data_bmse000816

#######################
#  Entry information  #
#######################

save_entry_information
   _Entry.Sf_category                   entry_information
   _Entry.Sf_framecode                  entry_information
   _Entry.ID                            bmse000816
   _Entry.Title                         uridine
   _Entry.Version_type                  update
   _Entry.Submission_date               2011-07-27
   _Entry.Accession_date                2011-07-27
   _Entry.Last_release_date             2012-10-17
   _Entry.Original_release_date         2011-07-27
   _Entry.Origination                   author
   _Entry.NMR_STAR_version              3.1.1.21
   _Entry.Original_NMR_STAR_version     3.1
   _Entry.Experimental_method           NMR
   _Entry.Experimental_method_subtype   solution
   _Entry.DOI                           10.13018/BMSE000816
   _Entry.BMRB_internal_directory_name  uridine

   loop_
      _Entry_author.Ordinal
      _Entry_author.Given_name
      _Entry_author.Family_name
      _Entry_author.First_initial
      _Entry_author.Entry_ID

     1   Dan   Bearden   D.   bmse000816    

   stop_

   loop_
      _Entry_src.ID
      _Entry_src.Organization_full_name
      _Entry_src.Organization_initials
      _Entry_src.Entry_ID

     1   'National Institute of Standards and Technology, Hollings Marine Laboratory'   NIST   bmse000816    

   stop_

   loop_
      _Release.Release_number
      _Release.Format_type
      _Release.Format_version
      _Release.Date
      _Release.Submission_date
      _Release.Type
      _Release.Author
      _Release.Detail
      _Release.Entry_ID

     1   .   .   2011-08-19   2011-07-27   original   BMRB   'Original spectra from Birmingham'                                                     bmse000816    
     2   .   .   2011-09-09   2011-07-27   update     BMRB   'Brought up to date with latest Dictionary'                                            bmse000816    
     3   .   .   2011-12-14   2011-07-27   update     BMRB   'Set Assembly.Name to match Chem_comp.name'                                            bmse000816    
     4   .   .   2012-01-06   2011-07-27   update     BMRB   'added spectrometer model and probe info'                                              bmse000816    
     5   .   .   2012-09-13   2011-07-27   update     BMRB   'Added PubChem SID 126596856 to database loop'                                         bmse000816    
     6   .   .   2012-09-18   2011-07-27   update     BMRB   'Fixed bad reference concentrations in sample loops'                                   bmse000816    
     7   .   .   2012-10-17   2011-07-27   update     BMRB   'Set all _Chem_comp_SMILES Types to lower case'                                        bmse000816    
     8   .   .   2017-10-12   2017-10-12   update     BMRB   'Remediated Experiment_file loop if present and standardized mol and png file tags.'   bmse000816    
     9   .   .   2017-12-19   2017-10-12   update     BMRB   'InChI numbering updated according to ALATIS'                                          bmse000816    

   stop_

save_

###############
#  Citations  #
###############

save_citation_1
   _Citation.Sf_category   citations
   _Citation.Sf_framecode  citation_1
   _Citation.Entry_ID      bmse000816
   _Citation.ID            1
   _Citation.Class         'reference citation'
   _Citation.PubMed_ID     17170002
   _Citation.Title         'Database resources of the National Center for Biotechnology Information.'
   _Citation.Status        published
   _Citation.Type          internet
   _Citation.WWW_URL       http://pubchem.ncbi.nlm.nih.gov/
   _Citation.Year          2006

   loop_
      _Citation_author.Ordinal
      _Citation_author.Given_name
      _Citation_author.Family_name
      _Citation_author.First_initial
      _Citation_author.Middle_initials
      _Citation_author.Entry_ID
      _Citation_author.Citation_ID

