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Gated electron transfers and electron pathways in azurin: a NMR dynamic study at multiple fields and temperatures.

The NMRPipe system is a UNIX software environment of processing, graphics, and analysis tools designed to meet current routine and research-oriented multidimensional processing requirements, and to anticipate and accommodate future demands and developments. The system is based on UNIX pipes, which allow programs running simultaneously to exchange streams of data under user control. In an NMRPipe processing scheme, a stream of spectral data flows through a pipeline of processing programs, each of which performs one component of the overall scheme, such as Fourier transformation or linear prediction. Complete multidimensional processing schemes are constructed as simple UNIX shell scripts. The processing modules themselves maintain and exploit accurate records of data sizes, detection modes, and calibration information in all dimensions, so that schemes can be constructed without the need to explicitly define or anticipate data sizes or storage details of real and imaginary channels during processing. The asynchronous pipeline scheme provides other substantial advantages, including high flexibility, favorable processing speeds, choice of both all-in-memory and disk-bound processing, easy adaptation to different data formats, simpler software development and maintenance, and the ability to distribute processing tasks on multi-CPU computers and computer networks.
Delaglio F, Grzesiek S, Vuister GW, Zhu G, Pfeifer J, Bax A. Abstract NMRPipe: a multidimensional spectral processing system based on UNIX pipes. J Biomol NMR. 1995 Nov;6(3):277-93.
NMRPipe: a multidimensional spectral processing system based on UNIX pipes.

Orekhov, V. Y., Nolde, D. E., Golovanov, A. P., Korzhnev, D. M., Arseniev, A. S. Processing of heteronuclear NMR relaxation data with the new software DASHA. Applied Magnetic Resonance 9(4): 581-588. (1995).

MUNIN (Multidimensional NMR Spectra Interpretation), a recently introduced approach exploiting the mathematical concept of three-way decomposition, is proposed for separation and quantitative relaxation measurements of strongly overlapped resonances in sets of heteronuclear two-dimensional spectra that result from typical relaxation experiments. The approach is general and may also be applied to sets of two-dimensional spectra with arbitrary modulation along the third dimension (e.g., J-coupling, diffusion). Here, the method is applied for the analysis of 15N rotating frame relaxation data.

Korzhneva DM, Ibraghimov IV, Billeter M, Orekhov VY.
Abstract MUNIN: application of three-way decomposition to the analysis of
heteronuclear NMR relaxation data.
J Biomol NMR. 2001 Nov;21(3):263-8.

MUNIN: application of three-way decomposition to the analysis of heteronuclear NMR relaxation data.

Structure Of Cys 112 Asp Azurin From Pseudomonas Aeruginosa

Crystal Structure Of The Azurin Mutant Phe114ala From Pseudomonas Aeruginosa At 2.6 Angstroms Resolution

Crystal Structure Of Pseudomonas Aeruginosa Zinc Azurin Mutant Asp47asp At 2.4 Angstroms Resolution

Structural Features Of Azurin At 2.7 Angstroms Resolution

Structure Of Ruthenium-modified Pseudomonas Aeruginosa Azurin

Azurin From Pseudomonas Aeruginosa, Reduced Form, Ph 5.5

Azurin From Pseudomonas Aeruginosa, Reduced Form, Ph 9.0

Azurin From Pseudomonas Aeruginosa, Apo Form

Azurin Mutant With Met 121 Replaced By Glu

Crystal Structure Of The Disulphide Bond-Deficient Azurin Mutant C3aC26A: HOW IMPORTANT IS THE S-S Bond For Folding And Stabili

Crystal Structure Of The Double Mutant Cys3serSER100PRO From Pseudomonas Aeruginosa At 1.8 A Resolution

Re(I)-Tricarbonly Diimine (Q107h)) Azurin

X-Ray Crystal Structure The Two Site-Specific Mutants Ile7ser And Phe110ser Of Azurin From Pseudomonas Aeruginosa

Azurin Dimer, Covalently Crosslinked Through Bis- Maleimidomethylether

Azurin Dimer, Crosslinked Via Disulfide Bridge

Pseudomonas Aeruginosa Azurin Ru(Bpy)2(Im)(His83)

Pseudomonas Aeruginosa Oxidized Azurin(Cu2+) Ru(Tpy)(Phen) (His83)

