data_1ql5_residue save_MolProbity _Software.Sf_category software _Software.Sf_framecode MolProbity _Software.Entry_ID ? _Software.ID 1 _Software.Name MolProbity _Software.Version 4.0 _Software.Details . save_ save_CYRANGE _Software.Sf_category software _Software.Sf_framecode CYRANGE _Software.Entry_ID ? _Software.ID 2 _Software.Name CYRANGE _Software.Version 2.0 _Software.Details . save_ save_Structure_validation_residue _Structure_validation_residue.Sf_category structure_validation _Structure_validation_residue.Sf_framecode Structure_validation_residue _Structure_validation_residue.Entry_ID ? _Structure_validation_residue.List_ID 1 _Structure_validation_residue.PDB_accession_code 1ql5 _Structure_validation_residue.Date_analyzed 2016-10-07 loop_ _Residue_analysis_software.Software_ID _Residue_analysis_software.Software_label _Residue_analysis_software.Method_ID _Residue_analysis_software.Method_label _Residue_analysis_software.Entry_ID _Residue_analysis_software.Structure_validation_oneline_list_ID 1 MolProbity . . ? 1 2 CYRANGE . . ? 1 stop_ loop_ _Residue_analysis.ID _Residue_analysis.PDB_model_num _Residue_analysis.Hydrogen_positions _Residue_analysis.MolProbity_flips _Residue_analysis.Cyrange_core_flag _Residue_analysis.Two_letter_chain_ID _Residue_analysis.PDB_strand_ID _Residue_analysis.PDB_residue_no _Residue_analysis.PDB_ins_code _Residue_analysis.PDB_residue_name _Residue_analysis.Assembly_ID _Residue_analysis.Entity_assembly_ID _Residue_analysis.Entity_ID _Residue_analysis.Comp_ID _Residue_analysis.Comp_index_ID _Residue_analysis.Clash_value _Residue_analysis.Clash_source_PDB_atom_name _Residue_analysis.Clash_destination_PDB_atom_name _Residue_analysis.Clash_destination_PDB_strand_ID _Residue_analysis.Clash_destination_PDB_residue_no _Residue_analysis.Clash_destination_PDB_ins_code _Residue_analysis.Clash_destination_PDB_residue_name _Residue_analysis.Cbeta_deviation_value _Residue_analysis.Rotamer_score _Residue_analysis.Rotamer_name _Residue_analysis.Ramachandran_phi _Residue_analysis.Ramachandran_psi _Residue_analysis.Ramachandran_score _Residue_analysis.Ramachandran_evaluation _Residue_analysis.Ramachandran_type _Residue_analysis.Bond_outlier_count _Residue_analysis.Worst_bond _Residue_analysis.Worst_bond_value _Residue_analysis.Worst_bond_sigma _Residue_analysis.Angle_outlier_count _Residue_analysis.Worst_angle _Residue_analysis.Worst_angle_value _Residue_analysis.Worst_angle_sigma _Residue_analysis.RNA_phosphate_perpendicular_outlier _Residue_analysis.RNA_suitness_score _Residue_analysis.RNA_suite_conformer _Residue_analysis.RNA_suite_triage _Residue_analysis.Max_b_factor _Residue_analysis.Tau_angle _Residue_analysis.Omega_dihedral _Residue_analysis.Disulfide_chi1 _Residue_analysis.Disulfide_chi2 _Residue_analysis.Disulfide_chi3 _Residue_analysis.Disulfide_ss_angle _Residue_analysis.Disulfide_ss _Residue_analysis.Disulfide_ss_angle_prime _Residue_analysis.Disulfide_chi2prime _Residue_analysis.Disulfide_chi1prime _Residue_analysis.Outlier_count_separate_geometry _Residue_analysis.Outlier_count _Residue_analysis.Entry_ID _Residue_analysis.Structure_validation_residue_list_ID . 