     1    D.   Wheeler      D.   L.   bmse000816   1    
     2    T.   Barrett      T.   ?    bmse000816   1    
     3    D.   Benson       D.   A.   bmse000816   1    
     4    S.   Bryant       S.   H.   bmse000816   1    
     5    K.   Canese       K.   ?    bmse000816   1    
     6    V.   Chetvenin    V.   ?    bmse000816   1    
     7    D.   Church       D.   M.   bmse000816   1    
     8    M.   DiCuccio     M.   ?    bmse000816   1    
     9    R.   Edgar        R.   ?    bmse000816   1    
     10   S.   Federhen     S.   ?    bmse000816   1    
     11   L.   Geer         L.   Y.   bmse000816   1    
     12   W.   Helmberg     W.   ?    bmse000816   1    
     13   Y.   Kapustin     Y.   ?    bmse000816   1    
     14   D.   Kenton       D.   L.   bmse000816   1    
     15   O.   Khovayko     O.   ?    bmse000816   1    
     16   D.   Lipman       D.   J.   bmse000816   1    
     17   T.   Madden       T.   L.   bmse000816   1    
     18   D.   Maglott      D.   R.   bmse000816   1    
     19   J.   Ostell       J.   ?    bmse000816   1    
     20   K.   Pruitt       K.   D.   bmse000816   1    
     21   G.   Schuler      G.   D.   bmse000816   1    
     22   L.   Schriml      L.   M.   bmse000816   1    
     23   E.   Sequeira     E.   ?    bmse000816   1    
     24   S.   Sherry       S.   T.   bmse000816   1    
     25   K.   Sirotkin     K.   ?    bmse000816   1    
     26   A.   Souvorov     A.   ?    bmse000816   1    
     27   G.   Starchenko   G.   ?    bmse000816   1    
     28   T.   Suzek        T.   O.   bmse000816   1    
     29   R.   Tatusov      R.   ?    bmse000816   1    
     30   T.   Tatusova     T.   A.   bmse000816   1    
     31   L.   Bagner       L.   ?    bmse000816   1    
     32   E.   Yaschenko    E.   ?    bmse000816   1    

   stop_

save_

#############################################
#  Molecular system (assembly) description  #
#############################################

save_assembly
   _Assembly.Sf_category           assembly
   _Assembly.Sf_framecode          assembly
   _Assembly.Entry_ID              bmse000816
   _Assembly.ID                    1
   _Assembly.Name                  Uridine
   _Assembly.Number_of_components  1
   _Assembly.Organic_ligands       0
   _Assembly.Non_standard_bonds    no
   _Assembly.Paramagnetic          no
   _Assembly.Thiol_state           'not reported'

   loop_
      _Entity_assembly.ID
      _Entity_assembly.Entity_assembly_name
      _Entity_assembly.Entity_ID
      _Entity_assembly.Entity_label
      _Entity_assembly.Experimental_data_reported
      _Entity_assembly.Physical_state
      _Entity_assembly.Conformational_isomer
      _Entity_assembly.Chemical_exchange_state
      _Entity_assembly.Entry_ID
      _Entity_assembly.Assembly_ID

     1   uridine   1   $uridine   yes   native   no   no   bmse000816   1    

   stop_

save_

    ####################################
    #  Biological polymers and ligands #
    ####################################

save_uridine
   _Entity.Sf_category                      entity
   _Entity.Sf_framecode                     uridine
   _Entity.Entry_ID                         bmse000816
   _Entity.ID                               1
   _Entity.Name                             Uridine
   _Entity.Type                             non-polymer
   _Entity.Ambiguous_conformational_states  no
   _Entity.Ambiguous_chem_comp_sites        no
   _Entity.Nstd_monomer                     no
   _Entity.Nstd_chirality                   no
   _Entity.Nstd_linkage                     no
   _Entity.Paramagnetic                     no
   _Entity.Thiol_state                      'not reported'

   loop_
      _Entity_comp_index.ID
      _Entity_comp_index.Comp_ID
      _Entity_comp_index.Comp_label
      _Entity_comp_index.Entry_ID
      _Entity_comp_index.Entity_ID

