data_bmse001100 ####################### # Entry information # ####################### save_entry_information _Entry.Sf_category entry_information _Entry.Sf_framecode entry_information _Entry.ID bmse001100 _Entry.Title ; 2-methyl-3,4,5,6-tetrahydropyrimidine-4-carboxylic acid ; _Entry.Type 'metabolite/natural product' _Entry.Version_type original _Entry.Submission_date 2016-02-16 _Entry.Accession_date 2016-02-17 _Entry.Last_release_date 2016-02-17 _Entry.Original_release_date 2016-02-17 _Entry.Origination author _Entry.NMR_STAR_version 3.1.1.92 _Entry.Original_NMR_STAR_version 3.1.1.92 _Entry.Experimental_method NMR _Entry.Experimental_method_subtype solution _Entry.DOI 10.13018/BMSE001100 loop_ _Entry_author.Ordinal _Entry_author.Given_name _Entry_author.Family_name _Entry_author.First_initial _Entry_author.Middle_initials _Entry_author.Family_title _Entry_author.Entry_ID 1 Maria Nesterova M. . . bmse001100 2 Lawrence Clos L. J. II bmse001100 3 Christopher Stancic C. . . bmse001100 4 Mark Anderson M. E. . bmse001100 5 John Markley J. L. . bmse001100 stop_ loop_ _Entry_src.ID _Entry_src.Project_name _Entry_src.Organization_full_name _Entry_src.Organization_initials _Entry_src.Entry_ID 1 metabolomics 'National Magnetic Resonance Facility at Madison' NMRFAM bmse001100 stop_ loop_ _Data_set.Type _Data_set.Count _Data_set.Entry_ID assigned_chemical_shifts 1 bmse001100 spectral_peak_list 5 bmse001100 stop_ loop_ _Datum.Type _Datum.Count _Datum.Entry_ID '13C chemical shifts' 6 bmse001100 '1H chemical shifts' 8 bmse001100 stop_ loop_ _Release.Release_number _Release.Format_type _Release.Format_version _Release.Date _Release.Submission_date _Release.Type _Release.Author _Release.Detail _Release.Entry_ID 1 . . 2016-02-17 . original BMRB . bmse001100 2 . . 2017-10-12 2017-10-12 update BMRB 'Remediated Experiment_file loop if present and standardized mol and png file tags.' bmse001100 3 . . 2017-12-19 2017-10-12 update BMRB 'InChI numbering updated according to ALATIS' bmse001100 stop_ save_ ############### # Citations # ############### save_citation_pubchem _Citation.Sf_category citations _Citation.Sf_framecode citation_pubchem _Citation.Entry_ID bmse001100 _Citation.ID 1 _Citation.Class 'reference citation' _Citation.DOI 10.1093/nar/gkl1031 _Citation.PubMed_ID 17170002 _Citation.Title ; Database resources of the National Center for Biotechnology Information ; _Citation.Status published _Citation.Type journal _Citation.Journal_abbrev 'Nucleic Acids Res.' _Citation.Journal_name_full 'Nucleic Acids Research' _Citation.Journal_volume 35 _Citation.Journal_issue 'Database issue' _Citation.Journal_ISSN 0305-1048 _Citation.Page_first D1 _Citation.Page_last D2 _Citation.Year 2007 loop_ _Citation_author.Ordinal _Citation_author.Given_name _Citation_author.Family_name _Citation_author.First_initial _Citation_author.Middle_initials _Citation_author.Entry_ID _Citation_author.Citation_ID 1 David Wheeler D. L. bmse001100 1 2 Tanya Barrett T. . bmse001100 1 3 Dennis Benson D. A. bmse001100 1 4 Stephen Bryant S. H. bmse001100 1 5 Kathi Canese K. . bmse001100 1 6 Vyacheslav Chetvenin V. . bmse001100 1 7 Deanna Church D. M. bmse001100 1 8 Michael DiCuccio M. . bmse001100 1 9 Ron Edgar R. . bmse001100 1 10 Scott Federhen S. . bmse001100 1 11 Lewis Geer L. Y. bmse001100 1 13 Yuri Kapustin Y. . bmse001100 1 14 Oleg Khovayko O. . bmse001100 1 15 David Landsman D. . bmse001100 1 16 David Lipman D. J. bmse001100 1 17 Thomas Madden T. L. bmse001100 1 18 Donna Maglott D. R. bmse001100 1 19 James Ostell J. . bmse001100 1 20 Vadim Miller V. . bmse001100 1 21 Kim Pruitt K. D. bmse001100 1 22 Gregory Schuler G. D. bmse001100 1 23 Edwin Sequeira E. . bmse001100 1 24 Steven Sherry S. T. bmse001100 1 25 Karl Sirotkin K. . bmse001100 1 26 Alexandre Souvorov A. . bmse001100 1 27 Grigory Starchenko G. . bmse001100 1 28 Roman Tatusov R. L. bmse001100 1 29 Tatiana Tatusova T. A. bmse001100 1 30 Lukas Wagner L. . bmse001100 1 31 Eugene Yaschenko E. . bmse001100 1 stop_ save_ save_citation_nmrbot _Citation.Sf_category citations _Citation.Sf_framecode citation_nmrbot _Citation.Entry_ID bmse001100 _Citation.ID 2 _Citation.Class 'reference citation' _Citation.DOI 10.1007/s11306-012-0490-9 _Citation.PubMed_ID PMC3651530 _Citation.Title ; NMRbot: Python scripts enable high-throughput data collection on current Bruker BioSpin NMR spectrometers ; _Citation.Status published _Citation.Type journal _Citation.Journal_abbrev Metabolomics _Citation.Journal_name_full Metabolomics _Citation.Journal_volume 9 _Citation.Journal_issue 3 _Citation.Journal_ISSN 1573-3882 _Citation.Page_first 558 _Citation.Page_last 563 _Citation.Year 2013 loop_ _Citation_author.Ordinal _Citation_author.Given_name _Citation_author.Family_name _Citation_author.First_initial _Citation_author.Middle_initials _Citation_author.Family_title _Citation_author.Entry_ID _Citation_author.Citation_ID 1 Lawrence Clos L. J. II bmse001100 2 2 M Jofre M. F. . bmse001100 2 3 James Ellinger J. J. . bmse001100 2 4 William Westler W. M. . bmse001100 2 5 John Markley J. L. . bmse001100 2 stop_ save_ ############################################# # Molecular system (assembly) description # ############################################# save_assembly_1 _Assembly.Sf_category assembly _Assembly.Sf_framecode assembly_1 _Assembly.Entry_ID bmse001100 _Assembly.ID 1 _Assembly.Name '2-methyl-3,4,5,6-tetrahydropyrimidine-4-carboxylic acid' _Assembly.Number_of_components 1 _Assembly.Paramagnetic no _Assembly.Thiol_state 'not present' loop_ _Entity_assembly.ID _Entity_assembly.Entity_assembly_name _Entity_assembly.Entity_ID _Entity_assembly.Entity_label _Entity_assembly.Experimental_data_reported _Entity_assembly.Physical_state _Entity_assembly.Conformational_isomer _Entity_assembly.Chemical_exchange_state _Entity_assembly.Entry_ID _Entity_assembly.Assembly_ID 1 '2-methyl-3,4,5,6-tetrahydropyrimidine-4-carboxylic acid' 1 $entity_1 yes native no no bmse001100 1 stop_ loop_ _Atom.Assembly_atom_ID _Atom.Entity_assembly_ID _Atom.Entity_ID _Atom.Comp_index_ID _Atom.Seq_ID _Atom.Comp_ID _Atom.Atom_ID _Atom.Type_symbol _Atom.Entry_ID _Atom.Assembly_ID 1 1 1 1 1 BMET001100 O9 O bmse001100 1 2 1 1 1 1 BMET001100 O10 O bmse001100 1 3 1 1 1 1 BMET001100 N8 N bmse001100 1 4 1 1 1 1 BMET001100 N7 N bmse001100 1 5 1 1 1 1 BMET001100 C5 C bmse001100 1 6 1 1 1 1 BMET001100 C2 C bmse001100 1 7 1 1 1 1 BMET001100 C3 C bmse001100 1 8 1 1 1 1 BMET001100 C4 C bmse001100 1 9 1 1 1 1 BMET001100 C6 C bmse001100 1 10 1 1 1 1 BMET001100 C1 C bmse001100 1 11 1 1 1 1 BMET001100 H20 H bmse001100 1 12 1 1 1 1 BMET001100 H19 H bmse001100 1 13 1 1 1 1 BMET001100 H18 H bmse001100 1 14 1 1 1 1 BMET001100 H14 H bmse001100 1 15 1 1 1 1 BMET001100 H15 H bmse001100 1 16 1 1 1 1 BMET001100 H16 H bmse001100 1 17 1 1 1 1 BMET001100 H17 H bmse001100 1 18 1 1 1 1 BMET001100 H13 H bmse001100 1 19 1 1 1 1 BMET001100 H12 H bmse001100 1 20 1 1 1 1 BMET001100 H11 H bmse001100 1 stop_ save_ #################################### # Biological polymers and ligands # #################################### save_entity_1 _Entity.Sf_category entity _Entity.Sf_framecode entity_1 _Entity.Entry_ID bmse001100 _Entity.ID 1 _Entity.Name '2-methyl-3,4,5,6-tetrahydropyrimidine-4-carboxylic acid' _Entity.Type non-polymer _Entity.Ambiguous_conformational_states no _Entity.Ambiguous_chem_comp_sites no _Entity.Nstd_monomer no _Entity.Nstd_chirality no _Entity.Nstd_linkage no _Entity.Nonpolymer_comp_ID BMET001100 _Entity.Paramagnetic no _Entity.Thiol_state 'not present' _Entity.Formula_weight 142.1558 loop_ _Entity_comp_index.ID _Entity_comp_index.Auth_seq_ID _Entity_comp_index.Comp_ID _Entity_comp_index.Comp_label _Entity_comp_index.Entry_ID _Entity_comp_index.Entity_ID 1 1 BMET001100 $chem_comp_1 bmse001100 1 stop_ save_ #################### # Natural source # #################### save_natural_source _Entity_natural_src_list.Sf_category natural_source _Entity_natural_src_list.Sf_framecode natural_source _Entity_natural_src_list.Entry_ID bmse001100 _Entity_natural_src_list.ID 1 loop_ _Entity_natural_src.ID _Entity_natural_src.Entity_ID _Entity_natural_src.Entity_label _Entity_natural_src.NCBI_taxonomy_ID _Entity_natural_src.Type _Entity_natural_src.Common _Entity_natural_src.Organism_name_scientific _Entity_natural_src.Organism_name_common _Entity_natural_src.Superkingdom _Entity_natural_src.Genus _Entity_natural_src.Species _Entity_natural_src.Entry_ID _Entity_natural_src.Entity_natural_src_list_ID 1 1 $entity_1 na 'multiple natural sources' yes na na na na na bmse001100 1 stop_ save_ ######################### # Experimental source # ######################### save_experimental_source _Entity_experimental_src_list.Sf_category experimental_source _Entity_experimental_src_list.Sf_framecode experimental_source _Entity_experimental_src_list.Entry_ID bmse001100 _Entity_experimental_src_list.ID 1 loop_ _Entity_experimental_src.ID _Entity_experimental_src.Entity_ID _Entity_experimental_src.Entity_label _Entity_experimental_src.Production_method _Entity_experimental_src.Entry_ID _Entity_experimental_src.Entity_experimental_src_list_ID 1 1 $entity_1 'chemical synthesis' bmse001100 1 stop_ save_ ################################# # Polymer residues and ligands # ################################# save_chem_comp_1 _Chem_comp.Sf_category chem_comp _Chem_comp.Sf_framecode chem_comp_1 _Chem_comp.Entry_ID bmse001100 _Chem_comp.ID BMET001100 _Chem_comp.Provenance BMRB _Chem_comp.Name '2-methyl-3,4,5,6-tetrahydropyrimidine-4-carboxylic acid' _Chem_comp.Type non-polymer _Chem_comp.BMRB_code BMET001100 _Chem_comp.Initial_date 2016-02-16 _Chem_comp.Number_atoms_all 20 _Chem_comp.Number_atoms_nh 10 _Chem_comp.InChI_code InChI=1S/C6H10N2O2/c1-4-7-3-2-5(8-4)6(9)10/h5H,2-3H2,1H3,(H,7,8)(H,9,10)/t5-/m0/s1 _Chem_comp.Formal_charge 0 _Chem_comp.Paramagnetic no _Chem_comp.Aromatic no _Chem_comp.Formula C6H10N2O2 _Chem_comp.Formula_weight 142.1558 _Chem_comp.Formula_mono_iso_wt_nat 142.07422757 _Chem_comp.Formula_mono_iso_wt_13C 148.094356598 _Chem_comp.Formula_mono_iso_wt_15N 144.068297356 _Chem_comp.Formula_mono_iso_wt_13C_15N 150.088426384 _Chem_comp.Image_file_name bmse001100.png _Chem_comp.Image_file_format png _Chem_comp.Struct_file_name bmse001100.mol _Chem_comp.Struct_file_format mol loop_ _Chem_comp_common_name.Name _Chem_comp_common_name.Type _Chem_comp_common_name.Entry_ID _Chem_comp_common_name.Comp_ID Ectoine name bmse001100 BMET001100 stop_ loop_ _Chem_comp_descriptor.Descriptor _Chem_comp_descriptor.Type _Chem_comp_descriptor.Program _Chem_comp_descriptor.Program_version _Chem_comp_descriptor.Entry_ID _Chem_comp_descriptor.Comp_ID CC1=NCCC(C(=O)O)N1 SMILES_CANONICAL RDKit 2015.09.2 bmse001100 BMET001100 CC1=NCCC(N1)C(=O)O SMILES_CANONICAL PUBCHEM_OPENEYE na bmse001100 BMET001100 CC1=NCC[C@@H](C(=O)O)N1 SMILES_ISOMERIC RDKit 2015.09.2 bmse001100 BMET001100 CC1=NCC[C@H](N1)C(=O)O SMILES_ISOMERIC PUBCHEM_OPENEYE na bmse001100 BMET001100 InChI=1S/C6H10N2O2/c1-4-7-3-2-5(8-4)6(9)10/h5H,2-3H2,1H3,(H,7,8)(H,9,10)/t5-/m0/s1 INCHI OpenBabel 2.3.2 bmse001100 BMET001100 InChI=1S/C6H10N2O2/c1-4-7-3-2-5(8-4)6(9)10/h5H,2-3H2,1H3,(H,7,8)(H,9,10)/t5-/m0/s1 INCHI PUBCHEM_IUPAC na bmse001100 BMET001100 InChI=1S/C6H10N2O2/c1-4-7-3-2-5(8-4)6(9)10/h5H,2-3H2,1H3,(H,7,8)(H,9,10)/t5-/m0/s1 INCHI RDKit 2015.09.2 bmse001100 BMET001100 OC(=O)C1NC(C)=NCC1 SMILES RDKit 2015.09.2 bmse001100 BMET001100 OC(=O)[C@@H]1CCN=C(N1)C SMILES OpenBabel 2.3.2 bmse001100 BMET001100 OC(=O)[C@@H]1CCN=C(N1)C SMILES_CANONICAL OpenBabel 2.3.2 bmse001100 BMET001100 WQXNXVUDBPYKBA-YFKPBYRVSA-N INCHI_KEY OpenBabel 2.3.2 bmse001100 BMET001100 WQXNXVUDBPYKBA-YFKPBYRVSA-N INCHI_KEY PUBCHEM_IUPAC na bmse001100 BMET001100 WQXNXVUDBPYKBA-YFKPBYRVSA-N INCHI_KEY RDKit 2015.09.2 bmse001100 BMET001100 InChI=1S/C6H10N2O2/c1-4-7-3-2-5(8-4)6(9)10/h5H,2-3H2,1H3,(H,7,8)(H,9,10)/t5-/m0/s1 INCHI ALATIS 1.0 bmse001100 BMET001100 stop_ loop_ _Chem_comp_identifier.Identifier _Chem_comp_identifier.Type _Chem_comp_identifier.Program _Chem_comp_identifier.Program_version _Chem_comp_identifier.Entry_ID _Chem_comp_identifier.Comp_ID '(4S)-2-METHYL-1,4,5,6-TETRAHYDROPYRIMIDINE-4-CARBOXYLIC ACID' 'SYSTEMATIC NAME' na na bmse001100 BMET001100 '(4S)-2-methyl-3,4,5,6-tetrahydropyrimidine-4-carboxylic acid' 'SYSTEMATIC NAME' cactus.nci.nih.gov na bmse001100 BMET001100 '(6S)-2-methyl-1,4,5,6-tetrahydropyrimidine-6-carboxylic acid' PUBCHEM_IUPAC_CAS_NAME na na bmse001100 BMET001100 '(6S)-2-methyl-1,4,5,6-tetrahydropyrimidine-6-carboxylic acid' PUBCHEM_IUPAC_NAME na na bmse001100 BMET001100 '(6S)-2-methyl-1,4,5,6-tetrahydropyrimidine-6-carboxylic acid' PUBCHEM_IUPAC_OPENEYE_NAME na na bmse001100 BMET001100 '(6S)-2-methyl-1,4,5,6-tetrahydropyrimidine-6-carboxylic acid' PUBCHEM_IUPAC_SYSTEMATIC_NAME na na bmse001100 BMET001100 '(6S)-2-methyl-1,4,5,6-tetrahydropyrimidine-6-carboxylic acid' PUBCHEM_IUPAC_TRADITIONAL_NAME na na bmse001100 BMET001100 '2-methyl-3,4,5,6-tetrahydropyrimidine-4-carboxylic acid' 'SYSTEMATIC NAME' cactus.nci.nih.gov na bmse001100 BMET001100 stop_ loop_ _Chem_comp_atom.Atom_ID _Chem_comp_atom.Type_symbol _Chem_comp_atom.Stereo_config _Chem_comp_atom.Charge _Chem_comp_atom.Aromatic_flag _Chem_comp_atom.Drawing_2D_coord_x _Chem_comp_atom.Drawing_2D_coord_y _Chem_comp_atom.PDBX_ordinal _Chem_comp_atom.Entry_ID _Chem_comp_atom.Comp_ID O9 O N 0 no 2.5369 0.0 1 bmse001100 BMET001100 O10 O N 0 no 3.403 -1.5 2 bmse001100 BMET001100 N8 N N 0 no 5.135 -0.5 3 bmse001100 BMET001100 N7 N N 0 no 6.001 1.0 4 bmse001100 BMET001100 C5 C S 0 no 4.269 0.0 5 bmse001100 BMET001100 C2 C N 0 no 4.269 1.0 6 bmse001100 BMET001100 C3 C N 0 no 5.135 1.5 7 bmse001100 BMET001100 C4 C N 0 no 6.001 0.0 8 bmse001100 BMET001100 C6 C N 0 no 3.403 -0.5 9 bmse001100 BMET001100 C1 C N 0 no 6.8671 -0.5 10 bmse001100 BMET001100 H20 H N 0 no 4.269 -0.62 11 bmse001100 BMET001100 H19 H N 0 no 4.0569 1.5826 12 bmse001100 BMET001100 H18 H N 0 no 3.6584 0.8923 13 bmse001100 BMET001100 H14 H N 0 no 5.5335 1.975 14 bmse001100 BMET001100 H15 H N 0 no 4.7365 1.975 15 bmse001100 BMET001100 H16 H N 0 no 5.135 -1.12 16 bmse001100 BMET001100 H17 H N 0 no 6.5571 -1.0369 17 bmse001100 BMET001100 H13 H N 0 no 7.404 -0.81 18 bmse001100 BMET001100 H12 H N 0 no 7.1771 0.0369 19 bmse001100 BMET001100 H11 H N 0 no 2.0 -0.31 20 bmse001100 BMET001100 stop_ loop_ _Chem_comp_bond.ID _Chem_comp_bond.Type _Chem_comp_bond.Value_order _Chem_comp_bond.Atom_ID_1 _Chem_comp_bond.Atom_ID_2 _Chem_comp_bond.Aromatic_flag _Chem_comp_bond.Stereo_config _Chem_comp_bond.Ordinal _Chem_comp_bond.Entry_ID _Chem_comp_bond.Comp_ID 1 ester SING O9 C6 no N 1 bmse001100 BMET001100 2 covalent SING O9 H11 no N 2 bmse001100 BMET001100 3 carbonyl DOUB O10 C6 no N 3 bmse001100 BMET001100 4 covalent SING N8 C5 no N 4 bmse001100 BMET001100 5 covalent SING N8 C4 no N 5 bmse001100 BMET001100 6 covalent SING N8 H16 no N 6 bmse001100 BMET001100 7 covalent SING N7 C3 no N 7 bmse001100 BMET001100 8 covalent DOUB N7 C4 no N 8 bmse001100 BMET001100 9 covalent SING C5 C2 no N 9 bmse001100 BMET001100 10 covalent SING C5 C6 no N 10 bmse001100 BMET001100 11 covalent SING C5 H20 no N 11 bmse001100 BMET001100 12 covalent SING C2 C3 no N 12 bmse001100 BMET001100 13 covalent SING C2 H19 no N 13 bmse001100 BMET001100 14 covalent SING C2 H18 no N 14 bmse001100 BMET001100 15 covalent SING C3 H14 no N 15 bmse001100 BMET001100 16 covalent SING C3 H15 no N 16 bmse001100 BMET001100 17 covalent SING C4 C1 no N 17 bmse001100 BMET001100 18 covalent SING C1 H17 no N 18 bmse001100 BMET001100 19 covalent SING C1 H13 no N 19 bmse001100 BMET001100 20 covalent SING C1 H12 no N 20 bmse001100 BMET001100 stop_ loop_ _Chem_comp_db_link.Author_supplied _Chem_comp_db_link.Database_code _Chem_comp_db_link.Accession_code _Chem_comp_db_link.Accession_code_type _Chem_comp_db_link.Entry_details _Chem_comp_db_link.Entry_ID _Chem_comp_db_link.Comp_ID yes MMCD cq_18997 . . bmse001100 BMET001100 yes PDB 4CS comp_id 'Ligand/non-standard residue in PDB Ligand Expo' bmse001100 BMET001100 yes PubChem 126041 cid . bmse001100 BMET001100 stop_ loop_ _Chem_comp_citation.Citation_ID _Chem_comp_citation.Citation_label _Chem_comp_citation.Entry_ID _Chem_comp_citation.Comp_ID 1 $citation_pubchem bmse001100 BMET001100 stop_ save_ ##################################### # Sample contents and methodology # ##################################### ######################## # Sample description # ######################## save_sample_1 _Sample.Sf_category sample _Sample.Sf_framecode sample_1 _Sample.Entry_ID bmse001100 _Sample.ID 1 _Sample.Type solution loop_ _Sample_component.ID _Sample_component.Mol_common_name _Sample_component.Isotopic_labeling _Sample_component.Assembly_ID _Sample_component.Assembly_label _Sample_component.Entity_ID _Sample_component.Entity_label _Sample_component.Type _Sample_component.Concentration_val _Sample_component.Concentration_val_units _Sample_component.Vendor _Sample_component.Vendor_product_name _Sample_component.Vendor_product_code _Sample_component.Entry_ID _Sample_component.Sample_ID 1 '2-methyl-3,4,5,6-tetrahydropyrimidine-4-carboxylic acid' 'natural abundance' 1 $assembly_1 1 $entity_1 solute 100 mM Sigma-Aldrich Ectoine '81619 Fluka' bmse001100 1 2 D2O . . . . . solvent 100.0 % . . . bmse001100 1 3 DSS . . . . . reference 0.01 mg/mL . . . bmse001100 1 4 'sodium phosphate' . . . . . buffer 50 mM . . . bmse001100 1 5 'sodium azide' . . . . . cytocide 500 uM . . . bmse001100 1 stop_ save_ ####################### # Sample conditions # ####################### save_sample_conditions_1 _Sample_condition_list.Sf_category sample_conditions _Sample_condition_list.Sf_framecode sample_conditions_1 _Sample_condition_list.Entry_ID bmse001100 _Sample_condition_list.ID 1 loop_ _Sample_condition_variable.Type _Sample_condition_variable.Val _Sample_condition_variable.Val_err _Sample_condition_variable.Val_units _Sample_condition_variable.Entry_ID _Sample_condition_variable.Sample_condition_list_ID pH 7.4 0.37 pH bmse001100 1 pressure 1 . atm bmse001100 1 temperature 298 0.1 K bmse001100 1 stop_ save_ ############################ # Computer software used # ############################ save_software_topspin _Software.Sf_category software _Software.Sf_framecode software_topspin _Software.Entry_ID bmse001100 _Software.ID 1 _Software.Name TopSpin _Software.Version 2.1 loop_ _Vendor.Name _Vendor.Electronic_address _Vendor.Entry_ID _Vendor.Software_ID 'Bruker Biospin' http://www.bruker.com/products/mr/nmr/nmr-software/software/topspin/overview.html bmse001100 1 stop_ loop_ _Task.Task _Task.Entry_ID _Task.Software_ID collection bmse001100 1 'data analysis' bmse001100 1 'peak picking' bmse001100 1 processing bmse001100 1 stop_ save_ save_software_nmrbot _Software.Sf_category software _Software.Sf_framecode software_nmrbot _Software.Entry_ID bmse001100 _Software.ID 2 _Software.Name NMRbot _Software.Version 20131115 loop_ _Vendor.Name _Vendor.Electronic_address _Vendor.Entry_ID _Vendor.Software_ID NMRFAM http://www.nmrfam.wisc.edu/software/nmrbot/ bmse001100 2 stop_ loop_ _Task.Task _Task.Entry_ID _Task.Software_ID collection bmse001100 2 stop_ loop_ _Software_citation.Citation_ID _Software_citation.Citation_label _Software_citation.Entry_ID _Software_citation.Software_ID 2 $citation_nmrbot bmse001100 2 stop_ save_ ######################### # Experimental detail # ######################### ################################## # NMR Spectrometer definitions # ################################## save_kerry _NMR_spectrometer.Sf_category NMR_spectrometer _NMR_spectrometer.Sf_framecode kerry _NMR_spectrometer.Entry_ID bmse001100 _NMR_spectrometer.ID 1 _NMR_spectrometer.Details 'equipped with SampleJet automated sample changer' _NMR_spectrometer.Manufacturer Bruker _NMR_spectrometer.Model 'Avance III' _NMR_spectrometer.Field_strength 500 save_ ############################# # NMR applied experiments # ############################# save_experiment_list _Experiment_list.Sf_category experiment_list _Experiment_list.Sf_framecode experiment_list _Experiment_list.Entry_ID bmse001100 _Experiment_list.ID 1 loop_ _Experiment.ID _Experiment.Name _Experiment.Raw_data_flag _Experiment.Sample_ID _Experiment.Sample_label _Experiment.Sample_state _Experiment.Sample_condition_list_ID _Experiment.Sample_condition_list_label _Experiment.NMR_spectrometer_ID _Experiment.NMR_spectrometer_label _Experiment.Entry_ID _Experiment.Experiment_list_ID 1 '1D 1H' yes 1 $sample_1 isotropic 1 $sample_conditions_1 1 $kerry bmse001100 1 2 '2D 1H-1H TOCSY' yes 1 $sample_1 isotropic 1 $sample_conditions_1 1 $kerry bmse001100 1 3 '1D 13C' yes 1 $sample_1 isotropic 1 $sample_conditions_1 1 $kerry bmse001100 1 4 '1D DEPT90' yes 1 $sample_1 isotropic 1 $sample_conditions_1 1 $kerry bmse001100 1 5 '1D DEPT135' yes 1 $sample_1 isotropic 1 $sample_conditions_1 1 $kerry bmse001100 1 6 '2D 1H-13C HSQC' yes 1 $sample_1 isotropic 1 $sample_conditions_1 1 $kerry bmse001100 1 7 '2D 1H-13C HSQC SW small' yes 1 $sample_1 isotropic 1 $sample_conditions_1 1 $kerry bmse001100 1 8 '2D 1H-13C HMBC' yes 1 $sample_1 isotropic 1 $sample_conditions_1 1 $kerry bmse001100 1 9 '2D 1H-1H COSY' yes 1 $sample_1 isotropic 1 $sample_conditions_1 1 $kerry bmse001100 1 10 '2D 1H-13C HSQC-TOCSY-ADIA' yes 1 $sample_1 isotropic 1 $sample_conditions_1 1 $kerry bmse001100 1 stop_ loop_ _Experiment_file.Experiment_ID _Experiment_file.Name _Experiment_file.Type _Experiment_file.Directory_path _Experiment_file.Details _Experiment_file.Entry_ID _Experiment_file.Experiment_list_ID 1 1D_1H text/directory nmr/set01 'NMR experiment directory' bmse001100 1 1 1D_1H.xml text/xml nmr/set01/transitions/1D_1H 'TopSpin peak list' bmse001100 1 1 1D_1H_0.png image/png nmr/set01/spectra/1D_1H 'Spectral image' bmse001100 1 2 2D_1H-1H_TOCSY text/directory nmr/set01 'NMR experiment directory' bmse001100 1 2 2D_1H-1H_TOCSY_0.png image/png nmr/set01/spectra/2D_1H-1H_TOCSY 'Spectral image' bmse001100 1 3 1D_13C text/directory nmr/set01 'NMR experiment directory' bmse001100 1 3 1D_13C.xml text/xml nmr/set01/transitions/1D_13C 'TopSpin peak list' bmse001100 1 3 1D_13C_0.png image/png nmr/set01/spectra/1D_13C 'Spectral image' bmse001100 1 4 1D_DEPT90 text/directory nmr/set01 'NMR experiment directory' bmse001100 1 4 1D_DEPT90.xml text/xml nmr/set01/transitions/1D_DEPT90 'TopSpin peak list' bmse001100 1 4 1D_DEPT90_0.png image/png nmr/set01/spectra/1D_DEPT90 'Spectral image' bmse001100 1 5 1D_DEPT135 text/directory nmr/set01 'NMR experiment directory' bmse001100 1 5 1D_DEPT135.xml text/xml nmr/set01/transitions/1D_DEPT135 'TopSpin peak list' bmse001100 1 5 1D_DEPT135_0.png image/png nmr/set01/spectra/1D_DEPT135 'Spectral image' bmse001100 1 6 2D_1H-13C_HSQC text/directory nmr/set01 'NMR experiment directory' bmse001100 1 6 2D_1H-13C_HSQC.xml text/xml nmr/set01/transitions/2D_1H-13C_HSQC 'TopSpin peak list' bmse001100 1 6 2D_1H-13C_HSQC_0.png image/png nmr/set01/spectra/2D_1H-13C_HSQC 'Spectral image' bmse001100 1 7 2D_1H-13C_HSQC_SW_small text/directory nmr/set01 'NMR experiment directory' bmse001100 1 8 2D_1H-13C_HMBC text/directory nmr/set01 'NMR experiment directory' bmse001100 1 8 2D_1H-13C_HMBC_0.png image/png nmr/set01/spectra/2D_1H-13C_HMBC 'Spectral image' bmse001100 1 9 2D_1H-1H_COSY text/directory nmr/set01 'NMR experiment directory' bmse001100 1 9 2D_1H-1H_COSY_0.png image/png nmr/set01/spectra/2D_1H-1H_COSY 'Spectral image' bmse001100 1 10 2D_1H-13C_HSQC-TOCSY-ADIA text/directory nmr/set01 'NMR experiment directory' bmse001100 1 10 2D_1H-13C_HSQC-TOCSY-ADIA_0.png image/png nmr/set01/spectra/2D_1H-13C_HSQC-TOCSY-ADIA 'Spectral image' bmse001100 1 stop_ save_ #################### # NMR parameters # #################### ############################## # Assigned chemical shifts # ############################## ################################ # Chemical shift referencing # ################################ save_chem_shift_ref_set01 _Chem_shift_reference.Sf_category chem_shift_reference _Chem_shift_reference.Sf_framecode chem_shift_ref_set01 _Chem_shift_reference.Entry_ID bmse001100 _Chem_shift_reference.ID 1 loop_ _Chem_shift_ref.Atom_type _Chem_shift_ref.Atom_isotope_number _Chem_shift_ref.Mol_common_name _Chem_shift_ref.Atom_group _Chem_shift_ref.Chem_shift_units _Chem_shift_ref.Chem_shift_val _Chem_shift_ref.Ref_method _Chem_shift_ref.Ref_type _Chem_shift_ref.Indirect_shift_ratio _Chem_shift_ref.Entry_ID _Chem_shift_ref.Chem_shift_reference_ID C 13 DSS 'methyl carbons' ppm 0.0 internal direct 1.0 bmse001100 1 H 1 DSS 'methyl protons' ppm 0.0 internal direct 1.0 bmse001100 1 stop_ save_ ################################### # Assigned chemical shift lists # ################################### ################################################################### # Chemical Shift Ambiguity Index Value Definitions # # # # The values other than 1 are used for those atoms with different # # chemical shifts that cannot be assigned to stereospecific atoms # # or to specific residues or chains. # # # # Index Value Definition # # # # 1 Unique (including isolated methyl protons, # # geminal atoms, and geminal methyl # # groups with identical chemical shifts) # # (e.g. ILE HD11, HD12, HD13 protons) # # 2 Ambiguity of geminal atoms or geminal methyl # # proton groups (e.g. ASP HB2 and HB3 # # protons, LEU CD1 and CD2 carbons, or # # LEU HD11, HD12, HD13 and HD21, HD22, # # HD23 methyl protons) # # 3 Aromatic atoms on opposite sides of # # symmetrical rings (e.g. TYR HE1 and HE2 # # protons) # # 4 Intraresidue ambiguities (e.g. LYS HG and # # HD protons or TRP HZ2 and HZ3 protons) # # 5 Interresidue ambiguities (LYS 12 vs. LYS 27) # # 6 Intermolecular ambiguities (e.g. ASP 31 CA # # in monomer 1 and ASP 31 CA in monomer 2 # # of an asymmetrical homodimer, duplex # # DNA assignments, or other assignments # # that may apply to atoms in one or more # # molecule in the molecular assembly) # # 9 Ambiguous, specific ambiguity not defined # # # ################################################################### save_chem_shift_set01 _Assigned_chem_shift_list.Sf_category assigned_chemical_shifts _Assigned_chem_shift_list.Sf_framecode chem_shift_set01 _Assigned_chem_shift_list.Entry_ID bmse001100 _Assigned_chem_shift_list.ID 1 _Assigned_chem_shift_list.Sample_condition_list_ID 1 _Assigned_chem_shift_list.Sample_condition_list_label $sample_conditions_1 _Assigned_chem_shift_list.Chem_shift_reference_ID 1 _Assigned_chem_shift_list.Chem_shift_reference_label $chem_shift_ref_set01 loop_ _Chem_shift_experiment.Experiment_ID _Chem_shift_experiment.Experiment_name _Chem_shift_experiment.Sample_ID _Chem_shift_experiment.Sample_label _Chem_shift_experiment.Entry_ID _Chem_shift_experiment.Assigned_chem_shift_list_ID 1 '1D 1H' 1 $sample_1 bmse001100 1 2 '2D 1H-1H TOCSY' 1 $sample_1 bmse001100 1 3 '1D 13C' 1 $sample_1 bmse001100 1 4 '1D DEPT90' 1 $sample_1 bmse001100 1 5 '1D DEPT135' 1 $sample_1 bmse001100 1 6 '2D 1H-13C HSQC' 1 $sample_1 bmse001100 1 8 '2D 1H-13C HMBC' 1 $sample_1 bmse001100 1 9 '2D 1H-1H COSY' 1 $sample_1 bmse001100 1 10 '2D 1H-13C HSQC-TOCSY-ADIA' 1 $sample_1 bmse001100 1 stop_ loop_ _Chem_shift_software.Software_ID _Chem_shift_software.Software_label _Chem_shift_software.Entry_ID _Chem_shift_software.Assigned_chem_shift_list_ID 1 $software_topspin bmse001100 1 stop_ loop_ _Atom_chem_shift.ID _Atom_chem_shift.Assembly_atom_ID _Atom_chem_shift.Entity_assembly_ID _Atom_chem_shift.Entity_ID _Atom_chem_shift.Comp_index_ID _Atom_chem_shift.Comp_ID _Atom_chem_shift.Atom_ID _Atom_chem_shift.Atom_type _Atom_chem_shift.Atom_isotope_number _Atom_chem_shift.Val _Atom_chem_shift.Ambiguity_code _Atom_chem_shift.Entry_ID _Atom_chem_shift.Assigned_chem_shift_list_ID 1 5 1 1 1 BMET001100 C5 C 13 55.842 1 bmse001100 1 2 6 1 1 1 BMET001100 C2 C 13 24.112 1 bmse001100 1 3 7 1 1 1 BMET001100 C3 C 13 39.8986 1 bmse001100 1 4 8 1 1 1 BMET001100 C4 C 13 163.1828 1 bmse001100 1 5 9 1 1 1 BMET001100 C6 C 13 179.524 1 bmse001100 1 6 10 1 1 1 BMET001100 C1 C 13 20.8583 1 bmse001100 1 7 11 1 1 1 BMET001100 H20 H 1 4.0548 1 bmse001100 1 8 12 1 1 1 BMET001100 H19 H 1 2.1071 1 bmse001100 1 9 13 1 1 1 BMET001100 H18 H 1 2.1071 1 bmse001100 1 10 14 1 1 1 BMET001100 H14 H 1 3.277 2 bmse001100 1 11 15 1 1 1 BMET001100 H15 H 1 3.4405 2 bmse001100 1 12 17 1 1 1 BMET001100 H17 H 1 2.2226 1 bmse001100 1 13 18 1 1 1 BMET001100 H13 H 1 2.2226 1 bmse001100 1 14 19 1 1 1 BMET001100 H12 H 1 2.2226 1 bmse001100 1 stop_ save_ ######################### # Spectral peak lists # ######################### save_spectral_peaks_1D_1H_set01 _Spectral_peak_list.Sf_category spectral_peak_list _Spectral_peak_list.Sf_framecode spectral_peaks_1D_1H_set01 _Spectral_peak_list.Entry_ID bmse001100 _Spectral_peak_list.ID 1 _Spectral_peak_list.Sample_ID 1 _Spectral_peak_list.Sample_label $sample_1 _Spectral_peak_list.Sample_condition_list_ID 1 _Spectral_peak_list.Sample_condition_list_label $sample_conditions_1 _Spectral_peak_list.Experiment_ID 1 _Spectral_peak_list.Experiment_name '1D 1H' _Spectral_peak_list.Number_of_spectral_dimensions 1 _Spectral_peak_list.Details 'F1: 1H' loop_ _Spectral_dim.ID _Spectral_dim.Atom_type _Spectral_dim.Atom_isotope_number _Spectral_dim.Spectral_region _Spectral_dim.Sweep_width _Spectral_dim.Sweep_width_units _Spectral_dim.Entry_ID _Spectral_dim.Spectral_peak_list_ID 1 H 1 'Full H' 16.0307 ppm bmse001100 1 stop_ loop_ _Spectral_peak_software.Software_ID _Spectral_peak_software.Software_label _Spectral_peak_software.Entry_ID _Spectral_peak_software.Spectral_peak_list_ID 1 $software_topspin bmse001100 1 stop_ loop_ _Spectral_transition.ID _Spectral_transition.Entry_ID _Spectral_transition.Spectral_peak_list_ID 1 bmse001100 1 2 bmse001100 1 3 bmse001100 1 4 bmse001100 1 5 bmse001100 1 6 bmse001100 1 7 bmse001100 1 8 bmse001100 1 9 bmse001100 1 10 bmse001100 1 11 bmse001100 1 12 bmse001100 1 13 bmse001100 1 14 bmse001100 1 15 bmse001100 1 16 bmse001100 1 17 bmse001100 1 18 bmse001100 1 19 bmse001100 1 20 bmse001100 1 21 bmse001100 1 22 bmse001100 1 23 bmse001100 1 24 bmse001100 1 25 bmse001100 1 26 bmse001100 1 27 bmse001100 1 28 bmse001100 1 29 bmse001100 1 30 bmse001100 1 31 bmse001100 1 32 bmse001100 1 33 bmse001100 1 34 bmse001100 1 35 bmse001100 1 stop_ loop_ _Spectral_transition_general_char.Spectral_transition_ID _Spectral_transition_general_char.Intensity_val _Spectral_transition_general_char.Measurement_method _Spectral_transition_general_char.Entry_ID _Spectral_transition_general_char.Spectral_peak_list_ID 1 0.94 'relative height' bmse001100 1 2 1.71 'relative height' bmse001100 1 3 0.81 'relative height' bmse001100 1 4 0.57 'relative height' bmse001100 1 5 1.01 'relative height' bmse001100 1 6 0.64 'relative height' bmse001100 1 7 0.77 'relative height' bmse001100 1 8 1.31 'relative height' bmse001100 1 9 0.67 'relative height' bmse001100 1 10 0.82 'relative height' bmse001100 1 11 0.89 'relative height' bmse001100 1 12 0.84 'relative height' bmse001100 1 13 1.24 'relative height' bmse001100 1 14 0.59 'relative height' bmse001100 1 15 0.57 'relative height' bmse001100 1 16 0.51 'relative height' bmse001100 1 17 0.35 'relative height' bmse001100 1 18 15.00 'relative height' bmse001100 1 19 0.30 'relative height' bmse001100 1 20 0.56 'relative height' bmse001100 1 21 0.37 'relative height' bmse001100 1 22 0.41 'relative height' bmse001100 1 23 1.13 'relative height' bmse001100 1 24 1.52 'relative height' bmse001100 1 25 0.96 'relative height' bmse001100 1 26 0.86 'relative height' bmse001100 1 27 1.36 