data_1m6a_residue save_MolProbity _Software.Sf_category software _Software.Sf_framecode MolProbity _Software.Entry_ID ? _Software.ID 1 _Software.Name MolProbity _Software.Version 4.0 _Software.Details . save_ save_CYRANGE _Software.Sf_category software _Software.Sf_framecode CYRANGE _Software.Entry_ID ? _Software.ID 2 _Software.Name CYRANGE _Software.Version 2.0 _Software.Details . save_ save_Structure_validation_residue _Structure_validation_residue.Sf_category structure_validation _Structure_validation_residue.Sf_framecode Structure_validation_residue _Structure_validation_residue.Entry_ID ? _Structure_validation_residue.List_ID 1 _Structure_validation_residue.PDB_accession_code 1m6a _Structure_validation_residue.Date_analyzed 2016-10-06 loop_ _Residue_analysis_software.Software_ID _Residue_analysis_software.Software_label _Residue_analysis_software.Method_ID _Residue_analysis_software.Method_label _Residue_analysis_software.Entry_ID _Residue_analysis_software.Structure_validation_oneline_list_ID 1 MolProbity . . ? 1 2 CYRANGE . . ? 1 stop_ loop_ _Residue_analysis.ID _Residue_analysis.PDB_model_num _Residue_analysis.Hydrogen_positions _Residue_analysis.MolProbity_flips _Residue_analysis.Cyrange_core_flag _Residue_analysis.Two_letter_chain_ID _Residue_analysis.PDB_strand_ID _Residue_analysis.PDB_residue_no _Residue_analysis.PDB_ins_code _Residue_analysis.PDB_residue_name _Residue_analysis.Assembly_ID _Residue_analysis.Entity_assembly_ID _Residue_analysis.Entity_ID _Residue_analysis.Comp_ID _Residue_analysis.Comp_index_ID _Residue_analysis.Clash_value _Residue_analysis.Clash_source_PDB_atom_name _Residue_analysis.Clash_destination_PDB_atom_name _Residue_analysis.Clash_destination_PDB_strand_ID _Residue_analysis.Clash_destination_PDB_residue_no _Residue_analysis.Clash_destination_PDB_ins_code _Residue_analysis.Clash_destination_PDB_residue_name _Residue_analysis.Cbeta_deviation_value _Residue_analysis.Rotamer_score _Residue_analysis.Rotamer_name _Residue_analysis.Ramachandran_phi _Residue_analysis.Ramachandran_psi _Residue_analysis.Ramachandran_score _Residue_analysis.Ramachandran_evaluation _Residue_analysis.Ramachandran_type _Residue_analysis.Bond_outlier_count _Residue_analysis.Worst_bond _Residue_analysis.Worst_bond_value _Residue_analysis.Worst_bond_sigma _Residue_analysis.Angle_outlier_count _Residue_analysis.Worst_angle _Residue_analysis.Worst_angle_value _Residue_analysis.Worst_angle_sigma _Residue_analysis.RNA_phosphate_perpendicular_outlier _Residue_analysis.RNA_suitness_score _Residue_analysis.RNA_suite_conformer _Residue_analysis.RNA_suite_triage _Residue_analysis.Max_b_factor _Residue_analysis.Tau_angle _Residue_analysis.Omega_dihedral _Residue_analysis.Disulfide_chi1 _Residue_analysis.Disulfide_chi2 _Residue_analysis.Disulfide_chi3 _Residue_analysis.Disulfide_ss_angle _Residue_analysis.Disulfide_ss _Residue_analysis.Disulfide_ss_angle_prime _Residue_analysis.Disulfide_chi2prime _Residue_analysis.Disulfide_chi1prime _Residue_analysis.Outlier_count_separate_geometry _Residue_analysis.Outlier_count _Residue_analysis.Entry_ID _Residue_analysis.Structure_validation_residue_list_ID . 001 nuclear orig full ' A' A ' 1' ' ' ' DC' . . . . . 0.769 " H1'" " O4'" ' D' ' 2' ' ' ' DC' . . . . . . . . 0 O4'--C1' 1.445 1.901 0 O4'-C1'-N19 110.532 3.415 . . . . 0.0 . . . . . . . . . . 1 1 . 1 . 001 nuclear orig full ' A' A ' 2' ' ' ' DC' . . . . . 0.768 " O4'" " H1'" ' D' ' 1' ' ' ' DC' . . . . . . . . 0 C5'--C4' 1.528 2.124 0 C4'-C3'-C2' 106.315 3.115 . . . . 0.0 . . . . . . . . . . 1 1 . 1 . 001 nuclear orig full ' B' B ' 1' ' ' ' DC' . . . . . 0.756 " H1'" " O4'" ' C' ' 2' ' ' ' DC' . . . . . . . . 0 O4'--C1' 1.445 1.942 0 O4'-C1'-N19 110.464 3.33 . . . . 0.0 . . . . . . . . . . 1 1 . 1 . 001 nuclear orig full ' B' B ' 2' ' ' ' DC' . . . . . 0.754 " O4'" " H1'" ' C' ' 1' ' ' ' DC' . . . . . . . . 0 C5'--C4' 1.527 1.982 0 C4'-C3'-C2' 106.313 3.113 . . . . 0.0 . . . . . . . . . . 1 1 . 1 . 001 nuclear orig full ' C' C ' 1' ' ' ' DC' . . . . . 0.754 " H1'" " O4'" ' B' ' 2' ' ' ' DC' . . . . . . . . 0 O4'--C1' 1.445 1.92 0 O4'-C1'-N19 110.466 3.333 . . . . 0.0 . . . . . . . . . . 1 1 . 1 . 001 nuclear orig full ' C' C ' 2' ' ' ' DC' . . . . . 0.756 " O4'" " H1'" ' B' ' 1' ' ' ' DC' . . . . . . . . 0 C5'--C4' 1.528 2.068 0 C4'-C3'-C2' 106.269 3.069 . . . . 0.0 . . . . . . . . . . 1 1 . 1 . 001 nuclear orig full ' D' D ' 1' ' ' ' DC' . . . . . 0.768 " H1'" " O4'" ' A' ' 2' ' ' ' DC' . . . . . . . . 0 C5'--C4' 1.527 1.947 0 O4'-C1'-N19 110.54 3.425 . . . . 0.0 . . . . . . . . . . 1 1 . 1 . 001 nuclear orig full ' D' D ' 2' ' ' ' DC' . . . . . 0.769 " O4'" " H1'" ' A' ' 1' ' ' ' DC' . . . . . . . . 2 P--OP2 1.404 -4.775 1 OP1-P-OP2 113.525 -4.05 . . . . 0.0 . . . . . . . . . . 3 2 . 1 . 001 nuclear build full ' A' A ' 1' ' ' ' DC' . . . . . 0.751 " H1'" " O4'" ' D' ' 2' ' ' ' DC' . . . . . . . . 0 O4'--C1' 1.445 1.901 0 O4'-C1'-N19 110.532 3.415 . . . . 0.0 . . . . . . . . . . 1 1 . 1 . 001 nuclear build full ' A' A ' 2' ' ' ' DC' . . . . . 0.751 " O4'" " H1'" ' D' ' 1' ' ' ' DC' . . . . . . . . 0 C5'--C4' 1.528 2.124 0 C4'-C3'-C2' 106.315 3.115 . . . . 0.0 . . . . . . . . . . 1 1 . 1 . 001 nuclear build full ' B' B ' 1' ' ' ' DC' . . . . . 0.734 " H1'" " O4'" ' C' ' 2' ' ' ' DC' . . . . . . . . 0 O4'--C1' 1.445 1.942 0 O4'-C1'-N19 110.464 3.33 . . . . 0.0 . . . . . . . . . . 