001 nuclear orig full ' A' A ' 1' ' ' ' DC' . . . . . . . . . . . . . . . . . . . . 0 O4'--C4' 1.471 2.284 1 O4'-C1'-N19 112.643 6.054 . . . . 1.04 . . . . . . . . . . 1 1 . 1 . 001 nuclear orig full ' A' A ' 2' ' ' ' DG' . . . . . . . . . . . . . . . . . . . . 0 C3'--C2' 1.537 1.885 1 P-O5'-C5' 129.108 5.13 . . . . 0.72999999999999998 . . . . . . . . . . 1 1 . 1 . 001 nuclear orig full ' A' A ' 3' ' ' ' DC' . . . . . . . . . . . . . . . . . . . . 0 C5'--C4' 1.533 2.749 2 P-O3'-C3' 136.567 14.056 . . . . 1.1799999999999999 . . . . . . . . . . 1 1 . 1 . 001 nuclear orig full ' A' A ' 4' ' ' ' DA' . . . . . . . . . . . . . . . . . . . . 0 C5'--C4' 1.529 2.263 2 P-O3'-C3' 128.506 7.338 . . . . 0.65000000000000002 . . . . . . . . . . 1 1 . 1 . 001 nuclear orig full ' A' A ' 5' ' ' PBT . . . . . 0.501 H2'2 H2'1 ' A' ' 6' ' ' PBT . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 1 1 . 1 . 001 nuclear orig full ' A' A ' 6' ' ' PBT . . . . . 0.501 H2'1 H2'2 ' A' ' 5' ' ' PBT . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 1 1 . 1 . 001 nuclear orig full ' A' A ' 7' ' ' ' DA' . . . . . . . . . . . . . . . . . . . . 0 C5'--C4' 1.536 3.161 2 P-O5'-C5' 129.78 5.55 . . . . 0.5 . . . . . . . . . . 1 1 . 1 . 001 nuclear orig full ' A' A ' 8' ' ' ' DC' . . . . . . . . . . . . . . . . . . . . 0 C2'--C1' 1.567 3.276 3 P-O3'-C3' 125.812 5.094 . . . . 0.73999999999999999 . . . . . . . . . . 1 1 . 1 . 001 nuclear orig full ' A' A ' 9' ' ' ' DG' . . . . . . . . . . . . . . . . . . . . 0 O4'--C4' 1.469 2.135 2 P-O3'-C3' 129.284 7.987 . . . . 0.85999999999999999 . . . . . . . . . . 1 1 . 1 . 001 nuclear orig full ' A' A ' 10' ' ' ' DC' . . . . . . . . . . . . . . . . . . . . 0 O4'--C4' 1.463 1.564 2 P-O3'-C3' 131.613 9.927 . . . . 1.49 . . . . . . . . . . 1 1 . 1 . 001 nuclear orig full ' B' B ' 11' ' ' ' DG' . . . . . . . . . . . . . . . . . . . . 0 C5'--C4' 1.533 2.74 0 C5'-C4'-C3' 109.135 -3.71 . . . . 1.3100000000000001 . . . . . . . . . . 0 0 . 1 . 001 nuclear orig full ' B' B ' 12' ' ' ' DC' . . . . . . . . . . . . . . . . . . . . 0 C5'--C4' 1.534 2.898 1 P-O3'-C3' 125.104 4.503 . . . . 1.01 . . . . . . . . . . 1 1 . 1 . 001 nuclear orig full ' B' B ' 13' ' ' ' DG' . . . . . . . . . . . . . . . . . . . . 0 O4'--C4' 1.475 2.597 1 P-O3'-C3' 127.066 6.138 . . . . 0.89000000000000001 . . . . . . . . . . 1 1 . 1 . 001 nuclear orig full ' B' B ' 14' ' ' ' DT' . . . . . 