data_bmse011715 ####################### # Entry information # ####################### save_entry_information _Entry.Sf_category entry_information _Entry.Sf_framecode entry_information _Entry.ID bmse011715 _Entry.Title ; NMR quality control of fragment libraries for screening ; _Entry.Type 'compound library' _Entry.Version_type original _Entry.Submission_date 2020-09-15 _Entry.Accession_date 2020-09-15 _Entry.Last_release_date 2020-09-15 _Entry.Original_release_date 2020-09-15 _Entry.Origination author _Entry.NMR_STAR_version 3.2.0.16 _Entry.Original_NMR_STAR_version 3.2.0.16 _Entry.Experimental_method NMR _Entry.Experimental_method_subtype solution _Entry.DOI 10.12018/bmse011715 loop_ _Entry_experimental_methods.ID _Entry_experimental_methods.Method _Entry_experimental_methods.Subtype _Entry_experimental_methods.Entry_ID 1 NMR solution bmse011715 stop_ loop_ _Entry_author.Ordinal _Entry_author.Given_name _Entry_author.Family_name _Entry_author.First_initial _Entry_author.Middle_initials _Entry_author.Entry_ID 1 Sridhar Sreeramulu S. . bmse011715 2 Christian Richter C. . bmse011715 3 Till Kuehn T. . bmse011715 4 Kamal Azzaoui K. . bmse011715 5 Marcel Blommers M. J.J. bmse011715 6 Rebecca 'Del Conte' R. . bmse011715 7 Marco Fragai M. . bmse011715 8 Nils Trieloff N. . bmse011715 9 Peter Schmieder P. . bmse011715 10 Marc Nazare M. . bmse011715 11 Edgar Specker E. . bmse011715 12 Vladimir Ivanov V. . bmse011715 13 Hartmut Oschkinat H. . bmse011715 14 Lucia Banci L. . bmse011715 15 Harald Schwalbe H. . bmse011715 stop_ loop_ _Entry_src.ID _Entry_src.Project_name _Entry_src.Organization_full_name _Entry_src.Entry_ID 1 iNEXT 'Infrastructure for NMR' bmse011715 stop_ loop_ _Data_set.Type _Data_set.Count _Data_set.Entry_ID spectral_peak_list 1 bmse011715 stop_ loop_ _Datum.Type _Datum.Count _Datum.Entry_ID '1H chemical shifts' 10 bmse011715 stop_ loop_ _Release.Release_number _Release.Format_type _Release.Format_version _Release.Date _Release.Type _Release.Author _Release.Entry_ID 1 NMR-STAR 3.2.11.4 2020-09-15 original author bmse011715 stop_ loop_ _Auxiliary_files.ID _Auxiliary_files.Name _Auxiliary_files.Format _Auxiliary_files.URI _Auxiliary_files.Details _Auxiliary_files.Entry_ID 3 bmse011715.sdf sdf na 'Structure Definition File' bmse011715 stop_ save_ ############### # Citations # ############### save_entry_citation _Citation.Sf_category citations _Citation.Sf_framecode entry_citation _Citation.Entry_ID bmse011715 _Citation.ID 1 _Citation.Class 'entry citation' _Citation.DOI 10.1007/s10858-020-00327-9 _Citation.Title ; NMR quality control of fragment libraries for screening ; _Citation.Status published _Citation.Type 'open access' _Citation.Journal_abbrev 'J. Biomol. NMR' _Citation.Year 2020 loop_ _Citation_author.Ordinal _Citation_author.Given_name _Citation_author.Family_name _Citation_author.First_initial _Citation_author.Middle_initials _Citation_author.Entry_ID _Citation_author.Citation_ID 1 Sridhar Sreeramulu S. . bmse011715 1 2 Christian Richter C. . bmse011715 1 3 Till Kuehn T. . bmse011715 1 4 Kamal Azzaoui K. . bmse011715 1 5 Marcel Blommers M. J.J. bmse011715 1 6 Rebecca 'Del Conte' R. . bmse011715 1 7 Marco Fragai M. . bmse011715 1 8 Nils Trieloff N. . bmse011715 1 9 Peter Schmieder P. . bmse011715 1 10 Marc