data_1u01_residue save_MolProbity _Software.Sf_category software _Software.Sf_framecode MolProbity _Software.Entry_ID ? _Software.ID 1 _Software.Name MolProbity _Software.Version 4.0 _Software.Details . save_ save_CYRANGE _Software.Sf_category software _Software.Sf_framecode CYRANGE _Software.Entry_ID ? _Software.ID 2 _Software.Name CYRANGE _Software.Version 2.0 _Software.Details . save_ save_Structure_validation_residue _Structure_validation_residue.Sf_category structure_validation _Structure_validation_residue.Sf_framecode Structure_validation_residue _Structure_validation_residue.Entry_ID ? _Structure_validation_residue.List_ID 1 _Structure_validation_residue.PDB_accession_code 1u01 _Structure_validation_residue.Date_analyzed 2016-10-07 loop_ _Residue_analysis_software.Software_ID _Residue_analysis_software.Software_label _Residue_analysis_software.Method_ID _Residue_analysis_software.Method_label _Residue_analysis_software.Entry_ID _Residue_analysis_software.Structure_validation_oneline_list_ID 1 MolProbity . . ? 1 2 CYRANGE . . ? 1 stop_ loop_ _Residue_analysis.ID _Residue_analysis.PDB_model_num _Residue_analysis.Hydrogen_positions _Residue_analysis.MolProbity_flips _Residue_analysis.Cyrange_core_flag _Residue_analysis.Two_letter_chain_ID _Residue_analysis.PDB_strand_ID _Residue_analysis.PDB_residue_no _Residue_analysis.PDB_ins_code _Residue_analysis.PDB_residue_name _Residue_analysis.Assembly_ID _Residue_analysis.Entity_assembly_ID _Residue_analysis.Entity_ID _Residue_analysis.Comp_ID _Residue_analysis.Comp_index_ID _Residue_analysis.Clash_value _Residue_analysis.Clash_source_PDB_atom_name _Residue_analysis.Clash_destination_PDB_atom_name _Residue_analysis.Clash_destination_PDB_strand_ID _Residue_analysis.Clash_destination_PDB_residue_no _Residue_analysis.Clash_destination_PDB_ins_code _Residue_analysis.Clash_destination_PDB_residue_name _Residue_analysis.Cbeta_deviation_value _Residue_analysis.Rotamer_score _Residue_analysis.Rotamer_name _Residue_analysis.Ramachandran_phi _Residue_analysis.Ramachandran_psi _Residue_analysis.Ramachandran_score _Residue_analysis.Ramachandran_evaluation _Residue_analysis.Ramachandran_type _Residue_analysis.Bond_outlier_count _Residue_analysis.Worst_bond _Residue_analysis.Worst_bond_value _Residue_analysis.Worst_bond_sigma _Residue_analysis.Angle_outlier_count _Residue_analysis.Worst_angle _Residue_analysis.Worst_angle_value _Residue_analysis.Worst_angle_sigma _Residue_analysis.RNA_phosphate_perpendicular_outlier _Residue_analysis.RNA_suitness_score _Residue_analysis.RNA_suite_conformer _Residue_analysis.RNA_suite_triage _Residue_analysis.Max_b_factor _Residue_analysis.Tau_angle _Residue_analysis.Omega_dihedral _Residue_analysis.Disulfide_chi1 _Residue_analysis.Disulfide_chi2 _Residue_analysis.Disulfide_chi3 _Residue_analysis.Disulfide_ss_angle _Residue_analysis.Disulfide_ss _Residue_analysis.Disulfide_ss_angle_prime _Residue_analysis.Disulfide_chi2prime _Residue_analysis.Disulfide_chi1prime _Residue_analysis.Outlier_count_separate_geometry _Residue_analysis.Outlier_count _Residue_analysis.Entry_ID _Residue_analysis.Structure_validation_residue_list_ID . 