0.474 ' C2 ' ' H72' ' B' ' 15' ' ' ' DT' . . . . . . . . 0 C3'--C2' 1.558 3.971 3 P-O3'-C3' 128.63 7.442 . . . . 1.1499999999999999 . . . . . . . . . . 2 2 . 1 . 001 nuclear orig full ' B' B ' 15' ' ' ' DT' . . . . . 0.474 ' H72' ' C2 ' ' B' ' 14' ' ' ' DT' . . . . . . . . 1 C5'--C4' 1.543 4.032 2 P-O3'-C3' 133.151 11.209 . . . . 1.1699999999999999 . . . . . . . . . . 3 2 . 1 . 001 nuclear orig full ' B' B ' 16' ' ' ' DA' . . . . . . . . . . . . . . . . . . . . 0 C5'--C4' 1.53 2.381 2 P-O3'-C3' 127.361 6.384 . . . . 0.94999999999999996 . . . . . . . . . . 1 1 . 1 . 001 nuclear orig full ' B' B ' 17' ' ' ' DT' . . . . . . . . . . . . . . . . . . . . 0 O4'--C4' 1.474 2.565 4 P-O3'-C3' 132.285 10.488 . . . . 1.27 . . . . . . . . . . 1 1 . 1 . 001 nuclear orig full ' B' B ' 18' ' ' ' DG' . . . . . . . . . . . . . . . . . . . . 0 C5'--C4' 1.527 2.035 2 P-O3'-C3' 125.513 4.844 . . . . 1.28 . . . . . . . . . . 1 1 . 1 . 001 nuclear orig full ' B' B ' 19' ' ' ' DC' . . . . . . . . . . . . . . . . . . . . 0 C5'--C4' 1.532 2.576 1 P-O3'-C3' 131.286 9.655 . . . . 0.77000000000000002 . . . . . . . . . . 1 1 . 1 . 001 nuclear orig full ' B' B ' 20' ' ' ' DG' . . . . . . . . . . . . . . . . . . . . 0 C3'--C2' 1.546 2.773 2 P-O5'-C5' 133.226 7.703 . . . . 1.71 . . . . . . . . . . 1 1 . 1 . 001 nuclear build full ' A' A ' 1' ' ' ' DC' . . . . . . . . . . . . . . . . . . . . 0 O4'--C4' 1.471 2.284 1 O4'-C1'-N19 112.643 6.054 . . . . 0.95 . . . . . . . . . . 1 1 . 1 . 001 nuclear build full ' A' A ' 2' ' ' ' DG' . . . . . . . . . . . . . . . . . . . . 0 C3'--C2' 1.537 1.885 1 P-O5'-C5' 129.108 5.13 . . . . 0.73 . . . . . . . . . . 1 1 . 1 . 001 nuclear build full ' A' A ' 3' ' ' ' DC' . . . . . . . . . . . . . . . . . . . . 0 C5'--C4' 1.533 2.749 2 P-O3'-C3' 136.567 14.056 . . . . 1.18 . . . . . . . . . . 1 1 . 1 . 001 nuclear build full ' A' A ' 4' ' ' ' DA' . . . . . . . . . . . . . . . . . . . . 0 C5'--C4' 1.529 2.263 2 P-O3'-C3' 128.506 7.338 . . . . 0.65 . . . . . . . . . . 1 1 . 1 . 001 nuclear build full ' A' A ' 5' ' ' PBT . . . . . 0.491 H2'1 H2'2 ' A' ' 6' ' ' PBT . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 1 1 . 1 . 001 nuclear build full ' A' A ' 6' ' ' PBT . . . . . 0.491 H2'2 H2'1 ' A' ' 5' ' ' PBT . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 1 1 . 1 . 001 nuclear build full ' A' A ' 7' ' ' ' DA' . . . . . . . . . . . . . . . . . . . . 0 C5'--C4' 1.536 3.161 2 P-O5'-C5' 129.78 5.55 . . . . 0.5 . . . . . . . . . . 1 1 . 1 . 001 nuclear build full ' A' A ' 8' ' ' ' DC' . . . . . . . . . . . . . . . . . . . . 0 C2'--C1' 1.567 3.276 3 P-O3'-C3' 125.812 5.094 . . . . 0.74 . . . . . . . . . . 1 1 . 1 . 001 nuclear build full ' A' A ' 9' ' ' ' DG' . . . . . . . . . . . . . . . . . . . . 0 O4'--C4' 1.469 2.135 2 P-O3'-C3' 129.284 7.987 . . . . 