1 1 . 1 . 001 nuclear build full ' B' B ' 2' ' ' ' DC' . . . . . 0.731 " O4'" " H1'" ' C' ' 1' ' ' ' DC' . . . . . . . . 0 C5'--C4' 1.527 1.982 0 C4'-C3'-C2' 106.313 3.113 . . . . 0.0 . . . . . . . . . . 1 1 . 1 . 001 nuclear build full ' C' C ' 1' ' ' ' DC' . . . . . 0.731 " H1'" " O4'" ' B' ' 2' ' ' ' DC' . . . . . . . . 0 O4'--C1' 1.445 1.92 0 O4'-C1'-N19 110.466 3.333 . . . . 0.0 . . . . . . . . . . 1 1 . 1 . 001 nuclear build full ' C' C ' 2' ' ' ' DC' . . . . . 0.734 " O4'" " H1'" ' B' ' 1' ' ' ' DC' . . . . . . . . 0 C5'--C4' 1.528 2.068 0 C4'-C3'-C2' 106.269 3.069 . . . . 0.0 . . . . . . . . . . 1 1 . 1 . 001 nuclear build full ' D' D ' 1' ' ' ' DC' . . . . . 0.751 " H1'" " O4'" ' A' ' 2' ' ' ' DC' . . . . . . . . 0 C5'--C4' 1.527 1.947 0 O4'-C1'-N19 110.54 3.425 . . . . 0.0 . . . . . . . . . . 1 1 . 1 . 001 nuclear build full ' D' D ' 2' ' ' ' DC' . . . . . 0.751 " O4'" " H1'" ' A' ' 1' ' ' ' DC' . . . . . . . . 2 P--OP2 1.404 -4.775 1 OP1-P-OP2 113.525 -4.05 . . . . 0.0 . . . . . . . . . . 3 2 . 1 . 001 nuclear nobuild full ' A' A ' 1' ' ' ' DC' . . . . . 0.751 " H1'" " O4'" ' D' ' 2' ' ' ' DC' . . . . . . . . 0 O4'--C1' 1.445 1.901 0 O4'-C1'-N19 110.532 3.415 . . . . 0.0 . . . . . . . . . . 1 1 . 1 . 001 nuclear nobuild full ' A' A ' 2' ' ' ' DC' . . . . . 0.751 " O4'" " H1'" ' D' ' 1' ' ' ' DC' . . . . . . . . 0 C5'--C4' 1.528 2.124 0 C4'-C3'-C2' 106.315 3.115 . . . . 0.0 . . . . . . . . . . 1 1 . 1 . 001 nuclear nobuild full ' B' B ' 1' ' ' ' DC' . . . . . 0.734 " H1'" " O4'" ' C' ' 2' ' ' ' DC' . . . . . . . . 0 O4'--C1' 1.445 1.942 0 O4'-C1'-N19 110.464 3.33 . . . . 0.0 . . . . . . . . . . 1 1 . 1 . 001 nuclear nobuild full ' B' B ' 2' ' ' ' DC' . . . . . 0.731 " O4'" " H1'" ' C' ' 1' ' ' ' DC' . . . . . . . . 0 C5'--C4' 1.527 1.982 0 C4'-C3'-C2' 106.313 3.113 . . . . 0.0 . . . . . . . . . . 1 1 . 1 . 001 nuclear nobuild full ' C' C ' 1' ' ' ' DC' . . . . . 0.731 " H1'" " O4'" ' B' ' 2' ' ' ' DC' . . . . . . . . 0 O4'--C1' 1.445 1.92 0 O4'-C1'-N19 110.466 3.333 . . . . 0.0 . . . . . . . . . . 1 1 . 1 . 001 nuclear nobuild full ' C' C ' 2' ' ' ' DC' . . . . . 0.734 " O4'" " H1'" ' B' ' 1' ' ' ' DC' . . . . . . . . 0 C5'--C4' 1.528 2.068 0 C4'-C3'-C2' 106.269 3.069 . . . . 0.0 . . . . . . . . . . 1 1 . 1 . 001 nuclear nobuild full ' D' D ' 1' ' ' ' DC' . . . . . 0.751 " H1'" " O4'" ' A' ' 2' ' ' ' DC' . . . . . . . . 0 C5'--C4' 1.527 1.947 0 O4'-C1'-N19 110.54 3.425 . . . . 0.0 . . . . . . . . . . 1 1 . 1 . 001 nuclear nobuild full ' D' D ' 2' ' ' ' DC' . . . . . 0.751 " O4'" " H1'" ' A' ' 1' ' ' ' DC' . . . . . . . . 2 P--OP2 1.404 -4.775 1 OP1-P-OP2 113.525 -4.05 . . . . 0.0 . . . . . . . . . . 3 2 . 1 stop_ save_