001 nuclear orig full ' A' A ' 1' ' ' ' DG' . . . . . . . . . . . . . . . . . . . . 0 O4'--C4' 1.426 -1.801 2 C5'-C4'-C3' 107.361 -4.893 . . . . 1.5900000000000001 . . . . . . . . . . 1 1 . 1 . 001 nuclear orig full ' A' A ' 2' ' ' ' DC' . . . . . . . . . . . . . . . . . . . . 0 C5'--C4' 1.529 2.24 1 C5'-C4'-C3' 107.242 -4.972 . . . . 1.04 . . . . . . . . . . 1 1 . 1 . 001 nuclear orig full ' A' A ' 3' ' ' ' DG' . . . . . 0.602 H2'' ' OP2' ' A' ' 4' ' ' XTR . . . . . . . . 0 P--O5' 1.611 1.844 2 O4'-C1'-N19 112.397 5.747 . . . . 0.89000000000000001 . . . . . . . . . . 2 2 . 1 . 001 nuclear orig full ' A' A ' 4' ' ' XTR . . . . . 0.659 " O5'" " H2'" ' A' ' 4' ' ' XTR . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 1 1 . 1 . 001 nuclear orig full ' A' A ' 5' ' ' ' DG' . . . . . 0.44 H2'' ' C6 ' ' A' ' 6' ' ' ' DC' . . . . . . . . 0 O4'--C4' 1.426 -1.814 2 C5'-C4'-C3' 106.781 -5.279 . . . . 0.81999999999999995 . . . . . . . . . . 2 2 . 1 . 001 nuclear orig full ' A' A ' 6' ' ' ' DC' . . . . . 0.44 ' C6 ' H2'' ' A' ' 5' ' ' ' DG' . . . . . . . . 0 C5'--C4' 1.529 2.251 2 C5'-C4'-C3' 107.446 -4.836 . . . . 0.88 . . . . . . . . . . 2 2 . 1 . 001 nuclear orig full ' A' A ' 7' ' ' ' DG' . . . . . . . . . . . . . . . . . . . . 0 P--O5' 1.609 1.639 2 C5'-C4'-C3' 107.181 -5.012 . . . . 0.88 . . . . . . . . . . 1 1 . 1 . 001 nuclear orig full ' B' B ' 8' ' ' ' DC' . . . . . 0.419 " H3'" HO5' ' B' ' 8' ' ' ' DC' . . . . . . . . 0 C5'--C4' 1.531 2.452 2 C5'-C4'-C3' 107.584 -4.744 . . . . 1.3700000000000001 . . . . . . . . . . 2 2 . 1 . 001 nuclear orig full ' B' B ' 9' ' ' ' DG' . . . . . . . . . . . . . . . . . . . . 0 P--O5' 1.61 1.727 2 C5'-C4'-C3' 107.126 -5.049 . . . . 1.02 . . . . . . . . . . 1 1 . 1 . 001 nuclear orig full ' B' B ' 10' ' ' ' DC' . . . . . . . . . . . . . . . . . . . . 0 C5'--C4' 1.528 2.085 2 C5'-C4'-C3' 107.199 -5.001 . . . . 0.79000000000000004 . . . . . . . . . . 1 1 . 1 . 001 nuclear orig full ' B' B ' 11' ' ' ' DA' . . . . . 0.407 ' C2 ' ' C2 ' ' A' ' 5' ' ' ' DG' . . . . . . . . 0 C5'--C4' 1.527 2.025 2 C5'-C4'-C3' 107.11 -5.06 . . . . 0.80000000000000004 . . . . . . . . . . 2 2 . 1 . 001 nuclear orig full ' B' B ' 12' ' ' ' DC' . . . . . . . . . . . . . . . . . . . . 0 O4'--C4' 1.426 -1.862 1 C5'-C4'-C3' 107.173 -5.018 . . . . 0.67000000000000004 . . . . . . . . . . 1 1 . 1 . 001 nuclear orig full ' B' B ' 13' ' ' ' DG' . . . . . . . . . . . . . . . . . . . . 0 O4'--C4' 1.426 -1.794 2 C5'-C4'-C3' 107.288 -4.941 . . . . 0.83999999999999997 . . . . . . . . . . 