Nazare M. . bmse011715 1 11 Edgar Specker E. . bmse011715 1 12 Vladimir Ivanov V. . bmse011715 1 13 Hartmut Oschkinat H. . bmse011715 1 14 Lucia Banci L. . bmse011715 1 15 Harald Schwalbe H. . bmse011715 1 stop_ save_ ############################################# # Molecular system (assembly) description # ############################################# save_assembly_1 _Assembly.Sf_category assembly _Assembly.Sf_framecode assembly_1 _Assembly.Entry_ID bmse011715 _Assembly.ID 1 _Assembly.Name N-[(4-methoxyphenyl)methyl]cyclopentanamine _Assembly.Number_of_components 1 _Assembly.Paramagnetic no _Assembly.Thiol_state na loop_ _Entity_assembly.ID _Entity_assembly.Entity_assembly_name _Entity_assembly.Entity_ID _Entity_assembly.Entity_label _Entity_assembly.Experimental_data_reported _Entity_assembly.Physical_state _Entity_assembly.Conformational_isomer _Entity_assembly.Chemical_exchange_state _Entity_assembly.Entry_ID _Entity_assembly.Assembly_ID 1 Z2856434940 1 $entity_1 yes native no no bmse011715 1 stop_ loop_ _Atom.Assembly_atom_ID _Atom.Entity_assembly_ID _Atom.Entity_ID _Atom.Comp_index_ID _Atom.Seq_ID _Atom.Comp_ID _Atom.Atom_ID _Atom.Type_symbol _Atom.Entry_ID _Atom.Assembly_ID 1 1 1 1 1 Z2856434940 C1 C bmse011715 1 2 1 1 1 1 Z2856434940 C2 C bmse011715 1 3 1 1 1 1 Z2856434940 C3 C bmse011715 1 4 1 1 1 1 Z2856434940 C4 C bmse011715 1 5 1 1 1 1 Z2856434940 C5 C bmse011715 1 6 1 1 1 1 Z2856434940 C6 C bmse011715 1 7 1 1 1 1 Z2856434940 C7 C bmse011715 1 8 1 1 1 1 Z2856434940 C8 C bmse011715 1 9 1 1 1 1 Z2856434940 C9 C bmse011715 1 10 1 1 1 1 Z2856434940 C10 C bmse011715 1 11 1 1 1 1 Z2856434940 C11 C bmse011715 1 12 1 1 1 1 Z2856434940 C12 C bmse011715 1 13 1 1 1 1 Z2856434940 C13 C bmse011715 1 14 1 1 1 1 Z2856434940 N14 N bmse011715 1 15 1 1 1 1 Z2856434940 O15 O bmse011715 1 16 1 1 1 1 Z2856434940 H16 H bmse011715 1 17 1 1 1 1 Z2856434940 H17 H bmse011715 1 18 1 1 1 1 Z2856434940 H18 H bmse011715 1 19 1 1 1 1 Z2856434940 H19 H bmse011715 1 20 1 1 1 1 Z2856434940 H20 H bmse011715 1 21 1 1 1 1 Z2856434940 H21 H bmse011715 1 22 1 1 1 1 Z2856434940 H22 H bmse011715 1 23 1 1 1 1 Z2856434940 H23 H bmse011715 1 24 1 1 1 1 Z2856434940 H24 H bmse011715 1 25 1 1 1 1 Z2856434940 H25 H bmse011715 1 26 1 1 1 1 Z2856434940 H26 H bmse011715 1 27 1 1 1 1 Z2856434940 H27 H bmse011715 1 28 1 1 1 1 Z2856434940 H28 H bmse011715 1 29 1 1 1 1 Z2856434940 H29 H bmse011715 1 30 1 1 1 1 Z2856434940 H30 H bmse011715 1 31 1 1 1 1 Z2856434940 H31 H bmse011715 1 32 1 1 1 1 Z2856434940 H32 H bmse011715 1 33 1 1 1 1 Z2856434940 H33 H bmse011715 1 34 1 1 1 1 Z2856434940 H34 H bmse011715 1 stop_ save_ #################################### # Biological polymers and ligands # #################################### save_entity_1 _Entity.Sf_category entity _Entity.Sf_framecode entity_1 _Entity.Entry_ID bmse011715 _Entity.ID 1 _Entity.Name N-[(4-methoxyphenyl)methyl]cyclopentanamine _Entity.Type non-polymer _Entity.Ambiguous_conformational_states no _Entity.Ambiguous_chem_comp_sites no _Entity.Nstd_linkage no _Entity.Nonpolymer_comp_ID Z2856434940 _Entity.Nonpolymer_comp_label $chem_comp_1 _Entity.Number_of_monomers 1 _Entity.Number_of_nonpolymer_components 1 _Entity.Paramagnetic no _Entity.Thiol_state 'not present' _Entity.Formula_weight 205.2960599999998 