data_bmse011066 ####################### # Entry information # ####################### save_entry_information _Entry.Sf_category entry_information _Entry.Sf_framecode entry_information _Entry.ID bmse011066 _Entry.Title ; NMR quality control of fragment libraries for screening ; _Entry.Type 'compound library' _Entry.Version_type original _Entry.Submission_date 2020-09-15 _Entry.Accession_date 2020-09-15 _Entry.Last_release_date 2020-09-15 _Entry.Original_release_date 2020-09-15 _Entry.Origination author _Entry.NMR_STAR_version 3.2.0.16 _Entry.Original_NMR_STAR_version 3.2.0.16 _Entry.Experimental_method NMR _Entry.Experimental_method_subtype solution _Entry.DOI 10.12018/bmse011066 loop_ _Entry_experimental_methods.ID _Entry_experimental_methods.Method _Entry_experimental_methods.Subtype _Entry_experimental_methods.Entry_ID 1 NMR solution bmse011066 stop_ loop_ _Entry_author.Ordinal _Entry_author.Given_name _Entry_author.Family_name _Entry_author.First_initial _Entry_author.Middle_initials _Entry_author.Entry_ID 1 Sridhar Sreeramulu S. . bmse011066 2 Christian Richter C. . bmse011066 3 Till Kuehn T. . bmse011066 4 Kamal Azzaoui K. . bmse011066 5 Marcel Blommers M. J.J. bmse011066 6 Rebecca 'Del Conte' R. . bmse011066 7 Marco Fragai M. . bmse011066 8 Nils Trieloff N. . bmse011066 9 Peter Schmieder P. . bmse011066 10 Marc Nazare M. . bmse011066 11 Edgar Specker E. . bmse011066 12 Vladimir Ivanov V. . bmse011066 13 Hartmut Oschkinat H. . bmse011066 14 Lucia Banci L. . bmse011066 15 Harald Schwalbe H. . bmse011066 stop_ loop_ _Entry_src.ID _Entry_src.Project_name _Entry_src.Organization_full_name _Entry_src.Entry_ID 1 iNEXT 'Infrastructure for NMR' bmse011066 stop_ loop_ _Data_set.Type _Data_set.Count _Data_set.Entry_ID spectral_peak_list 1 bmse011066 stop_ loop_ _Datum.Type _Datum.Count _Datum.Entry_ID '1H chemical shifts' 9 bmse011066 stop_ loop_ _Release.Release_number _Release.Format_type _Release.Format_version _Release.Date _Release.Submission_date _Release.Type _Release.Author _Release.Detail _Release.Entry_ID 1 NMR-STAR 3.2.11.4 2020-09-15 . original author . bmse011066 stop_ loop_ _Auxiliary_files.ID _Auxiliary_files.Name _Auxiliary_files.Format _Auxiliary_files.URI _Auxiliary_files.Details _Auxiliary_files.Entry_ID 3 bmse011066.sdf sdf na 'Structure Definition File' bmse011066 stop_ save_ ############### # Citations # ############### save_entry_citation _Citation.Sf_category citations _Citation.Sf_framecode entry_citation _Citation.Entry_ID bmse011066 _Citation.ID 1 _Citation.Class 'entry citation' _Citation.DOI 10.1007/s10858-020-00327-9 _Citation.Title ; NMR quality control of fragment libraries for screening ; _Citation.Status published _Citation.Type 'open access' _Citation.Journal_abbrev 'J. Biomol. NMR' _Citation.Year 2020 loop_ _Citation_author.Ordinal _Citation_author.Given_name _Citation_author.Family_name _Citation_author.First_initial _Citation_author.Middle_initials _Citation_author.Entry_ID _Citation_author.Citation_ID 1 Sridhar Sreeramulu S. . bmse011066 1 2 Christian Richter C. . bmse011066 1 3 Till Kuehn T. . bmse011066 1 4 Kamal Azzaoui K. . bmse011066 1 5 Marcel Blommers M. J.J. bmse011066 1 6 Rebecca 'Del Conte' R. . bmse011066 1 