1 1 . 1 . 001 nuclear orig full ' B' B ' 14' ' ' ' DC' . . . . . . . . . . . . . . . . . . . . 0 C5'--C4' 1.528 2.136 2 C5'-C4'-C3' 107.281 -4.946 . . . . 1.05 . . . . . . . . . . 1 1 . 1 . 001 nuclear build full ' A' A ' 1' ' ' ' DG' . . . . . . . . . . . . . . . . . . . . 0 O4'--C4' 1.426 -1.801 2 C5'-C4'-C3' 107.361 -4.893 . . . . 1.3200000000000001 . . . . . . . . . . 1 1 . 1 . 001 nuclear build full ' A' A ' 2' ' ' ' DC' . . . . . . . . . . . . . . . . . . . . 0 C5'--C4' 1.529 2.24 1 C5'-C4'-C3' 107.242 -4.972 . . . . 1.04 . . . . . . . . . . 1 1 . 1 . 001 nuclear build full ' A' A ' 3' ' ' ' DG' . . . . . 0.617 H2'' ' OP2' ' A' ' 4' ' ' XTR . . . . . . . . 0 P--O5' 1.611 1.844 2 O4'-C1'-N19 112.397 5.747 . . . . 0.89000000000000001 . . . . . . . . . . 2 2 . 1 . 001 nuclear build full ' A' A ' 4' ' ' XTR . . . . . 0.632 " O5'" " H2'" ' A' ' 4' ' ' XTR . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 1 1 . 1 . 001 nuclear build full ' A' A ' 5' ' ' ' DG' . . . . . 0.448 H2'' ' C6 ' ' A' ' 6' ' ' ' DC' . . . . . . . . 0 O4'--C4' 1.426 -1.814 2 C5'-C4'-C3' 106.781 -5.279 . . . . 0.81999999999999995 . . . . . . . . . . 2 2 . 1 . 001 nuclear build full ' A' A ' 6' ' ' ' DC' . . . . . 0.448 ' C6 ' H2'' ' A' ' 5' ' ' ' DG' . . . . . . . . 0 C5'--C4' 1.529 2.251 2 C5'-C4'-C3' 107.446 -4.836 . . . . 0.88 . . . . . . . . . . 2 2 . 1 . 001 nuclear build full ' A' A ' 7' ' ' ' DG' . . . . . . . . . . . . . . . . . . . . 0 P--O5' 1.609 1.639 2 C5'-C4'-C3' 107.181 -5.012 . . . . 0.88 . . . . . . . . . . 1 1 . 1 . 001 nuclear build full ' B' B ' 8' ' ' ' DC' . . . . . . . . . . . . . . . . . . . . 0 C5'--C4' 1.531 2.452 2 C5'-C4'-C3' 107.584 -4.744 . . . . 1.1200000000000001 . . . . . . . . . . 1 1 . 1 . 001 nuclear build full ' B' B ' 9' ' ' ' DG' . . . . . . . . . . . . . . . . . . . . 0 P--O5' 1.61 1.727 2 C5'-C4'-C3' 107.126 -5.049 . . . . 1.02 . . . . . . . . . . 1 1 . 1 . 001 nuclear build full ' B' B ' 10' ' ' ' DC' . . . . . . . . . . . . . . . . . . . . 0 C5'--C4' 1.528 2.085 2 C5'-C4'-C3' 107.199 -5.001 . . . . 0.79000000000000004 . . . . . . . . . . 1 1 . 1 . 001 nuclear build full ' B' B ' 11' ' ' ' DA' . . . . . 0.407 ' C2 ' ' C2 ' ' A' ' 5' ' ' ' DG' . . . . . . . . 0 C5'--C4' 1.527 2.025 2 C5'-C4'-C3' 107.11 -5.06 . . . . 0.80000000000000004 . . . . . . . . . . 2 2 . 1 . 001 nuclear build full ' B' B ' 12' ' ' ' DC' . . . . . . . . . . . . . . . . . . . . 0 O4'--C4' 1.426 -1.862 1 C5'-C4'-C3' 107.173 -5.018 . . . . 0.67000000000000004 . . . . . . . . . . 1 1 . 1 . 001 nuclear build full ' B' B ' 13' ' ' ' DG' . . . . . . . . . . . . . . . . . . . . 0 O4'--C4' 1.426 -1.794 2 C5'-C4'-C3' 107.288 -4.941 . . . . 0.80000000000000004 . . . . . . . . . . 1 1 . 1 . 001 nuclear build full ' B' B ' 14' ' ' ' DC' . . . . . . . . . . . . . . . . . . . . 