loop_ _Entity_comp_index.ID _Entity_comp_index.Auth_seq_ID _Entity_comp_index.Comp_ID _Entity_comp_index.Comp_label _Entity_comp_index.Entry_ID _Entity_comp_index.Entity_ID 1 1 Z2856434940 $chem_comp_1 bmse011715 1 stop_ save_ #################### # Natural source # #################### save_natural_source _Entity_natural_src_list.Sf_category natural_source _Entity_natural_src_list.Sf_framecode natural_source _Entity_natural_src_list.Entry_ID bmse011715 _Entity_natural_src_list.ID 1 loop_ _Entity_natural_src.ID _Entity_natural_src.Entity_ID _Entity_natural_src.Entity_label _Entity_natural_src.NCBI_taxonomy_ID _Entity_natural_src.Type _Entity_natural_src.Common _Entity_natural_src.Organism_name_scientific _Entity_natural_src.Organism_name_common _Entity_natural_src.Superkingdom _Entity_natural_src.Genus _Entity_natural_src.Species _Entity_natural_src.Entry_ID _Entity_natural_src.Entity_natural_src_list_ID 1 1 $entity_1 na na yes na na na na na bmse011715 1 stop_ save_ ######################### # Experimental source # ######################### save_experimental_source _Entity_experimental_src_list.Sf_category experimental_source _Entity_experimental_src_list.Sf_framecode experimental_source _Entity_experimental_src_list.Entry_ID bmse011715 _Entity_experimental_src_list.ID 1 loop_ _Entity_experimental_src.ID _Entity_experimental_src.Entity_ID _Entity_experimental_src.Entity_label _Entity_experimental_src.Production_method _Entity_experimental_src.Entry_ID _Entity_experimental_src.Entity_experimental_src_list_ID 1 1 $entity_1 'chemical synthesis' bmse011715 1 stop_ save_ ################################# # Polymer residues and ligands # ################################# save_chem_comp_1 _Chem_comp.Sf_category chem_comp _Chem_comp.Sf_framecode chem_comp_1 _Chem_comp.Entry_ID bmse011715 _Chem_comp.ID Z2856434940 _Chem_comp.Provenance iNEXT _Chem_comp.Name N-[(4-methoxyphenyl)methyl]cyclopentanamine _Chem_comp.Type non-polymer _Chem_comp.Number_atoms_all 34 _Chem_comp.Number_atoms_nh 15 _Chem_comp.InChI_code InChI=1S/C13H19NO/c1-15-13-8-6-11(7-9-13)10-14-12-4-2-3-5-12/h6-9,12,14H,2-5,10H2,1H3 _Chem_comp.Synonyms P8_C06 _Chem_comp.Formal_charge 0 _Chem_comp.Paramagnetic no _Chem_comp.Formula C13H19NO _Chem_comp.Formula_weight 205.2960599999998 _Chem_comp.Formula_mono_iso_wt_nat 205.146664233 _Chem_comp.Formula_mono_iso_wt_13C 218.19027712700006 _Chem_comp.Formula_mono_iso_wt_15N 206.143699126 _Chem_comp.Formula_mono_iso_wt_13C_15N 219.18731202000006 _Chem_comp.Image_file_name bmse011715.png _Chem_comp.Image_file_format png _Chem_comp.Struct_file_name bmse011715.sdf _Chem_comp.Struct_file_format sdf loop_ _Chem_comp_descriptor.Descriptor _Chem_comp_descriptor.Type _Chem_comp_descriptor.Program _Chem_comp_descriptor.Program_version _Chem_comp_descriptor.Entry_ID _Chem_comp_descriptor.Comp_ID O(C1=CC=C(C=C1)CNC2CCCC2)C SMILES Bruker_TopSpin_FBS na bmse011715 Z2856434940 COc1ccc(CNC2CCCC2)cc1 SMILES_CANONICAL RDKit 2017.09.3 bmse011715 Z2856434940 COc1ccc(CNC2CCCC2)cc1 SMILES_ISOMERIC RDKit 2017.09.3 bmse011715 Z2856434940 COc1ccc(CNC2CCCC2)cc1 SMILES RDKit 2017.09.3 bmse011715 Z2856434940 COc1ccc(cc1)CNC1CCCC1 SMILES_CANONICAL OpenBabel 2.3.2 bmse011715 Z2856434940 COc1ccc(cc1)CNC1CCCC1 SMILES OpenBabel 2.3.2 bmse011715 Z2856434940 