7 Marco Fragai M. . bmse011066 1 8 Nils Trieloff N. . bmse011066 1 9 Peter Schmieder P. . bmse011066 1 10 Marc Nazare M. . bmse011066 1 11 Edgar Specker E. . bmse011066 1 12 Vladimir Ivanov V. . bmse011066 1 13 Hartmut Oschkinat H. . bmse011066 1 14 Lucia Banci L. . bmse011066 1 15 Harald Schwalbe H. . bmse011066 1 stop_ save_ ############################################# # Molecular system (assembly) description # ############################################# save_assembly_1 _Assembly.Sf_category assembly _Assembly.Sf_framecode assembly_1 _Assembly.Entry_ID bmse011066 _Assembly.ID 1 _Assembly.Name 'methyl 4-(cyclopentanecarbonylamino)benzoate' _Assembly.Number_of_components 1 _Assembly.Paramagnetic no _Assembly.Thiol_state na loop_ _Entity_assembly.ID _Entity_assembly.Entity_assembly_name _Entity_assembly.Entity_ID _Entity_assembly.Entity_label _Entity_assembly.Experimental_data_reported _Entity_assembly.Physical_state _Entity_assembly.Conformational_isomer _Entity_assembly.Chemical_exchange_state _Entity_assembly.Entry_ID _Entity_assembly.Assembly_ID 1 Z28226359 1 $entity_1 yes native no no bmse011066 1 stop_ loop_ _Atom.Assembly_atom_ID _Atom.Entity_assembly_ID _Atom.Entity_ID _Atom.Comp_index_ID _Atom.Seq_ID _Atom.Comp_ID _Atom.Atom_ID _Atom.Type_symbol _Atom.Entry_ID _Atom.Assembly_ID 1 1 1 1 1 Z28226359 C1 C bmse011066 1 2 1 1 1 1 Z28226359 C2 C bmse011066 1 3 1 1 1 1 Z28226359 C3 C bmse011066 1 4 1 1 1 1 Z28226359 C4 C bmse011066 1 5 1 1 1 1 Z28226359 C5 C bmse011066 1 6 1 1 1 1 Z28226359 C6 C bmse011066 1 7 1 1 1 1 Z28226359 C7 C bmse011066 1 8 1 1 1 1 Z28226359 C8 C bmse011066 1 9 1 1 1 1 Z28226359 C9 C bmse011066 1 10 1 1 1 1 Z28226359 C10 C bmse011066 1 11 1 1 1 1 Z28226359 C11 C bmse011066 1 12 1 1 1 1 Z28226359 C12 C bmse011066 1 13 1 1 1 1 Z28226359 C13 C bmse011066 1 14 1 1 1 1 Z28226359 C14 C bmse011066 1 15 1 1 1 1 Z28226359 N15 N bmse011066 1 16 1 1 1 1 Z28226359 O16 O bmse011066 1 17 1 1 1 1 Z28226359 O17 O bmse011066 1 18 1 1 1 1 Z28226359 O18 O bmse011066 1 19 1 1 1 1 Z28226359 H19 H bmse011066 1 20 1 1 1 1 Z28226359 H20 H bmse011066 1 21 1 1 1 1 Z28226359 H21 H bmse011066 1 22 1 1 1 1 Z28226359 H22 H bmse011066 1 23 1 1 1 1 Z28226359 H23 H bmse011066 1 24 1 1 1 1 Z28226359 H24 H bmse011066 1 25 1 1 1 1 Z28226359 H25 H bmse011066 1 26 1 1 1 1 Z28226359 H26 H bmse011066 1 27 1 1 1 1 Z28226359 H27 H bmse011066 1 28 1 1 1 1 Z28226359 H28 H bmse011066 1 29 1 1 1 1 Z28226359 H29 H bmse011066 1 30 1 1 1 1 Z28226359 H30 H bmse011066 1 31 1 1 1 1 Z28226359 H31 H bmse011066 1 32 1 1 1 1 Z28226359 H32 H bmse011066 1 33 1 1 1 1 Z28226359 H33 H bmse011066 1 34 1 1 1 1 Z28226359 H34 H bmse011066 1 35 1 1 1 1 Z28226359 H35 H bmse011066 1 stop_ save_ #################################### # Biological polymers and ligands # #################################### save_entity_1 _Entity.Sf_category entity _Entity.Sf_framecode entity_1 _Entity.Entry_ID bmse011066 _Entity.ID 1 _Entity.Name 'methyl 4-(cyclopentanecarbonylamino)benzoate' _Entity.Type non-polymer _Entity.Ambiguous_conformational_states no _Entity.Ambiguous_chem_comp_sites no _Entity.Nstd_linkage no _Entity.Nonpolymer_comp_ID Z28226359 _Entity.Nonpolymer_comp_label $chem_comp_1 _Entity.Number_of_monomers 1 _Entity.Number_of_nonpolymer_components 1 _Entity.Paramagnetic no _Entity.Thiol_state 'not present' _Entity.Formula_weight 247.28967999999983 loop_ _Entity_comp_index.ID _Entity_comp_index.Auth_seq_ID _Entity_comp_index.Comp_ID _Entity_comp_index.Comp_label _Entity_comp_index.Entry_ID _Entity_comp_index.Entity_ID 1 1 Z28226359 $chem_comp_1 bmse011066 1 stop_ save_ #################### # Natural source # #################### save_natural_source _Entity_natural_src_list.Sf_category natural_source _Entity_natural_src_list.Sf_framecode natural_source _Entity_natural_src_list.Entry_ID bmse011066 _Entity_natural_src_list.ID 1 loop_ _Entity_natural_src.ID _Entity_natural_src.Entity_ID _Entity_natural_src.Entity_label _Entity_natural_src.NCBI_taxonomy_ID _Entity_natural_src.Type _Entity_natural_src.Common _Entity_natural_src.Organism_name_scientific _Entity_natural_src.Organism_name_common _Entity_natural_src.Superkingdom _Entity_natural_src.Genus _Entity_natural_src.Species _Entity_natural_src.Entry_ID _Entity_natural_src.Entity_natural_src_list_ID 1 1 $entity_1 na na yes na na na na na bmse011066 1 stop_ save_ ######################### # Experimental source # ######################### save_experimental_source _Entity_experimental_src_list.Sf_category experimental_source _Entity_experimental_src_list.Sf_framecode experimental_source _Entity_experimental_src_list.Entry_ID bmse011066 _Entity_experimental_src_list.ID 1 loop_ _Entity_experimental_src.ID _Entity_experimental_src.Entity_ID _Entity_experimental_src.Entity_label _Entity_experimental_src.Production_method _Entity_experimental_src.Entry_ID _Entity_experimental_src.Entity_experimental_src_list_ID 1 1 $entity_1 'chemical synthesis' bmse011066 1 stop_ save_ ################################# # Polymer residues and ligands # ################################# save_chem_comp_1 _Chem_comp.Sf_category chem_comp _Chem_comp.Sf_framecode chem_comp_1 _Chem_comp.Entry_ID bmse011066 _Chem_comp.ID Z28226359 _Chem_comp.Provenance iNEXT _Chem_comp.Name 'methyl 4-(cyclopentanecarbonylamino)benzoate' _Chem_comp.Type non-polymer _Chem_comp.Number_atoms_all 35 _Chem_comp.Number_atoms_nh 18 _Chem_comp.InChI_code InChI=1S/C14H17NO3/c1-18-14(17)11-6-8-12(9-7-11)15-13(16)10-4-2-3-5-10/h6-10H,2-5H2,1H3,(H,15,16) _Chem_comp.Synonyms P1_B09 _Chem_comp.Formal_charge 0 _Chem_comp.Paramagnetic no _Chem_comp.Formula C14H17NO3 _Chem_comp.Formula_weight 247.28967999999983 _Chem_comp.Formula_mono_iso_wt_nat 247.120843409 _Chem_comp.Formula_mono_iso_wt_13C 261.16781114100024 _Chem_comp.Formula_mono_iso_wt_15N 248.117878302 _Chem_comp.Formula_mono_iso_wt_13C_15N 262.1648460340003 _Chem_comp.Image_file_name bmse011066.png _Chem_comp.Image_file_format png _Chem_comp.Struct_file_name bmse011066.sdf _Chem_comp.Struct_file_format sdf loop_ _Chem_comp_descriptor.Descriptor _Chem_comp_descriptor.Type _Chem_comp_descriptor.Program _Chem_comp_descriptor.Program_version _Chem_comp_descriptor.Entry_ID _Chem_comp_descriptor.Comp_ID O=C(OC)C1=CC=C(C=C1)NC(=O)C2CCCC2 SMILES Bruker_TopSpin_FBS na bmse011066 Z28226359 COC(=O)c1ccc(NC(=O)C2CCCC2)cc1 SMILES_CANONICAL RDKit 2017.09.3 bmse011066 Z28226359 COC(=O)c1ccc(NC(=O)C2CCCC2)cc1 