     1   1   $chem_comp_1   bmse000816   1    

   stop_

save_

    ####################
    #  Natural source  #
    ####################

save_natural_source
   _Entity_natural_src_list.Sf_category   natural_source
   _Entity_natural_src_list.Sf_framecode  natural_source
   _Entity_natural_src_list.Entry_ID      bmse000816
   _Entity_natural_src_list.ID            1

   loop_
      _Entity_natural_src.ID
      _Entity_natural_src.Entity_ID
      _Entity_natural_src.Entity_label
      _Entity_natural_src.NCBI_taxonomy_ID
      _Entity_natural_src.Type
      _Entity_natural_src.Common
      _Entity_natural_src.Organism_name_scientific
      _Entity_natural_src.Organism_name_common
      _Entity_natural_src.Superkingdom
      _Entity_natural_src.Kingdom
      _Entity_natural_src.Genus
      _Entity_natural_src.Species
      _Entity_natural_src.Entry_ID
      _Entity_natural_src.Entity_natural_src_list_ID

     1   1   $uridine   n/a   'multiple natural sources'   yes   'not applicable'   n/a   n/a   n/a   n/a   n/a   bmse000816   1    

   stop_

save_

    #########################
    #  Experimental source  #
    #########################

save_experimental_source
   _Entity_experimental_src_list.Sf_category   experimental_source
   _Entity_experimental_src_list.Sf_framecode  experimental_source
   _Entity_experimental_src_list.Entry_ID      bmse000816
   _Entity_experimental_src_list.ID            1

   loop_
      _Entity_experimental_src.ID
      _Entity_experimental_src.Entity_ID
      _Entity_experimental_src.Entity_label
      _Entity_experimental_src.Production_method
      _Entity_experimental_src.Entry_ID
      _Entity_experimental_src.Entity_experimental_src_list_ID

     1   1   $uridine   'chemical synthesis'   bmse000816   1    

   stop_

save_

    #################################
    #  Polymer residues and ligands #
    #################################

save_chem_comp_1
   _Chem_comp.Sf_category                  chem_comp
   _Chem_comp.Sf_framecode                 chem_comp_1
   _Chem_comp.Entry_ID                     bmse000816
   _Chem_comp.ID                           1
   _Chem_comp.Provenance                   PubChem
   _Chem_comp.Name                         Uridine
   _Chem_comp.Type                         non-polymer
   _Chem_comp.InChI_code                   InChI=1S/C9H12N2O6/c12-3-4-6(14)7(15)8(17-4)11-2-1-5(13)10-9(11)16/h1-2,4,6-8,12,14-15H,3H2,(H,10,13,16)/t4-,6-,7-,8-/m1/s1
   _Chem_comp.Paramagnetic                 no
   _Chem_comp.Aromatic                     yes
   _Chem_comp.Formula                      'C9 H12 N2 O6'
   _Chem_comp.Formula_weight               244.2013800000
   _Chem_comp.Formula_mono_iso_wt_nat      244.069536128
   _Chem_comp.Formula_mono_iso_wt_13C      253.099729668
   _Chem_comp.Formula_mono_iso_wt_15N      246.063605915
   _Chem_comp.Formula_mono_iso_wt_13C_15N  255.0937994548
   _Chem_comp.Image_file_name              bmse000816.png
   _Chem_comp.Image_file_format            png
   _Chem_comp.Struct_file_name             bmse000816.mol
   _Chem_comp.Struct_file_format           mol

   loop_
      _Chem_comp_common_name.Name
      _Chem_comp_common_name.Type
      _Chem_comp_common_name.Entry_ID
      _Chem_comp_common_name.Comp_ID