InChI=1S/C13H19NO/c1-15-13-8-6-11(7-9-13)10-14-12-4-2-3-5-12/h6-9,12,14H,2-5,10H2,1H3 InChI OpenBabel 2.3.2 bmse011715 Z2856434940 LVSGBNFVCJKBJD-UHFFFAOYSA-N InChI_KEY OpenBabel 2.3.2 bmse011715 Z2856434940 InChI=1S/C13H19NO/c1-15-13-8-6-11(7-9-13)10-14-12-4-2-3-5-12/h6-9,12,14H,2-5,10H2,1H3 InChI ALATIS na bmse011715 Z2856434940 stop_ loop_ _Chem_comp_identifier.Identifier _Chem_comp_identifier.Type _Chem_comp_identifier.Program _Chem_comp_identifier.Program_version _Chem_comp_identifier.Entry_ID _Chem_comp_identifier.Comp_ID N-[(4-methoxyphenyl)methyl]cyclopentanamine 'IUPAC NAME' http://cactus.nci.nih.gov/chemical/structure na bmse011715 Z2856434940 stop_ loop_ _Chem_comp_atom.Atom_ID _Chem_comp_atom.Type_symbol _Chem_comp_atom.Stereo_config _Chem_comp_atom.Charge _Chem_comp_atom.Aromatic_flag _Chem_comp_atom.PDBX_ordinal _Chem_comp_atom.Entry_ID _Chem_comp_atom.Comp_ID C1 C N 0 no 1 bmse011715 Z2856434940 C2 C N 0 no 2 bmse011715 Z2856434940 C3 C N 0 no 3 bmse011715 Z2856434940 C4 C N 0 no 4 bmse011715 Z2856434940 C5 C N 0 no 5 bmse011715 Z2856434940 C6 C N 0 yes 6 bmse011715 Z2856434940 C7 C N 0 yes 7 bmse011715 Z2856434940 C8 C N 0 yes 8 bmse011715 Z2856434940 C9 C N 0 yes 9 bmse011715 Z2856434940 C10 C N 0 no 10 bmse011715 Z2856434940 C11 C N 0 yes 11 bmse011715 Z2856434940 C12 C N 0 no 12 bmse011715 Z2856434940 C13 C N 0 yes 13 bmse011715 Z2856434940 N14 N N 0 no 14 bmse011715 Z2856434940 O15 O N 0 no 15 bmse011715 Z2856434940 H16 H N 0 no 16 bmse011715 Z2856434940 H17 H N 0 no 17 bmse011715 Z2856434940 H18 H N 0 no 18 bmse011715 Z2856434940 H19 H N 0 no 19 bmse011715 Z2856434940 H20 H N 0 no 20 bmse011715 Z2856434940 H21 H N 0 no 21 bmse011715 Z2856434940 H22 H N 0 no 22 bmse011715 Z2856434940 H23 H N 0 no 23 bmse011715 Z2856434940 H24 H N 0 no 24 bmse011715 Z2856434940 H25 H N 0 no 25 bmse011715 Z2856434940 H26 H N 0 no 26 bmse011715 Z2856434940 H27 H N 0 no 27 bmse011715 Z2856434940 H28 H N 0 no 28 bmse011715 Z2856434940 H29 H N 0 no 29 bmse011715 Z2856434940 H30 H N 0 no 30 bmse011715 Z2856434940 H31 H N 0 no 31 bmse011715 Z2856434940 H32 H N 0 no 32 bmse011715 Z2856434940 H33 H N 0 no 33 bmse011715 Z2856434940 H34 H N 0 no 34 bmse011715 Z2856434940 stop_ loop_ _Atom_nomenclature.Naming_system _Atom_nomenclature.Atom_name _Atom_nomenclature.Atom_ID _Atom_nomenclature.Entry_ID _Atom_nomenclature.Comp_ID author C11 C1 bmse011715 Z2856434940 author C14 C2 bmse011715 Z2856434940 author C15 C3 bmse011715 Z2856434940 author C13 C4 bmse011715 Z2856434940 author C12 C5 bmse011715 Z2856434940 author C5 C6 bmse011715 Z2856434940 author C6 C7 bmse011715 Z2856434940 author C7 C8 bmse011715 Z2856434940 author C8 C9 bmse011715 Z2856434940 author C2 C10 bmse011715 Z2856434940 author C3 C11 bmse011715 Z2856434940 author C9 C12 bmse011715 Z2856434940 author C4 C13 bmse011715 Z2856434940 author N1 N14 bmse011715 Z2856434940 author O10 O15 bmse011715 Z2856434940 author H25 H16 bmse011715 Z2856434940 author H26 H17 bmse011715 Z2856434940 author H24 H18 bmse011715 Z2856434940 author H31 H19 bmse011715 Z2856434940 author H32 H20 bmse011715 Z2856434940 author H33 H21 bmse011715 Z2856434940 author H34 H22 bmse011715 Z2856434940 author H29 H23 bmse011715 Z2856434940 author H30 H24 bmse011715 Z2856434940 author H27 H25 bmse011715 