SMILES_ISOMERIC RDKit 2017.09.3 bmse011066 Z28226359 COC(=O)c1ccc(NC(=O)C2CCCC2)cc1 SMILES RDKit 2017.09.3 bmse011066 Z28226359 COC(=O)c1ccc(cc1)NC(=O)C1CCCC1 SMILES_CANONICAL OpenBabel 2.3.2 bmse011066 Z28226359 COC(=O)c1ccc(cc1)NC(=O)C1CCCC1 SMILES OpenBabel 2.3.2 bmse011066 Z28226359 InChI=1S/C14H17NO3/c1-18-14(17)11-6-8-12(9-7-11)15-13(16)10-4-2-3-5-10/h6-10H,2-5H2,1H3,(H,15,16) InChI OpenBabel 2.3.2 bmse011066 Z28226359 QNVSMYADANMURK-UHFFFAOYSA-N InChI_KEY OpenBabel 2.3.2 bmse011066 Z28226359 InChI=1S/C14H17NO3/c1-18-14(17)11-6-8-12(9-7-11)15-13(16)10-4-2-3-5-10/h6-10H,2-5H2,1H3,(H,15,16) InChI ALATIS na bmse011066 Z28226359 stop_ loop_ _Chem_comp_identifier.Identifier _Chem_comp_identifier.Type _Chem_comp_identifier.Program _Chem_comp_identifier.Program_version _Chem_comp_identifier.Entry_ID _Chem_comp_identifier.Comp_ID 'methyl 4-(cyclopentanecarbonylamino)benzoate' 'IUPAC NAME' http://cactus.nci.nih.gov/chemical/structure na bmse011066 Z28226359 stop_ loop_ _Chem_comp_atom.Atom_ID _Chem_comp_atom.Type_symbol _Chem_comp_atom.Stereo_config _Chem_comp_atom.Charge _Chem_comp_atom.Aromatic_flag _Chem_comp_atom.PDBX_ordinal _Chem_comp_atom.Entry_ID _Chem_comp_atom.Comp_ID C1 C N 0 no 1 bmse011066 Z28226359 C2 C N 0 no 2 bmse011066 Z28226359 C3 C N 0 no 3 bmse011066 Z28226359 C4 C N 0 no 4 bmse011066 Z28226359 C5 C N 0 no 5 bmse011066 Z28226359 C6 C N 0 yes 6 bmse011066 Z28226359 C7 C N 0 yes 7 bmse011066 Z28226359 C8 C N 0 yes 8 bmse011066 Z28226359 C9 C N 0 yes 9 bmse011066 Z28226359 C10 C N 0 no 10 bmse011066 Z28226359 C11 C N 0 yes 11 bmse011066 Z28226359 C12 C N 0 yes 12 bmse011066 Z28226359 C13 C N 0 no 13 bmse011066 Z28226359 C14 C N 0 no 14 bmse011066 Z28226359 N15 N N 0 no 15 bmse011066 Z28226359 O16 O N 0 no 16 bmse011066 Z28226359 O17 O N 0 no 17 bmse011066 Z28226359 O18 O N 0 no 18 bmse011066 Z28226359 H19 H N 0 no 19 bmse011066 Z28226359 H20 H N 0 no 20 bmse011066 Z28226359 H21 H N 0 no 21 bmse011066 Z28226359 H22 H N 0 no 22 bmse011066 Z28226359 H23 H N 0 no 23 bmse011066 Z28226359 H24 H N 0 no 24 bmse011066 Z28226359 H25 H N 0 no 25 bmse011066 Z28226359 H26 H N 0 no 26 bmse011066 Z28226359 H27 H N 0 no 27 bmse011066 Z28226359 H28 H N 0 no 28 bmse011066 Z28226359 H29 H N 0 no 29 bmse011066 Z28226359 H30 H N 0 no 30 bmse011066 Z28226359 H31 H N 0 no 31 bmse011066 Z28226359 H32 H N 0 no 32 bmse011066 Z28226359 H33 H N 0 no 33 bmse011066 Z28226359 H34 H N 0 no 34 bmse011066 Z28226359 H35 H N 0 no 35 bmse011066 Z28226359 stop_ loop_ _Atom_nomenclature.Naming_system _Atom_nomenclature.Atom_name _Atom_nomenclature.Atom_ID _Atom_nomenclature.Entry_ID _Atom_nomenclature.Comp_ID author C16 C1 bmse011066 Z28226359 author C17 C2 bmse011066 Z28226359 author C18 C3 bmse011066 Z28226359 author C15 C4 bmse011066 Z28226359 author C14 C5 bmse011066 Z28226359 author C9 C6 bmse011066 Z28226359 author C10 C7 bmse011066 Z28226359 author C13 C8 bmse011066 Z28226359 author C12 C9 bmse011066 Z28226359 author C7 C10 bmse011066 Z28226359 author C4 C11 bmse011066 Z28226359 author C8 C12 bmse011066 Z28226359 author C1 C13 bmse011066 Z28226359 author C3 C14 bmse011066 Z28226359 author N2 N15 bmse011066 Z28226359 author O5 O16 bmse011066 Z28226359 author O6 O17 bmse011066 