     'Uracil, 1-beta-D-ribofuranosyl-'   synonym   bmse000816   1    
     1-beta-D-Ribofuranosyluracil        synonym   bmse000816   1    
     URIDINE                             synonym   bmse000816   1    
     Uridin                              synonym   bmse000816   1    
     'Uracil riboside'                   synonym   bmse000816   1    
     Uridine                             synonym   bmse000816   1    
     Urd                                 synonym   bmse000816   1    

   stop_

   loop_
      _Chem_comp_descriptor.Descriptor
      _Chem_comp_descriptor.Type
      _Chem_comp_descriptor.Program
      _Chem_comp_descriptor.Program_version
      _Chem_comp_descriptor.Entry_ID
      _Chem_comp_descriptor.Comp_ID

     
;
InChI=1S/C9H12N2O6/c12-3-4-6(14)7(15)8(17-4)11-2-1-5(13)10-9(11)16/h1-2,4,6-8,12,14-15H,3H2,(H,10,13,16)/t4-,6-,7-,8-/m1/s1
;
INCHI   na       na      bmse000816   1    
     InChI=1S/C9H12N2O6/c12-3-4-6(14)7(15)8(17-4)11-2-1-5(13)10-9(11)16/h1-2,4,6-8,12,14-15H,3H2,(H,10,13,16)/t4-,6-,7-,8-/m1/s1    INCHI   ALATIS   3.003   bmse000816   1    

   stop_

   loop_
      _Chem_comp_systematic_name.Name
      _Chem_comp_systematic_name.Naming_system
      _Chem_comp_systematic_name.Entry_ID
      _Chem_comp_systematic_name.Comp_ID

     1-[(2R,3R,4R,5R)-3,4-dihydroxy-5-(hydroxymethyl)oxolan-2-yl]pyrimidine-2,4-dione            IUPAC               bmse000816   1    
     1-[(2R,3R,4R,5R)-3,4-dihydroxy-5-methylol-tetrahydrofuran-2-yl]pyrimidine-2,4-quinone       IUPAC_TRADITIONAL   bmse000816   1    
     1-[(2R,3R,4R,5R)-3,4-dihydroxy-5-(hydroxymethyl)tetrahydrofuran-2-yl]pyrimidine-2,4-dione   IUPAC_CAS           bmse000816   1    
     1-[(2R,3R,4R,5R)-3,4-dihydroxy-5-(hydroxymethyl)tetrahydrofuran-2-yl]pyrimidine-2,4-dione   IUPAC_OPENEYE       bmse000816   1    
     1-[(2R,3R,4R,5R)-3,4-dihydroxy-5-(hydroxymethyl)oxolan-2-yl]pyrimidine-2,4-dione            IUPAC_SYSTEMATIC    bmse000816   1    

   stop_

   loop_
      _Chem_comp_SMILES.Type
      _Chem_comp_SMILES.String
      _Chem_comp_SMILES.Entry_ID
      _Chem_comp_SMILES.Comp_ID

     isomeric    C1=CN(C(=O)NC1=O)[C@H]2[C@@H]([C@@H]([C@H](O2)CO)O)O   bmse000816   1    
     canonical   C1=CN(C(=O)NC1=O)C2C(C(C(O2)CO)O)O                     bmse000816   1    

   stop_

   loop_
      _Chem_comp_atom.Atom_ID
      _Chem_comp_atom.Type_symbol
      _Chem_comp_atom.Drawing_2D_coord_x
      _Chem_comp_atom.Drawing_2D_coord_y
      _Chem_comp_atom.PDBX_ordinal
      _Chem_comp_atom.Entry_ID
      _Chem_comp_atom.Comp_ID