Pseudomonas Aeruginosa Reduced Azurin (Cu1+) Ru(Tpy)(Phen) (His83)

Pseudomonas Aeruginosa Azurin Ru(tpy)(bpy)(his83)

Pseudomonas Aeruginosa Azurin Re(Phen)(Co)3(His83)

Pseudomonas Aeruginosa Azurin Os(Bpy)2(Im)(His83)

Crystal Structure Of The Azurin Mutant Nickel-trp48met From Pseudomonas Aeruginosa At 2.2 Angstroms Resolution

Structure Of Electron Transfer (cobalt-protein)

The D62cK74C DOUBLE MUTANT OF PSEUDOMONAS AERUGINOSA AZURIN

The K24r Mutant Of Pseudomonas Aeruginosa Azurin

Zn Substituted Form Of D62cK74C DOUBLE MUTANT OF PSEUDOMONAS Aeruginosa Azurin

X-ray Crystal Structure Of The Two Site-specific Mutants His35*gln And His35*leu Of Azurin From Pseudomonas Aeruginosa

Pseudomonas Aeruginosa E2qH83QM109H-Azurin Re(Phen)(Co)3

Crystal Structure Of Azurin Phe114pro Mutant

Crystal Structure Of Cu(I) Phe114pro Azurin Mutant

Crystal Structure Of Re(Phen)(Co)3 (Thr124his)(His83gln) Azurin Cu(Ii) From Pseudomonas Aeruginosa

P. Aeruginosa Azurin N42c/m64e Double Mutant, Bmme-linked Dimer

Structure Of A Cavity Mutant (H117g) Of Pseudomonas Aeruginosa Azurin

Disulfide-Linked Dimer Of Azurin N42cM64E DOUBLE MUTANT

X-ray Crystal Structure Of The Two Site-specific Mutants His35gln And His35leu Of Azurin From Pseudomonas Aeruginosa

Pseudomonas Aeruginosa E2qH83QT126H-Azurin Re(Phen)(Co)3

Crystal Structure Of The F114pM121Q VARIANT OF PSEUDOMONAS Aeruginosa Azurin In The Cu(Ii) State

Crystal Structure Of The N47sM121L VARIANT OF PSEUDOMONAS Aeruginosa Azurin In The Cu(Ii) State

Cu(Ii) N47sM121L VARIANT OF PSEUDOMONAS AERUGINOSA AZURIN

Cu(Ii) N47sF114N VARIANT OF PSEUDOMONAS AERUGINOSA AZURIN

C112dM121E PSEUDOMONAS AERUGINOSA AZURIN

Silver Metallated Pseudomonas Aeruginosa Azurin At 1.70 A

Crystal Structure Analysis Of Oxidized Pseudomonas Aeruginosa Azurin At Ph 5.5 And Ph 9.0. A Ph-Induced Conformational Transiti

Crystal Structure Of Spin Labelled Azurin T21r1

Crystal Structure Of Pseudomonas Aeruginosa Azurin With Iron(Ii) At The Copper-Binding Site.

Mercury Metallated Pseudomonas Aeruginosa Azurin At 1.54 A

Investigating The Functional Significance Of The Interlocked Pair Structural Determinants In Pseudomonas Aeruginosa Azurin (v31

Investigating The Functional Significance Of The Interlocked Pair Structural Determinants In Pseudomonas Aeruginosa Azurin (v95

azurin precursor [Pseudomonas aeruginosa NCGM2.S1]

azurin precursor [Pseudomonas aeruginosa]

azurin precursor [Pseudomonas aeruginosa NCMG1179]

unnamed protein product [Pseudomonas aeruginosa]

azurin precursor [Pseudomonas aeruginosa LESB58]

azurin precursor [Pseudomonas aeruginosa 18A]

azurin precursor [Pseudomonas aeruginosa PAO1]

azurin precursor [Pseudomonas aeruginosa UCBPP-PA14]

RecName: Full=Azurin [Pseudomonas aeruginosa]

RecName: Full=Azurin; Flags: Precursor [Pseudomonas aeruginosa PAO1]

NMR Relaxation data for Protein Azurin from Pseudomonas aeruginosa

15N-1H HSQC experiments were recorded with different longitudinal relaxation
periods.
15N T2 experiments were recorded with different values for the duration
of the CPMG sequence.
Two spectra were collected for the measurement of the 1H-15N NOE: one
with proton saturation and one without.