Z28226359 author O11 O18 bmse011066 Z28226359 author H30 H19 bmse011066 Z28226359 author H31 H20 bmse011066 Z28226359 author H29 H21 bmse011066 Z28226359 author H32 H22 bmse011066 Z28226359 author H33 H23 bmse011066 Z28226359 author H34 H24 bmse011066 Z28226359 author H35 H25 bmse011066 Z28226359 author H27 H26 bmse011066 Z28226359 author H28 H27 bmse011066 Z28226359 author H25 H28 bmse011066 Z28226359 author H26 H29 bmse011066 Z28226359 author H21 H30 bmse011066 Z28226359 author H22 H31 bmse011066 Z28226359 author H24 H32 bmse011066 Z28226359 author H23 H33 bmse011066 Z28226359 author H20 H34 bmse011066 Z28226359 author H19 H35 bmse011066 Z28226359 ALATIS C1 C1 bmse011066 Z28226359 ALATIS C2 C2 bmse011066 Z28226359 ALATIS C3 C3 bmse011066 Z28226359 ALATIS C4 C4 bmse011066 Z28226359 ALATIS C5 C5 bmse011066 Z28226359 ALATIS C6 C6 bmse011066 Z28226359 ALATIS C7 C7 bmse011066 Z28226359 ALATIS C8 C8 bmse011066 Z28226359 ALATIS C9 C9 bmse011066 Z28226359 ALATIS C10 C10 bmse011066 Z28226359 ALATIS C11 C11 bmse011066 Z28226359 ALATIS C12 C12 bmse011066 Z28226359 ALATIS C13 C13 bmse011066 Z28226359 ALATIS C14 C14 bmse011066 Z28226359 ALATIS N15 N15 bmse011066 Z28226359 ALATIS O16 O16 bmse011066 Z28226359 ALATIS O17 O17 bmse011066 Z28226359 ALATIS O18 O18 bmse011066 Z28226359 ALATIS H19 H19 bmse011066 Z28226359 ALATIS H20 H20 bmse011066 Z28226359 ALATIS H21 H21 bmse011066 Z28226359 ALATIS H22 H22 bmse011066 Z28226359 ALATIS H23 H23 bmse011066 Z28226359 ALATIS H24 H24 bmse011066 Z28226359 ALATIS H25 H25 bmse011066 Z28226359 ALATIS H26 H26 bmse011066 Z28226359 ALATIS H27 H27 bmse011066 Z28226359 ALATIS H28 H28 bmse011066 Z28226359 ALATIS H29 H29 bmse011066 Z28226359 ALATIS H30 H30 bmse011066 Z28226359 ALATIS H31 H31 bmse011066 Z28226359 ALATIS H32 H32 bmse011066 Z28226359 ALATIS H33 H33 bmse011066 Z28226359 ALATIS H34 H34 bmse011066 Z28226359 ALATIS H35 H35 bmse011066 Z28226359 stop_ loop_ _Chem_comp_bond.ID _Chem_comp_bond.Type _Chem_comp_bond.Value_order _Chem_comp_bond.Atom_ID_1 _Chem_comp_bond.Atom_ID_2 _Chem_comp_bond.Aromatic_flag _Chem_comp_bond.Stereo_config _Chem_comp_bond.Ordinal _Chem_comp_bond.Entry_ID _Chem_comp_bond.Comp_ID 1 covalent AROM C6 C8 yes N 1 bmse011066 Z28226359 2 covalent AROM C6 C11 yes N 2 bmse011066 Z28226359 3 covalent AROM C7 C9 yes N 3 bmse011066 Z28226359 4 covalent AROM C8 C12 yes N 4 bmse011066 Z28226359 5 covalent AROM C9 C12 yes N 5 bmse011066 Z28226359 6 covalent AROM C11 C7 yes N 6 bmse011066 Z28226359 7 carbonyl DOUB O16 C13 no N 7 bmse011066 Z28226359 8 carbonyl DOUB O17 C14 no N 8 bmse011066 Z28226359 9 covalent SING C1 O18 no N 9 bmse011066 Z28226359 10 covalent SING C1 H19 no N 10 bmse011066 Z28226359 11 covalent SING C1 H20 no N 11 bmse011066 Z28226359 12 covalent SING C1 H21 no N 12 bmse011066 Z28226359 13 covalent SING C2 C3 no N 13 bmse011066 Z28226359 14 covalent SING C2 C4 no N 14 bmse011066 Z28226359 15 covalent SING C2 H22 no N 15 bmse011066 Z28226359 16 covalent SING C2 H23 no N 16 bmse011066 Z28226359 17 covalent SING C3 C5 no N 17 bmse011066 Z28226359 18 covalent SING C3 H24 no N 18 bmse011066 Z28226359 19 covalent SING C3 H25 no N 19 bmse011066 Z28226359 20 covalent SING C4 C10 no N 20 bmse011066 Z28226359 