Z2856434940 author H28 H26 bmse011715 Z2856434940 author H19 H27 bmse011715 Z2856434940 author H20 H28 bmse011715 Z2856434940 author H21 H29 bmse011715 Z2856434940 author H22 H30 bmse011715 Z2856434940 author H17 H31 bmse011715 Z2856434940 author H18 H32 bmse011715 Z2856434940 author H23 H33 bmse011715 Z2856434940 author H16 H34 bmse011715 Z2856434940 ALATIS C1 C1 bmse011715 Z2856434940 ALATIS C2 C2 bmse011715 Z2856434940 ALATIS C3 C3 bmse011715 Z2856434940 ALATIS C4 C4 bmse011715 Z2856434940 ALATIS C5 C5 bmse011715 Z2856434940 ALATIS C6 C6 bmse011715 Z2856434940 ALATIS C7 C7 bmse011715 Z2856434940 ALATIS C8 C8 bmse011715 Z2856434940 ALATIS C9 C9 bmse011715 Z2856434940 ALATIS C10 C10 bmse011715 Z2856434940 ALATIS C11 C11 bmse011715 Z2856434940 ALATIS C12 C12 bmse011715 Z2856434940 ALATIS C13 C13 bmse011715 Z2856434940 ALATIS N14 N14 bmse011715 Z2856434940 ALATIS O15 O15 bmse011715 Z2856434940 ALATIS H16 H16 bmse011715 Z2856434940 ALATIS H17 H17 bmse011715 Z2856434940 ALATIS H18 H18 bmse011715 Z2856434940 ALATIS H19 H19 bmse011715 Z2856434940 ALATIS H20 H20 bmse011715 Z2856434940 ALATIS H21 H21 bmse011715 Z2856434940 ALATIS H22 H22 bmse011715 Z2856434940 ALATIS H23 H23 bmse011715 Z2856434940 ALATIS H24 H24 bmse011715 Z2856434940 ALATIS H25 H25 bmse011715 Z2856434940 ALATIS H26 H26 bmse011715 Z2856434940 ALATIS H27 H27 bmse011715 Z2856434940 ALATIS H28 H28 bmse011715 Z2856434940 ALATIS H29 H29 bmse011715 Z2856434940 ALATIS H30 H30 bmse011715 Z2856434940 ALATIS H31 H31 bmse011715 Z2856434940 ALATIS H32 H32 bmse011715 Z2856434940 ALATIS H33 H33 bmse011715 Z2856434940 ALATIS H34 H34 bmse011715 Z2856434940 stop_ loop_ _Chem_comp_bond.ID _Chem_comp_bond.Type _Chem_comp_bond.Value_order _Chem_comp_bond.Atom_ID_1 _Chem_comp_bond.Atom_ID_2 _Chem_comp_bond.Aromatic_flag _Chem_comp_bond.Stereo_config _Chem_comp_bond.Ordinal _Chem_comp_bond.Entry_ID _Chem_comp_bond.Comp_ID 1 covalent AROM C6 C11 yes N 1 bmse011715 Z2856434940 2 covalent AROM C7 C11 yes N 2 bmse011715 Z2856434940 3 covalent AROM C8 C6 yes N 3 bmse011715 Z2856434940 4 covalent AROM C8 C13 yes N 4 bmse011715 Z2856434940 5 covalent AROM C9 C7 yes N 5 bmse011715 Z2856434940 6 covalent AROM C13 C9 yes N 6 bmse011715 Z2856434940 7 covalent SING C1 O15 no N 7 bmse011715 Z2856434940 8 covalent SING C1 H16 no N 8 bmse011715 Z2856434940 9 covalent SING C1 H17 no N 9 bmse011715 Z2856434940 10 covalent SING C1 H18 no N 10 bmse011715 Z2856434940 11 covalent SING C2 C3 no N 11 bmse011715 Z2856434940 12 covalent SING C2 C4 no N 12 bmse011715 Z2856434940 13 covalent SING C2 H19 no N 13 bmse011715 Z2856434940 14 covalent SING C2 H20 no N 14 bmse011715 Z2856434940 15 covalent SING C3 C5 no N 15 bmse011715 Z2856434940 16 covalent SING C3 H21 no N 16 bmse011715 Z2856434940 17 covalent SING C3 H22 no N 17 bmse011715 Z2856434940 18 covalent SING C4 C12 no N 18 bmse011715 Z2856434940 19 covalent SING C4 H23 no N 19 bmse011715 Z2856434940 20 covalent SING C4 H24 no N 20 bmse011715 Z2856434940 21 covalent SING C5 C12 no N 21 bmse011715 Z2856434940 22 covalent SING C5 H25 no N 22 bmse011715 Z2856434940 23 covalent SING C5 H26 no N 23 bmse011715 Z2856434940 24 covalent SING C6 H27 no N 24 bmse011715 Z2856434940 25 covalent SING C7 H28 no N 25 bmse011715 Z2856434940 26 covalent SING C8 