' . . . . . . . . . . . . . . . . . . . . 1 O5'--C5' 1.343 -6.06 1 O5'-C5'-C4' 117.445 5.175 . . . . 10.0 . . . . . . . . . . 2 1 . 1 . 001 ecloud nobuild full ' B' B ' 16' ' ' ' DC' . . . . . . . . . . . . . . . . . . . . 1 P--O3' 1.54 -5.59 6 P-O3'-C3' 132.228 10.44 . . . . 10.0 . . . . . . . . . . 2 1 . 1 stop_ save_