0.73 . . . . . . . . . . 1 1 . 1 . 001 nuclear build full ' A' A ' 10' ' ' ' DC' . . . . . . . . . . . . . . . . . . . . 0 O4'--C4' 1.463 1.564 2 P-O3'-C3' 131.613 9.927 . . . . 1.17 . . . . . . . . . . 1 1 . 1 . 001 nuclear build full ' B' B ' 11' ' ' ' DG' . . . . . . . . . . . . . . . . . . . . 0 C5'--C4' 1.533 2.74 0 C5'-C4'-C3' 109.135 -3.71 . . . . 1.31 . . . . . . . . . . 0 0 . 1 . 001 nuclear build full ' B' B ' 12' ' ' ' DC' . . . . . . . . . . . . . . . . . . . . 0 C5'--C4' 1.534 2.898 1 P-O3'-C3' 125.104 4.503 . . . . 1.01 . . . . . . . . . . 1 1 . 1 . 001 nuclear build full ' B' B ' 13' ' ' ' DG' . . . . . . . . . . . . . . . . . . . . 0 O4'--C4' 1.475 2.597 1 P-O3'-C3' 127.066 6.138 . . . . 0.89 . . . . . . . . . . 1 1 . 1 . 001 nuclear build full ' B' B ' 14' ' ' ' DT' . . . . . . . . . . . . . . . . . . . . 0 C3'--C2' 1.558 3.971 3 P-O3'-C3' 128.63 7.442 . . . . 1.06 . . . . . . . . . . 1 1 . 1 . 001 nuclear build full ' B' B ' 15' ' ' ' DT' . . . . . . . . . . . . . . . . . . . . 1 C5'--C4' 1.543 4.032 2 P-O3'-C3' 133.151 11.209 . . . . 1.1 . . . . . . . . . . 2 1 . 1 . 001 nuclear build full ' B' B ' 16' ' ' ' DA' . . . . . . . . . . . . . . . . . . . . 0 C5'--C4' 1.53 2.381 2 P-O3'-C3' 127.361 6.384 . . . . 0.92 . . . . . . . . . . 1 1 . 1 . 001 nuclear build full ' B' B ' 17' ' ' ' DT' . . . . . . . . . . . . . . . . . . . . 0 O4'--C4' 1.474 2.565 4 P-O3'-C3' 132.285 10.488 . . . . 1.14 . . . . . . . . . . 1 1 . 1 . 001 nuclear build full ' B' B ' 18' ' ' ' DG' . . . . . . . . . . . . . . . . . . . . 0 C5'--C4' 1.527 2.035 2 P-O3'-C3' 125.513 4.844 . . . . 1.28 . . . . . . . . . . 1 1 . 1 . 001 nuclear build full ' B' B ' 19' ' ' ' DC' . . . . . . . . . . . . . . . . . . . . 0 C5'--C4' 1.532 2.576 1 P-O3'-C3' 131.286 9.655 . . . . 0.74 . . . . . . . . . . 1 1 . 1 . 001 nuclear build full ' B' B ' 20' ' ' ' DG' . . . . . . . . . . . . . . . . . . . . 0 C3'--C2' 1.546 2.773 2 P-O5'-C5' 133.226 7.703 . . . . 1.71 . . . . . . . . . . 1 1 . 1 . 001 nuclear nobuild full ' A' A ' 1' ' ' ' DC' . . . . . . . . . . . . . . . . . . . . 0 O4'--C4' 1.471 2.284 1 O4'-C1'-N19 112.643 6.054 . . . . 0.95 . . . . . . . . . . 1 1 . 1 . 001 nuclear nobuild full ' A' A ' 2' ' ' ' DG' . . . . . . . . . . . . . . . . . . . . 0 C3'--C2' 1.537 1.885 1 P-O5'-C5' 129.108 5.13 . . . . 0.73 . . . . . . . . . . 1 1 . 1 . 001 nuclear nobuild full ' A' A ' 3' ' ' ' DC' . . . . . . . . . . . . . . . . . . . . 0 C5'--C4' 1.533 2.749 2 P-O3'-C3' 136.567 14.056 . . . . 1.18 . . . . . . . . . . 1 1 . 1 . 001 nuclear nobuild full ' A' A ' 4' ' ' ' DA' . . . . . . . . . . . . . . . . . . . . 0 C5'--C4' 1.529 2.263 2 P-O3'-C3' 128.506 7.338 . . . . 0.65 . . . . . . . . . . 1 1 . 1 . 001 nuclear nobuild full ' A' A ' 5' ' ' PBT . . . . . 