H29 no N 26 bmse011715 Z2856434940 27 covalent SING C9 H30 no N 27 bmse011715 Z2856434940 28 covalent SING C10 N14 no N 28 bmse011715 Z2856434940 29 covalent SING C10 H31 no N 29 bmse011715 Z2856434940 30 covalent SING C10 H32 no N 30 bmse011715 Z2856434940 31 covalent SING C11 C10 no N 31 bmse011715 Z2856434940 32 covalent SING C12 N14 no N 32 bmse011715 Z2856434940 33 covalent SING C12 H33 no N 33 bmse011715 Z2856434940 34 covalent SING N14 H34 no N 34 bmse011715 Z2856434940 35 covalent SING O15 C13 no N 35 bmse011715 Z2856434940 stop_ save_ ##################################### # Sample contents and methodology # ##################################### ######################## # Sample description # ######################## save_sample_1 _Sample.Sf_category sample _Sample.Sf_framecode sample_1 _Sample.Entry_ID bmse011715 _Sample.ID 1 _Sample.Type solution loop_ _Sample_component.ID _Sample_component.Mol_common_name _Sample_component.Isotopic_labeling _Sample_component.Assembly_ID _Sample_component.Assembly_label _Sample_component.Entity_ID _Sample_component.Entity_label _Sample_component.Type _Sample_component.Concentration_val _Sample_component.Concentration_val_units _Sample_component.Entry_ID _Sample_component.Sample_ID 1 Z2856434940 'natural abundance' 1 $assembly_1 1 $entity_1 solute 1 mM bmse011715 1 2 'Potassium phosphate' 'natural abundance' . . . . buffer 25 mM bmse011715 1 3 'Potassium chloride' 'natural abundance' . . . . salt 50 mM bmse011715 1 4 'Magnesium chloride' 'natural abundance' . . . . salt 5 mM bmse011715 1 5 D2O 'natural abundance' . . . . solvent 9 % bmse011715 1 6 H2O 'natural abundance' . . . . solvent 90 % bmse011715 1 7 DMSO '[2H U-100%]' . . . . solvent 1 % bmse011715 1 stop_ save_ ####################### # Sample conditions # ####################### save_sample_conditions_1 _Sample_condition_list.Sf_category sample_conditions _Sample_condition_list.Sf_framecode sample_conditions_1 _Sample_condition_list.Entry_ID bmse011715 _Sample_condition_list.ID 1 loop_ _Sample_condition_variable.Type _Sample_condition_variable.Val _Sample_condition_variable.Val_err _Sample_condition_variable.Val_units _Sample_condition_variable.Entry_ID _Sample_condition_variable.Sample_condition_list_ID pH 6.0 ? pH bmse011715 1 pressure 1 . atm bmse011715 1 temperature 298 0.1 K bmse011715 1 stop_ save_ ############################ # Computer software used # ############################ save_software_topspin _Software.Sf_category software _Software.Sf_framecode software_topspin _Software.Entry_ID bmse011715 _Software.ID 1 _Software.Name TopSpin _Software.Version 4.0.3 loop_ _Vendor.Name _Vendor.Electronic_address _Vendor.Entry_ID _Vendor.Software_ID 'Bruker Biospin' http://www.bruker.com/products/mr/nmr/nmr-software/software/topspin/ bmse011715 1 stop_ loop_ _Task.Task _Task.Entry_ID _Task.Software_ID 'data analysis' bmse011715 1 'peak picking' bmse011715 1 processing bmse011715 1 stop_ save_ ######################### # Experimental detail # ######################### ################################## # NMR Spectrometer definitions # ################################## save_spectrometer_Bruker _NMR_spectrometer.Sf_category NMR_spectrometer _NMR_spectrometer.Sf_framecode spectrometer_Bruker _NMR_spectrometer.Entry_ID