0 C5'--C4' 1.528 2.136 2 C5'-C4'-C3' 107.281 -4.946 . . . . 1.05 . . . . . . . . . . 1 1 . 1 . 001 nuclear nobuild full ' A' A ' 1' ' ' ' DG' . . . . . . . . . . . . . . . . . . . . 0 O4'--C4' 1.426 -1.801 2 C5'-C4'-C3' 107.361 -4.893 . . . . 1.3200000000000001 . . . . . . . . . . 1 1 . 1 . 001 nuclear nobuild full ' A' A ' 2' ' ' ' DC' . . . . . . . . . . . . . . . . . . . . 0 C5'--C4' 1.529 2.24 1 C5'-C4'-C3' 107.242 -4.972 . . . . 1.04 . . . . . . . . . . 1 1 . 1 . 001 nuclear nobuild full ' A' A ' 3' ' ' ' DG' . . . . . 0.617 H2'' ' OP2' ' A' ' 4' ' ' XTR . . . . . . . . 0 P--O5' 1.611 1.844 2 O4'-C1'-N19 112.397 5.747 . . . . 0.89000000000000001 . . . . . . . . . . 2 2 . 1 . 001 nuclear nobuild full ' A' A ' 4' ' ' XTR . . . . . 0.632 " O5'" " H2'" ' A' ' 4' ' ' XTR . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 1 1 . 1 . 001 nuclear nobuild full ' A' A ' 5' ' ' ' DG' . . . . . 0.448 H2'' ' C6 ' ' A' ' 6' ' ' ' DC' . . . . . . . . 0 O4'--C4' 1.426 -1.814 2 C5'-C4'-C3' 106.781 -5.279 . . . . 0.81999999999999995 . . . . . . . . . . 2 2 . 1 . 001 nuclear nobuild full ' A' A ' 6' ' ' ' DC' . . . . . 0.448 ' C6 ' H2'' ' A' ' 5' ' ' ' DG' . . . . . . . . 0 C5'--C4' 1.529 2.251 2 C5'-C4'-C3' 107.446 -4.836 . . . . 0.88 . . . . . . . . . . 2 2 . 1 . 001 nuclear nobuild full ' A' A ' 7' ' ' ' DG' . . . . . . . . . . . . . . . . . . . . 0 P--O5' 1.609 1.639 2 C5'-C4'-C3' 107.181 -5.012 . . . . 0.88 . . . . . . . . . . 1 1 . 1 . 001 nuclear nobuild full ' B' B ' 8' ' ' ' DC' . . . . . . . . . . . . . . . . . . . . 0 C5'--C4' 1.531 2.452 2 C5'-C4'-C3' 107.584 -4.744 . . . . 1.1200000000000001 . . . . . . . . . . 1 1 . 1 . 001 nuclear nobuild full ' B' B ' 9' ' ' ' DG' . . . . . . . . . . . . . . . . . . . . 0 P--O5' 1.61 1.727 2 C5'-C4'-C3' 107.126 -5.049 . . . . 1.02 . . . . . . . . . . 1 1 . 1 . 001 nuclear nobuild full ' B' B ' 10' ' ' ' DC' . . . . . . . . . . . . . . . . . . . . 0 C5'--C4' 1.528 2.085 2 C5'-C4'-C3' 107.199 -5.001 . . . . 0.79000000000000004 . . . . . . . . . . 1 1 . 1 . 001 nuclear nobuild full ' B' B ' 11' ' ' ' DA' . . . . . 0.407 ' C2 ' ' C2 ' ' A' ' 5' ' ' ' DG' . . . . . . . . 0 C5'--C4' 1.527 2.025 2 C5'-C4'-C3' 107.11 -5.06 . . . . 0.80000000000000004 . . . . . . . . . . 2 2 . 1 . 001 nuclear nobuild full ' B' B ' 12' ' ' ' DC' . . . . . . . . . . . . . . . . . . . . 0 O4'--C4' 1.426 -1.862 1 C5'-C4'-C3' 107.173 -5.018 . . . . 0.67000000000000004 . . . . . . . . . . 1 1 . 1 . 001 nuclear nobuild full ' B' B ' 13' ' ' ' DG' . . . . . . . . . . . . . . . . . . . . 0 O4'--C4' 1.426 -1.794 2 C5'-C4'-C3' 107.288 -4.941 . . . . 0.80000000000000004 . . . . . . . . . . 1 1 . 1 . 001 nuclear nobuild full ' B' B ' 14' ' ' ' DC' . . . . . . . . . . . . . . . . . . . . 0 C5'--C4' 1.528 2.136 2 C5'-C4'-C3' 107.281 -4.946 . . . . 1.05 . . . . . . . . . . 1 1 . 1 stop_ save_