     H18   H   5.6238   2.2671    1    bmse000816   1    
     H19   H   5.6238   0.6471    2    bmse000816   1    
     H23   H   3.1085   -1.9847   3    bmse000816   1    
     H24   H   2.9734   -1.5691   4    bmse000816   1    
     H22   H   5.3332   -1.9847   5    bmse000816   1    
     H25   H   3.6684   -0.2614   6    bmse000816   1    
     H20   H   4.7514   -3.1625   7    bmse000816   1    
     H21   H   5.4795   -3.4867   8    bmse000816   1    
     H26   H   2.8179   2.2671    9    bmse000816   1    
     H28   H   3.3852   -3.4571   10   bmse000816   1    
     H29   H   2.0000   -1.2365   11   bmse000816   1    
     H27   H   6.6676   -3.2878   12   bmse000816   1    
     C1    C   5.0868   1.9571    13   bmse000816   1    
     C2    C   5.0868   0.9571    14   bmse000816   1    
     C5    C   4.2208   2.4571    15   bmse000816   1    
     C9    C   3.3548   0.9571    16   bmse000816   1    
     C6    C   3.7208   -2.0817   17   bmse000816   1    
     C7    C   3.4118   -1.1307   18   bmse000816   1    
     C4    C   4.7208   -2.0817   19   bmse000816   1    
     C8    C   4.2208   -0.5429   20   bmse000816   1    
     C3    C   5.3086   -2.8907   21   bmse000816   1    
     N10   N   3.3548   1.9571    22   bmse000816   1    
     N11   N   4.2208   0.4571    23   bmse000816   1    
     O13   O   4.2208   3.4571    24   bmse000816   1    
     O16   O   2.4888   0.4571    25   bmse000816   1    
     O17   O   5.0298   -1.1307   26   bmse000816   1    
     O14   O   3.1330   -2.8907   27   bmse000816   1    
     O15   O   2.4607   -0.8216   28   bmse000816   1    
     O12   O   6.3031   -2.7862   29   bmse000816   1    

   stop_

   loop_
      _Atom_nomenclature.Atom_ID
      _Atom_nomenclature.Atom_name
      _Atom_nomenclature.Naming_system
      _Atom_nomenclature.Entry_ID
      _Atom_nomenclature.Comp_ID

     H18   H1    BMRB     bmse000816   1    
     H19   H2    BMRB     bmse000816   1    
     H23   H3    BMRB     bmse000816   1    
     H24   H4    BMRB     bmse000816   1    
     H22   H5    BMRB     bmse000816   1    
     H25   H6    BMRB     bmse000816   1    
     H20   H7    BMRB     bmse000816   1    
     H21   H8    BMRB     bmse000816   1    
     H26   H9    BMRB     bmse000816   1    
     H28   H10   BMRB     bmse000816   1    
     H29   H11   BMRB     bmse000816   1    
     H27   H12   BMRB     bmse000816   1    
     C1    C13   BMRB     bmse000816   1    
     C2    C14   BMRB     bmse000816   1    
     C5    C15   BMRB     bmse000816   1    
     C9    C16   BMRB     bmse000816   1    
     C6    C17   BMRB     bmse000816   1    
     C7    C18   BMRB     bmse000816   1    
     C4    C19   BMRB     bmse000816   1    
     C8    C20   BMRB     bmse000816   1    
     C3    C21   BMRB     bmse000816   1    
     N10   N22   BMRB     bmse000816   1    
     N11   N23   BMRB     bmse000816   1    
     O13   O24   BMRB     bmse000816   1    
     O16   O25   BMRB     bmse000816   1    
     O17   O26   BMRB     bmse000816   1    
     O14   O27   BMRB     bmse000816   1    
     O15   O28   BMRB     bmse000816   1    
     O12   O29   BMRB     bmse000816   1    
     H18   H18   ALATIS   bmse000816   1    
     H19   H19   ALATIS   bmse000816   1    
     H23   H23   ALATIS   bmse000816   1    
     H24   H24   ALATIS   bmse000816   1    
     H22   H22   ALATIS   bmse000816   1    
     H25   H25   ALATIS   bmse000816   1    
     H20   H20   ALATIS   bmse000816   1    
     H21   H21   ALATIS   bmse000816   1    
     H26   H26   ALATIS   bmse000816   1    
     H28   H28   ALATIS   bmse000816   1    
     H29   H29   ALATIS   bmse000816   1    
     H27   H27   ALATIS   bmse000816   1    
     C1    C1    ALATIS   bmse000816   1    
     C2    C2    ALATIS   bmse000816   1    
     C5    C5    ALATIS   bmse000816   1    
     C9    C9    ALATIS   bmse000816   1    
     C6    C6    ALATIS   bmse000816   1    
     C7    C7    ALATIS   bmse000816   1    
     C4    C4    ALATIS   bmse000816   1    
     C8    C8    ALATIS   bmse000816   1    
     C3    C3    ALATIS   bmse000816   1    
     N10   N10   ALATIS   bmse000816   1    
     N11   N11   ALATIS   bmse000816   1    
     O13   O13   ALATIS   bmse000816   1    
     O16   O16   ALATIS   bmse000816   1    
     O17   O17   ALATIS   bmse000816   1    
     O14   O14   ALATIS   bmse000816   1    
     O15   O15   ALATIS   bmse000816   1    
     O12   O12   ALATIS   bmse000816   1    