bmse011715 _NMR_spectrometer.ID 1 _NMR_spectrometer.Manufacturer Bruker _NMR_spectrometer.Model Avance _NMR_spectrometer.Field_strength 600 save_ ############################# # NMR applied experiments # ############################# save_experiment_list _Experiment_list.Sf_category experiment_list _Experiment_list.Sf_framecode experiment_list _Experiment_list.Entry_ID bmse011715 _Experiment_list.ID 1 loop_ _Experiment.ID _Experiment.Name _Experiment.Raw_data_flag _Experiment.Sample_ID _Experiment.Sample_label _Experiment.Sample_state _Experiment.Sample_condition_list_ID _Experiment.Sample_condition_list_label _Experiment.NMR_spectrometer_ID _Experiment.NMR_spectrometer_label _Experiment.Entry_ID _Experiment.Experiment_list_ID 1 '1D 1H' yes 1 $sample_1 isotropic 1 $sample_conditions_1 1 $spectrometer_Bruker bmse011715 1 stop_ loop_ _Experiment_file.Experiment_ID _Experiment_file.Name _Experiment_file.Type _Experiment_file.Content _Experiment_file.Directory_path _Experiment_file.Entry_ID _Experiment_file.Experiment_list_ID 1 1 text/directory 'NMR experiment directory' nmr/set01/ bmse011715 1 1 cmcproject.xml text/xml 'spectrum analysis' nmr/set01/1/pdata/1/ bmse011715 1 1 multiplet.txt text 'Peak list' nmr/set01/1/pdata/1/ bmse011715 1 1 spectrum_overview.pdf pdf 'Spectrum image' nmr/set01/1/pdata/1/ bmse011715 1 1 spectrum_overview.png image/png 'Spectral image' nmr/set01/1/pdata/1/ bmse011715 1 stop_ save_ #################### # NMR parameters # #################### ############################## # Assigned chemical shifts # ############################## ################################ # Chemical shift referencing # ################################ save_chem_shift_ref_set _Chem_shift_reference.Sf_category chem_shift_reference _Chem_shift_reference.Sf_framecode chem_shift_ref_set _Chem_shift_reference.Entry_ID bmse011715 _Chem_shift_reference.ID 1 loop_ _Chem_shift_ref.Atom_type _Chem_shift_ref.Atom_isotope_number _Chem_shift_ref.Mol_common_name _Chem_shift_ref.Atom_group _Chem_shift_ref.Chem_shift_units _Chem_shift_ref.Chem_shift_val _Chem_shift_ref.Ref_method _Chem_shift_ref.Ref_type _Chem_shift_ref.Indirect_shift_ratio _Chem_shift_ref.Entry_ID _Chem_shift_ref.Chem_shift_reference_ID H 1 TSP 'methyl protons' ppm 0.0 internal direct 1.0 bmse011715 1 stop_ save_ ######################### # Spectral peak lists # ######################### save_spectral_peaks_1D_1H _Spectral_peak_list.Sf_category spectral_peak_list _Spectral_peak_list.Sf_framecode spectral_peaks_1D_1H _Spectral_peak_list.Entry_ID bmse011715 _Spectral_peak_list.ID 1 _Spectral_peak_list.Sample_ID 1 _Spectral_peak_list.Sample_label $sample_1 _Spectral_peak_list.Sample_condition_list_ID 1 _Spectral_peak_list.Sample_condition_list_label $sample_conditions_1 _Spectral_peak_list.Experiment_ID 1 _Spectral_peak_list.Experiment_name '1D 1H' _Spectral_peak_list.Number_of_spectral_dimensions 1 _Spectral_peak_list.Assigned_chem_shift_list_ID 1 _Spectral_peak_list.Details 'F1: 1H' loop_ _Spectral_dim.ID _Spectral_dim.Spectrometer_frequency _Spectral_dim.Atom_type _Spectral_dim.Atom_isotope_number _Spectral_dim.Spectral_region _Spectral_dim.Sweep_width _Spectral_dim.Sweep_width_units _Spectral_dim.Entry_ID _Spectral_dim.Spectral_peak_list_ID 1 600.1728185 H 1 'Full H' 