0.491 H2'1 H2'2 ' A' ' 6' ' ' PBT . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 1 1 . 1 . 001 nuclear nobuild full ' A' A ' 6' ' ' PBT . . . . . 0.491 H2'2 H2'1 ' A' ' 5' ' ' PBT . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 1 1 . 1 . 001 nuclear nobuild full ' A' A ' 7' ' ' ' DA' . . . . . . . . . . . . . . . . . . . . 0 C5'--C4' 1.536 3.161 2 P-O5'-C5' 129.78 5.55 . . . . 0.5 . . . . . . . . . . 1 1 . 1 . 001 nuclear nobuild full ' A' A ' 8' ' ' ' DC' . . . . . . . . . . . . . . . . . . . . 0 C2'--C1' 1.567 3.276 3 P-O3'-C3' 125.812 5.094 . . . . 0.74 . . . . . . . . . . 1 1 . 1 . 001 nuclear nobuild full ' A' A ' 9' ' ' ' DG' . . . . . . . . . . . . . . . . . . . . 0 O4'--C4' 1.469 2.135 2 P-O3'-C3' 129.284 7.987 . . . . 0.73 . . . . . . . . . . 1 1 . 1 . 001 nuclear nobuild full ' A' A ' 10' ' ' ' DC' . . . . . . . . . . . . . . . . . . . . 0 O4'--C4' 1.463 1.564 2 P-O3'-C3' 131.613 9.927 . . . . 1.17 . . . . . . . . . . 1 1 . 1 . 001 nuclear nobuild full ' B' B ' 11' ' ' ' DG' . . . . . . . . . . . . . . . . . . . . 0 C5'--C4' 1.533 2.74 0 C5'-C4'-C3' 109.135 -3.71 . . . . 1.31 . . . . . . . . . . 0 0 . 1 . 001 nuclear nobuild full ' B' B ' 12' ' ' ' DC' . . . . . . . . . . . . . . . . . . . . 0 C5'--C4' 1.534 2.898 1 P-O3'-C3' 125.104 4.503 . . . . 1.01 . . . . . . . . . . 1 1 . 1 . 001 nuclear nobuild full ' B' B ' 13' ' ' ' DG' . . . . . . . . . . . . . . . . . . . . 0 O4'--C4' 1.475 2.597 1 P-O3'-C3' 127.066 6.138 . . . . 0.89 . . . . . . . . . . 1 1 . 1 . 001 nuclear nobuild full ' B' B ' 14' ' ' ' DT' . . . . . . . . . . . . . . . . . . . . 0 C3'--C2' 1.558 3.971 3 P-O3'-C3' 128.63 7.442 . . . . 1.06 . . . . . . . . . . 1 1 . 1 . 001 nuclear nobuild full ' B' B ' 15' ' ' ' DT' . . . . . . . . . . . . . . . . . . . . 1 C5'--C4' 1.543 4.032 2 P-O3'-C3' 133.151 11.209 . . . . 1.1 . . . . . . . . . . 2 1 . 1 . 001 nuclear nobuild full ' B' B ' 16' ' ' ' DA' . . . . . . . . . . . . . . . . . . . . 0 C5'--C4' 1.53 2.381 2 P-O3'-C3' 127.361 6.384 . . . . 0.92 . . . . . . . . . . 1 1 . 1 . 001 nuclear nobuild full ' B' B ' 17' ' ' ' DT' . . . . . . . . . . . . . . . . . . . . 0 O4'--C4' 1.474 2.565 4 P-O3'-C3' 132.285 10.488 . . . . 1.14 . . . . . . . . . . 1 1 . 1 . 001 nuclear nobuild full ' B' B ' 18' ' ' ' DG' . . . . . . . . . . . . . . . . . . . . 0 C5'--C4' 1.527 2.035 2 P-O3'-C3' 125.513 4.844 . . . . 1.28 . . . . . . . . . . 1 1 . 1 . 001 nuclear nobuild full ' B' B ' 19' ' ' ' DC' . . . . . . . . . . . . . . . . . . . . 0 C5'--C4' 1.532 2.576 1 P-O3'-C3' 131.286 9.655 . . . . 0.74 . . . . . . . . . . 1 1 . 1 . 001 nuclear nobuild full ' B' B ' 20' ' ' ' DG' . . . . . . . . . . . . . . . . . . . . 0 C3'--C2' 1.546 2.773 2 P-O5'-C5' 133.226 7.703 . . . . 1.71 . . . . . . . . . . 1 1 . 1 stop_ save_