21 covalent SING C4 H26 no N 21 bmse011066 Z28226359 22 covalent SING C4 H27 no N 22 bmse011066 Z28226359 23 covalent SING C5 C10 no N 23 bmse011066 Z28226359 24 covalent SING C5 H28 no N 24 bmse011066 Z28226359 25 covalent SING C5 H29 no N 25 bmse011066 Z28226359 26 covalent SING C6 H30 no N 26 bmse011066 Z28226359 27 covalent SING C7 H31 no N 27 bmse011066 Z28226359 28 covalent SING C8 H32 no N 28 bmse011066 Z28226359 29 covalent SING C9 H33 no N 29 bmse011066 Z28226359 30 covalent SING C10 C13 no N 30 bmse011066 Z28226359 31 covalent SING C10 H34 no N 31 bmse011066 Z28226359 32 covalent SING C12 N15 no N 32 bmse011066 Z28226359 33 covalent SING C14 C11 no N 33 bmse011066 Z28226359 34 amide SING N15 C13 no N 34 bmse011066 Z28226359 35 covalent SING N15 H35 no N 35 bmse011066 Z28226359 36 ester SING O18 C14 no N 36 bmse011066 Z28226359 stop_ save_ ##################################### # Sample contents and methodology # ##################################### ######################## # Sample description # ######################## save_sample_1 _Sample.Sf_category sample _Sample.Sf_framecode sample_1 _Sample.Entry_ID bmse011066 _Sample.ID 1 _Sample.Type solution loop_ _Sample_component.ID _Sample_component.Mol_common_name _Sample_component.Isotopic_labeling _Sample_component.Assembly_ID _Sample_component.Assembly_label _Sample_component.Entity_ID _Sample_component.Entity_label _Sample_component.Type _Sample_component.Concentration_val _Sample_component.Concentration_val_units _Sample_component.Entry_ID _Sample_component.Sample_ID 1 Z28226359 'natural abundance' 1 $assembly_1 1 $entity_1 solute 1 mM bmse011066 1 2 'Potassium phosphate' 'natural abundance' . . . . buffer 25 mM bmse011066 1 3 'Potassium chloride' 'natural abundance' . . . . salt 50 mM bmse011066 1 4 'Magnesium chloride' 'natural abundance' . . . . salt 5 mM bmse011066 1 5 D2O 'natural abundance' . . . . solvent 9 % bmse011066 1 6 H2O 'natural abundance' . . . . solvent 90 % bmse011066 1 7 DMSO '[2H U-100%]' . . . . solvent 1 % bmse011066 1 stop_ save_ ####################### # Sample conditions # ####################### save_sample_conditions_1 _Sample_condition_list.Sf_category sample_conditions _Sample_condition_list.Sf_framecode sample_conditions_1 _Sample_condition_list.Entry_ID bmse011066 _Sample_condition_list.ID 1 loop_ _Sample_condition_variable.Type _Sample_condition_variable.Val _Sample_condition_variable.Val_err _Sample_condition_variable.Val_units _Sample_condition_variable.Entry_ID _Sample_condition_variable.Sample_condition_list_ID pH 6.0 ? pH bmse011066 1 pressure 1 . atm bmse011066 1 temperature 298 0.1 K bmse011066 1 stop_ save_ ############################ # Computer software used # ############################ save_software_topspin _Software.Sf_category software _Software.Sf_framecode software_topspin _Software.Entry_ID bmse011066 _Software.ID 1 _Software.Name TopSpin _Software.Version 4.0.3 loop_ _Vendor.Name _Vendor.Electronic_address _Vendor.Entry_ID _Vendor.Software_ID 'Bruker Biospin' http://www.bruker.com/products/mr/nmr/nmr-software/software/topspin/ bmse011066 1 stop_ loop_ _Task.Task _Task.Entry_ID _Task.Software_ID 'data analysis' bmse011066 1 'peak