'relative height' bmse001100 1 28 0.89 'relative height' bmse001100 1 29 0.84 'relative height' bmse001100 1 30 1.60 'relative height' bmse001100 1 31 1.74 'relative height' bmse001100 1 32 0.45 'relative height' bmse001100 1 33 0.74 'relative height' bmse001100 1 34 0.64 'relative height' bmse001100 1 35 0.60 'relative height' bmse001100 1 stop_ loop_ _Spectral_transition_char.Spectral_transition_ID _Spectral_transition_char.Spectral_dim_ID _Spectral_transition_char.Chem_shift_val _Spectral_transition_char.Entry_ID _Spectral_transition_char.Spectral_peak_list_ID 1 1 4.0694 bmse001100 1 2 1 4.0586 bmse001100 1 3 1 4.0478 bmse001100 1 4 1 3.4692 bmse001100 1 5 1 3.4588 bmse001100 1 6 1 3.4477 bmse001100 1 7 1 3.4417 bmse001100 1 8 1 3.4311 bmse001100 1 9 1 3.4206 bmse001100 1 10 1 3.3038 bmse001100 1 11 1 3.2943 bmse001100 1 12 1 3.2871 bmse001100 1 13 1 3.2769 bmse001100 1 14 1 3.2666 bmse001100 1 15 1 3.2595 bmse001100 1 16 1 3.2499 bmse001100 1 17 1 2.2898 bmse001100 1 18 1 2.2249 bmse001100 1 19 1 2.1710 bmse001100 1 20 1 2.1611 bmse001100 1 21 1 2.1540 bmse001100 1 22 1 2.1509 bmse001100 1 23 1 2.1437 bmse001100 1 24 1 2.1335 bmse001100 1 25 1 2.1264 bmse001100 1 26 1 2.1234 bmse001100 1 27 1 2.1165 bmse001100 1 28 1 2.1098 bmse001100 1 29 1 2.1066 bmse001100 1 30 1 2.0994 bmse001100 1 31 1 2.0886 bmse001100 1 32 1 2.0824 bmse001100 1 33 1 2.0773 bmse001100 1 34 1 2.0711 bmse001100 1 35 1 2.0608 bmse001100 1 stop_ save_ save_spectral_peaks_1D_13C_set01 _Spectral_peak_list.Sf_category spectral_peak_list _Spectral_peak_list.Sf_framecode spectral_peaks_1D_13C_set01 _Spectral_peak_list.Entry_ID bmse001100 _Spectral_peak_list.ID 3 _Spectral_peak_list.Sample_ID 1 _Spectral_peak_list.Sample_label $sample_1 _Spectral_peak_list.Sample_condition_list_ID 1 _Spectral_peak_list.Sample_condition_list_label $sample_conditions_1 _Spectral_peak_list.Experiment_ID 3 _Spectral_peak_list.Experiment_name '1D 13C' _Spectral_peak_list.Number_of_spectral_dimensions 1 _Spectral_peak_list.Details 'F1: 13C' loop_ _Spectral_dim.ID _Spectral_dim.Atom_type _Spectral_dim.Atom_isotope_number _Spectral_dim.Spectral_region _Spectral_dim.Sweep_width _Spectral_dim.Sweep_width_units _Spectral_dim.Entry_ID _Spectral_dim.Spectral_peak_list_ID 1 C 13 'Full C' 236.7742 ppm bmse001100 3 stop_ loop_ _Spectral_peak_software.Software_ID _Spectral_peak_software.Software_label _Spectral_peak_software.Entry_ID _Spectral_peak_software.Spectral_peak_list_ID 1 $software_topspin bmse001100 3 stop_ loop_ _Spectral_transition.ID _Spectral_transition.Entry_ID _Spectral_transition.Spectral_peak_list_ID 1 bmse001100 3 2 bmse001100 3 3 bmse001100 3 4 bmse001100 3 5 bmse001100 3 6 bmse001100 3 stop_ loop_ _Spectral_transition_general_char.Spectral_transition_ID _Spectral_transition_general_char.Intensity_val _Spectral_transition_general_char.Measurement_method _Spectral_transition_general_char.Entry_ID _Spectral_transition_general_char.Spectral_peak_list_ID 1 7.27 'relative height' bmse001100 3 2 2.48 'relative height' bmse001100 3 3 14.44 'relative height' bmse001100 3 4 7.61 'relative height' bmse001100 3 5 13.40 'relative height' bmse001100 3 6 15.00 'relative height' bmse001100 3 stop_ loop_ _Spectral_transition_char.Spectral_transition_ID _Spectral_transition_char.Spectral_dim_ID _Spectral_transition_char.Chem_shift_val _Spectral_transition_char.Entry_ID _Spectral_transition_char.Spectral_peak_list_ID 1 1 179.5240 bmse001100 3 2 1 163.1828 bmse001100 3 3 1 55.8566 bmse001100 3 4 1 39.8806 bmse001100 3 5 1 24.0959 bmse001100 3 6 1 20.8511 bmse001100 3 stop_ loop_ _Assigned_spectral_transition.Spectral_transition_ID _Assigned_spectral_transition.Spectral_dim_ID _Assigned_spectral_transition.Assembly_atom_ID _Assigned_spectral_transition.Val _Assigned_spectral_transition.Assigned_chem_shift_list_ID _Assigned_spectral_transition.Atom_chem_shift_ID _Assigned_spectral_transition.Entity_assembly_ID _Assigned_spectral_transition.Entity_ID _Assigned_spectral_transition.Comp_index_ID _Assigned_spectral_transition.Comp_ID _Assigned_spectral_transition.Atom_ID _Assigned_spectral_transition.Entry_ID _Assigned_spectral_transition.Spectral_peak_list_ID 1 1 9 179.5240 1 5 1 1 1 BMET001100 C6 bmse001100 3 2 1 8 163.1828 1 4 1 1 1 BMET001100 C4 bmse001100 3 3 1 5 55.8566 1 1 1 1 1 BMET001100 C5 bmse001100 3 4 1 7 39.8806 1 3 1 1 1 BMET001100 C3 bmse001100 3 5 1 6 24.0959 1 2 1 1 1 BMET001100 C2 bmse001100 3 6 1 10 20.8511 1 6 1 1 1 BMET001100 C1 bmse001100 3 stop_ save_ save_spectral_peaks_1D_DEPT90_set01 _Spectral_peak_list.Sf_category spectral_peak_list _Spectral_peak_list.Sf_framecode spectral_peaks_1D_DEPT90_set01 _Spectral_peak_list.Entry_ID bmse001100 _Spectral_peak_list.ID 4 _Spectral_peak_list.Sample_ID 1 _Spectral_peak_list.Sample_label $sample_1 _Spectral_peak_list.Sample_condition_list_ID 1 _Spectral_peak_list.Sample_condition_list_label $sample_conditions_1 _Spectral_peak_list.Experiment_ID 4 _Spectral_peak_list.Experiment_name '1D DEPT90' _Spectral_peak_list.Number_of_spectral_dimensions 1 _Spectral_peak_list.Details 'F1: 13C' loop_ _Spectral_dim.ID _Spectral_dim.Atom_type _Spectral_dim.Atom_isotope_number _Spectral_dim.Spectral_region _Spectral_dim.Sweep_width _Spectral_dim.Sweep_width_units _Spectral_dim.Entry_ID _Spectral_dim.Spectral_peak_list_ID 1 C 13 'Full C' 236.7742 ppm bmse001100 4 stop_ loop_ _Spectral_peak_software.Software_ID _Spectral_peak_software.Software_label _Spectral_peak_software.Entry_ID _Spectral_peak_software.Spectral_peak_list_ID 1 $software_topspin bmse001100 4 stop_ loop_ _Spectral_transition.ID _Spectral_transition.Entry_ID _Spectral_transition.Spectral_peak_list_ID 1 bmse001100 4 stop_ loop_ _Spectral_transition_general_char.Spectral_transition_ID _Spectral_transition_general_char.Intensity_val _Spectral_transition_general_char.Measurement_method _Spectral_transition_general_char.Entry_ID _Spectral_transition_general_char.Spectral_peak_list_ID 1 15.00 'relative height' bmse001100 4 stop_ loop_ _Spectral_transition_char.Spectral_transition_ID _Spectral_transition_char.Spectral_dim_ID _Spectral_transition_char.Chem_shift_val _Spectral_transition_char.Entry_ID _Spectral_transition_char.Spectral_peak_list_ID 1 1 55.8546 bmse001100 4 stop_ save_ save_spectral_peaks_1D_DEPT135_set01 _Spectral_peak_list.Sf_category spectral_peak_list _Spectral_peak_list.Sf_framecode spectral_peaks_1D_DEPT135_set01 _Spectral_peak_list.Entry_ID bmse001100 _Spectral_peak_list.ID 5 _Spectral_peak_list.Sample_ID 1 _Spectral_peak_list.Sample_label $sample_1 _Spectral_peak_list.Sample_condition_list_ID 1 _Spectral_peak_list.Sample_condition_list_label $sample_conditions_1 _Spectral_peak_list.Experiment_ID 5 _Spectral_peak_list.Experiment_name '1D DEPT135' _Spectral_peak_list.Number_of_spectral_dimensions 1 _Spectral_peak_list.Details 'F1: 13C' loop_ _Spectral_dim.ID _Spectral_dim.Atom_type _Spectral_dim.Atom_isotope_number _Spectral_dim.Spectral_region _Spectral_dim.Sweep_width _Spectral_dim.Sweep_width_units _Spectral_dim.Entry_ID _Spectral_dim.Spectral_peak_list_ID 1 C 13 'Full C' 236.7742 ppm bmse001100 5 stop_ loop_ _Spectral_peak_software.Software_ID _Spectral_peak_software.Software_label _Spectral_peak_software.Entry_ID _Spectral_peak_software.Spectral_peak_list_ID 1 $software_topspin bmse001100 5 stop_ loop_ _Spectral_transition.ID _Spectral_transition.Entry_ID _Spectral_transition.Spectral_peak_list_ID 1 bmse001100 5 2 bmse001100 5 3 bmse001100 5 4 bmse001100 5 stop_ loop_ _Spectral_transition_general_char.Spectral_transition_ID _Spectral_transition_general_char.Intensity_val _Spectral_transition_general_char.Measurement_method _Spectral_transition_general_char.Entry_ID _Spectral_transition_general_char.Spectral_peak_list_ID 1 8.92 'relative height' bmse001100 5 2 -14.23 'relative height' bmse001100 5 3 -15.00 'relative height' bmse001100 5 4 8.72 'relative height' bmse001100 5 stop_ loop_ _Spectral_transition_char.Spectral_transition_ID _Spectral_transition_char.Spectral_dim_ID _Spectral_transition_char.Chem_shift_val _Spectral_transition_char.Entry_ID _Spectral_transition_char.Spectral_peak_list_ID 1 1 55.8635 bmse001100 5 2 1 39.8858 bmse001100 5 3 1 24.1028 bmse001100 5 4 1 20.8583 bmse001100 5 stop_ save_ save_spectral_peaks_2D_1H_13C_HSQC_set01 _Spectral_peak_list.Sf_category spectral_peak_list _Spectral_peak_list.Sf_framecode spectral_peaks_2D_1H_13C_HSQC_set01 _Spectral_peak_list.Entry_ID bmse001100 _Spectral_peak_list.ID 6 _Spectral_peak_list.Sample_ID 1 _Spectral_peak_list.Sample_label $sample_1 _Spectral_peak_list.Sample_condition_list_ID 1 _Spectral_peak_list.Sample_condition_list_label $sample_conditions_1 _Spectral_peak_list.Experiment_ID 6 _Spectral_peak_list.Experiment_name '2D 1H-13C HSQC' _Spectral_peak_list.Number_of_spectral_dimensions 2 _Spectral_peak_list.Details 'F1: 13C, F2: 1H' loop_ _Spectral_dim.ID _Spectral_dim.Atom_type _Spectral_dim.Atom_isotope_number _Spectral_dim.Spectral_region _Spectral_dim.Sweep_width _Spectral_dim.Sweep_width_units _Spectral_dim.Entry_ID _Spectral_dim.Spectral_peak_list_ID 1 C 13 'Full C' 165.6393 ppm bmse001100 6 2 H 1 'Full H' 13.3375 ppm bmse001100 6 stop_ loop_ _Spectral_peak_software.Software_ID _Spectral_peak_software.Software_label _Spectral_peak_software.Entry_ID _Spectral_peak_software.Spectral_peak_list_ID 1 $software_topspin bmse001100 6 stop_ loop_ _Spectral_transition.ID _Spectral_transition.Entry_ID _Spectral_transition.Spectral_peak_list_ID 1 bmse001100 6 2 bmse001100 6 3 bmse001100 6 4 bmse001100 6 5 bmse001100 6 stop_ loop_ _Spectral_transition_general_char.Spectral_transition_ID _Spectral_transition_general_char.Intensity_val _Spectral_transition_general_char.Measurement_method _Spectral_transition_general_char.Entry_ID _Spectral_transition_general_char.Spectral_peak_list_ID 1 997949.58 'absolute height' bmse001100 6 2 650154.54 'absolute height' bmse001100 6 3 633128.20 'absolute height' bmse001100 6 4 780236.71 'absolute height' bmse001100 6 5 1753603.95 'absolute height' bmse001100 6 stop_ loop_ _Spectral_transition_char.Spectral_transition_ID _Spectral_transition_char.Spectral_dim_ID _Spectral_transition_char.Chem_shift_val _Spectral_transition_char.Entry_ID _Spectral_transition_char.Spectral_peak_list_ID 1 1 55.8420 bmse001100 6 1 2 4.0548 bmse001100 6 2 1 39.8986 bmse001100 6 2 2 3.4405 bmse001100 6 3 1 39.9139 bmse001100 6 3 2 3.2770 bmse001100 6 4 1 24.1120 bmse001100 6 4 2 2.1071 bmse001100 6 5 1 20.8289 bmse001100 6 5 2 2.2226 bmse001100 6 stop_ save_