12.0157698570257 ppm bmse011715 1 stop_ loop_ _Spectral_peak_software.Software_ID _Spectral_peak_software.Software_label _Spectral_peak_software.Entry_ID _Spectral_peak_software.Spectral_peak_list_ID 1 $software_topspin bmse011715 1 stop_ loop_ _Peak.ID _Peak.Entry_ID _Peak.Spectral_peak_list_ID 1 bmse011715 1 2 bmse011715 1 3 bmse011715 1 4 bmse011715 1 5 bmse011715 1 6 bmse011715 1 7 bmse011715 1 8 bmse011715 1 9 bmse011715 1 10 bmse011715 1 stop_ loop_ _Peak_char.Peak_ID _Peak_char.Spectral_dim_ID _Peak_char.Chem_shift_val _Peak_char.Details _Peak_char.Entry_ID _Peak_char.Spectral_peak_list_ID 1 1 2.6030 DMSO bmse011715 1 2 1 2.0366 12,13_m_Q1 bmse011715 1 3 1 4.6500 SUP bmse011715 1 4 1 1.6653 12,13_m bmse011715 1 5 1 1.5564 14,15_m bmse011715 1 6 1 4.0893 1_s bmse011715 1 7 1 3.5061 9_quint_Q2 bmse011715 1 8 1 6.9774 7,8_m bmse011715 1 9 1 7.3443 5,6_d_Q3 bmse011715 1 10 1 3.7717 11_s bmse011715 1 stop_ loop_ _Peak_coupling.ID _Peak_coupling.Peak_ID _Peak_coupling.Spectral_dim_ID _Peak_coupling.Coupling_val _Peak_coupling.Entry_ID _Peak_coupling.Spectral_peak_list_ID 1 1 1 1.9532 bmse011715 1 2 2 1 4.1677 bmse011715 1 3 3 1 0.0000 bmse011715 1 4 4 1 6.2172 bmse011715 1 5 5 1 5.6120 bmse011715 1 6 6 1 0.0000 bmse011715 1 7 7 1 7.3726 bmse011715 1 8 8 1 2.9711 bmse011715 1 9 9 1 8.6931 bmse011715 1 10 10 1 0.0000 bmse011715 1 stop_ loop_ _Spectral_transition.ID _Spectral_transition.Entry_ID _Spectral_transition.Spectral_peak_list_ID 1 bmse011715 1 2 bmse011715 1 3 bmse011715 1 4 bmse011715 1 5 bmse011715 1 6 bmse011715 1 7 bmse011715 1 8 bmse011715 1 9 bmse011715 1 10 bmse011715 1 11 bmse011715 1 12 bmse011715 1 13 bmse011715 1 14 bmse011715 1 15 bmse011715 1 16 bmse011715 1 17 bmse011715 1 18 bmse011715 1 19 bmse011715 1 20 bmse011715 1 21 bmse011715 1 22 bmse011715 1 23 bmse011715 1 24 bmse011715 1 25 bmse011715 1 26 bmse011715 1 27 bmse011715 1 28 bmse011715 1 29 bmse011715 1 30 bmse011715 1 31 bmse011715 1 32 bmse011715 1 33 bmse011715 1 34 bmse011715 1 35 bmse011715 1 36 bmse011715 1 37 bmse011715 1 38 bmse011715 1 39 bmse011715 1 stop_ loop_ _Spectral_transition_char.Spectral_transition_ID _Spectral_transition_char.Spectral_dim_ID _Spectral_transition_char.Chem_shift_val _Spectral_transition_char.Entry_ID _Spectral_transition_char.Spectral_peak_list_ID 1 1 2.5965 bmse011715 1 2 1 2.6000 bmse011715 1 3 1 2.6029 bmse011715 1 4 1 2.6058 bmse011715 1 5 1 2.6095 bmse011715 1 6 1 2.0644 bmse011715 1 7 1 2.0562 bmse011715 1 8 1 2.0496 bmse011715 1 9 1 2.0430 bmse011715 1 10 1 2.0332 bmse011715 1 11 1 2.0307 bmse011715 1 12 1 2.0226 bmse011715 1 13 1 2.0175 bmse011715 1 14 1 2.0089 bmse011715 1 15 1 4.6500 bmse011715 1 16 1 1.6757 bmse011715 1 17 1 1.6596 bmse011715 1 18 1 1.6550 bmse011715 1 19 1 1.5798 bmse011715 1 20 1 1.5670 bmse011715 1 21 1 1.5547 bmse011715 1 22 1 1.5508 bmse011715 1 23 1 1.5415 bmse011715 1 24 1 1.5331 bmse011715 1 25 1 4.0893 bmse011715 1 26 1 3.4815 bmse011715 1 27 1 3.4936 bmse011715 1 28 1 3.5059 bmse011715 1 29 1 3.5176 bmse011715 1 30 1 3.5306 bmse011715 1 31 1 6.9647 bmse011715 1 32 1 6.9702 bmse011715 1 33 1 6.9737 bmse011715 1 34 1 6.9809 bmse011715 1 35 1 6.9845 bmse011715 1 36 1 6.9895 bmse011715 1 37 1 7.3371 bmse011715 1 38 1 7.3516 bmse011715 1 39 1 3.7717 bmse011715 1 stop_ save_