picking' bmse011066 1 processing bmse011066 1 stop_ save_ ######################### # Experimental detail # ######################### ################################## # NMR Spectrometer definitions # ################################## save_spectrometer_Bruker _NMR_spectrometer.Sf_category NMR_spectrometer _NMR_spectrometer.Sf_framecode spectrometer_Bruker _NMR_spectrometer.Entry_ID bmse011066 _NMR_spectrometer.ID 1 _NMR_spectrometer.Manufacturer Bruker _NMR_spectrometer.Model Avance _NMR_spectrometer.Field_strength 600 save_ ############################# # NMR applied experiments # ############################# save_experiment_list _Experiment_list.Sf_category experiment_list _Experiment_list.Sf_framecode experiment_list _Experiment_list.Entry_ID bmse011066 _Experiment_list.ID 1 loop_ _Experiment.ID _Experiment.Name _Experiment.Raw_data_flag _Experiment.Sample_ID _Experiment.Sample_label _Experiment.Sample_state _Experiment.Sample_condition_list_ID _Experiment.Sample_condition_list_label _Experiment.NMR_spectrometer_ID _Experiment.NMR_spectrometer_label _Experiment.Entry_ID _Experiment.Experiment_list_ID 1 '1D 1H' yes 1 $sample_1 isotropic 1 $sample_conditions_1 1 $spectrometer_Bruker bmse011066 1 stop_ loop_ _Experiment_file.Experiment_ID _Experiment_file.Name _Experiment_file.Type _Experiment_file.Content _Experiment_file.Directory_path _Experiment_file.Entry_ID _Experiment_file.Experiment_list_ID 1 1 text/directory 'NMR experiment directory' nmr/set01/ bmse011066 1 1 cmcproject.xml text/xml 'spectrum analysis' nmr/set01/1/pdata/1/ bmse011066 1 1 multiplet.txt text 'Peak list' nmr/set01/1/pdata/1/ bmse011066 1 1 spectrum_overview.pdf pdf 'Spectrum image' nmr/set01/1/pdata/1/ bmse011066 1 1 spectrum_overview.png image/png 'Spectral image' nmr/set01/1/pdata/1/ bmse011066 1 stop_ save_ #################### # NMR parameters # #################### ############################## # Assigned chemical shifts # ############################## ################################ # Chemical shift referencing # ################################ save_chem_shift_ref_set _Chem_shift_reference.Sf_category chem_shift_reference _Chem_shift_reference.Sf_framecode chem_shift_ref_set _Chem_shift_reference.Entry_ID bmse011066 _Chem_shift_reference.ID 1 loop_ _Chem_shift_ref.Atom_type _Chem_shift_ref.Atom_isotope_number _Chem_shift_ref.Mol_common_name _Chem_shift_ref.Atom_group _Chem_shift_ref.Chem_shift_units _Chem_shift_ref.Chem_shift_val _Chem_shift_ref.Ref_method _Chem_shift_ref.Ref_type _Chem_shift_ref.Indirect_shift_ratio _Chem_shift_ref.Entry_ID _Chem_shift_ref.Chem_shift_reference_ID H 1 TSP 'methyl protons' ppm 0.0 internal direct 1.0 bmse011066 1 stop_ save_ ######################### # Spectral peak lists # ######################### save_spectral_peaks_1D_1H _Spectral_peak_list.Sf_category spectral_peak_list _Spectral_peak_list.Sf_framecode spectral_peaks_1D_1H _Spectral_peak_list.Entry_ID bmse011066 _Spectral_peak_list.ID 1 _Spectral_peak_list.Sample_ID 1 _Spectral_peak_list.Sample_label $sample_1 _Spectral_peak_list.Sample_condition_list_ID 1 _Spectral_peak_list.Sample_condition_list_label $sample_conditions_1 _Spectral_peak_list.Experiment_ID 1 _Spectral_peak_list.Experiment_name '1D 1H' _Spectral_peak_list.Number_of_spectral_dimensions 1 _Spectral_peak_list.Assigned_chem_shift_list_ID 1 _Spectral_peak_list.Details 'F1: 1H' loop_ _Spectral_dim.ID _Spectral_dim.Spectrometer_frequency _Spectral_dim.Atom_type _Spectral_dim.Atom_isotope_number _Spectral_dim.Spectral_region _Spectral_dim.Sweep_width _Spectral_dim.Sweep_width_units _Spectral_dim.Entry_ID _Spectral_dim.Spectral_peak_list_ID 1 600.1728185 H 1 'Full H' 12.0157698570257 ppm bmse011066 1 stop_ loop_ _Spectral_peak_software.Software_ID _Spectral_peak_software.Software_label _Spectral_peak_software.Entry_ID _Spectral_peak_software.Spectral_peak_list_ID 1 $software_topspin bmse011066 1 stop_ loop_ _Peak.ID _Peak.Entry_ID _Peak.Spectral_peak_list_ID 1 bmse011066 1 2 bmse011066 1 3 bmse011066 1 4 bmse011066 1 5 bmse011066 1 6 bmse011066 1 7 bmse011066 1 8 bmse011066 1 9 bmse011066 1 stop_ loop_ _Peak_char.Peak_ID _Peak_char.Spectral_dim_ID _Peak_char.Chem_shift_val _Peak_char.Details _Peak_char.Entry_ID _Peak_char.Spectral_peak_list_ID 1 1 1.6635 14,15,17,18 bmse011066 1 2 1 4.6500 SUP bmse011066 1 3 1 2.6027 DMSO bmse011066 1 4 1 2.8056 7_m bmse011066 1 5 1 1.8756 17,18_m_Q1 bmse011066 1 6 1 1.5577 14,15_m bmse011066 1 7 1 7.9453 9,10_d_Q3 bmse011066 1 8 1 3.8354 16_s_Q2 bmse011066 1 9 1 7.5281 12,13_d bmse011066 1 stop_ loop_ _Peak_coupling.ID _Peak_coupling.Peak_ID _Peak_coupling.Spectral_dim_ID _Peak_coupling.Coupling_val _Peak_coupling.Entry_ID _Peak_coupling.Spectral_peak_list_ID 1 1 1 77.3202 bmse011066 1 2 2 1 0.0000 bmse011066 1 3 3 1 1.8707 bmse011066 1 4 4 1 8.0054 bmse011066 1 5 5 1 5.9146 bmse011066 1 6 6 1 5.3644 bmse011066 1 7 7 1 8.6931 bmse011066 1 8 8 1 0.0000 bmse011066 1 9 9 1 8.6931 bmse011066 1 stop_ loop_ _Spectral_transition.ID _Spectral_transition.Entry_ID _Spectral_transition.Spectral_peak_list_ID 1 bmse011066 1 2 bmse011066 1 3 bmse011066 1 4 bmse011066 1 5 bmse011066 1 6 bmse011066 1 7 bmse011066 1 8 bmse011066 1 9 bmse011066 1 10 bmse011066 1 11 bmse011066 1 12 bmse011066 1 13 bmse011066 1 14 bmse011066 1 15 bmse011066 1 16 bmse011066 1 17 bmse011066 1 18 bmse011066 1 19 bmse011066 1 20 bmse011066 1 21 bmse011066 1 22 bmse011066 1 23 bmse011066 1 24 bmse011066 1 25 bmse011066 1 26 bmse011066 1 27 bmse011066 1 28 bmse011066 1 stop_ loop_ _Spectral_transition_char.Spectral_transition_ID _Spectral_transition_char.Spectral_dim_ID _Spectral_transition_char.Chem_shift_val _Spectral_transition_char.Entry_ID _Spectral_transition_char.Spectral_peak_list_ID 1 1 1.7279 bmse011066 1 2 1 1.5991 bmse011066 1 3 1 4.6500 bmse011066 1 4 1 2.5965 bmse011066 1 5 1 2.5998 bmse011066 1 6 1 2.6029 bmse011066 1 7 1 2.6060 bmse011066 1 8 1 2.6089 bmse011066 1 9 1 2.8323 bmse011066 1 10 1 2.8192 bmse011066 1 11 1 2.8051 bmse011066 1 12 1 2.7925 bmse011066 1 13 1 2.7789 bmse011066 1 14 1 1.8954 bmse011066 1 15 1 1.8856 bmse011066 1 16 1 1.8816 bmse011066 1 17 1 1.8712 bmse011066 1 18 1 1.8559 bmse011066 1 19 1 1.5756 bmse011066 1 20 1 1.5563 bmse011066 1 21 1 1.5532 bmse011066 1 22 1 1.5442 bmse011066 1 23 1 1.5398 bmse011066 1 24 1 7.9381 bmse011066 1 25 1 7.9526 bmse011066 1 26 1 3.8354 bmse011066 1 27 1 7.5208 bmse011066 1 28 1 7.5353 bmse011066 1 stop_ save_