   stop_

   loop_
      _Chem_comp_bond.ID
      _Chem_comp_bond.Type
      _Chem_comp_bond.Value_order
      _Chem_comp_bond.Atom_ID_1
      _Chem_comp_bond.Atom_ID_2
      _Chem_comp_bond.Entry_ID
      _Chem_comp_bond.Comp_ID

     1    covalent   SING   H18   C1    bmse000816   1    
     2    covalent   SING   H19   C2    bmse000816   1    
     3    covalent   SING   H23   C6    bmse000816   1    
     4    covalent   SING   H24   C7    bmse000816   1    
     5    covalent   SING   H22   C4    bmse000816   1    
     6    covalent   SING   H25   C8    bmse000816   1    
     7    covalent   SING   H20   C3    bmse000816   1    
     8    covalent   SING   H21   C3    bmse000816   1    
     9    covalent   SING   H26   N10   bmse000816   1    
     10   covalent   SING   H28   O14   bmse000816   1    
     11   covalent   SING   H29   O15   bmse000816   1    
     12   covalent   SING   H27   O12   bmse000816   1    
     13   covalent   DOUB   C1    C2    bmse000816   1    
     14   covalent   SING   C1    C5    bmse000816   1    
     15   covalent   SING   C2    N11   bmse000816   1    
     16   covalent   SING   C5    N10   bmse000816   1    
     17   covalent   DOUB   C5    O13   bmse000816   1    
     18   covalent   SING   C9    N10   bmse000816   1    
     19   covalent   SING   C9    N11   bmse000816   1    
     20   covalent   DOUB   C9    O16   bmse000816   1    
     21   covalent   SING   C6    C7    bmse000816   1    
     22   covalent   SING   C6    C4    bmse000816   1    
     23   covalent   SING   C6    O14   bmse000816   1    
     24   covalent   SING   C7    C8    bmse000816   1    
     25   covalent   SING   C7    O15   bmse000816   1    
     26   covalent   SING   C4    C3    bmse000816   1    
     27   covalent   SING   C4    O17   bmse000816   1    
     28   covalent   SING   C8    N11   bmse000816   1    
     29   covalent   SING   C8    O17   bmse000816   1    
     30   covalent   SING   C3    O12   bmse000816   1    

   stop_

   loop_
      _Chem_comp_db_link.Author_supplied
      _Chem_comp_db_link.Database_code
      _Chem_comp_db_link.Accession_code
      _Chem_comp_db_link.Accession_code_type
      _Chem_comp_db_link.Entry_mol_name
      _Chem_comp_db_link.Entry_relation_type
      _Chem_comp_db_link.Entry_ID
      _Chem_comp_db_link.Comp_ID

     no   PubChem          126596856    sid                    Uridine   'matching entry'   bmse000816   1    
     no   PubChem          148890       sid                    Uridine   'matching entry'   bmse000816   1    
     no   PubChem          6029         cid                    Uridine   'matching entry'   bmse000816   1    
     no   PubChem          3593         sid                    Uridine   'matching entry'   bmse000816   1    
     no   KEGG             C00299       'compound ID'          Uridine   'matching entry'   bmse000816   1    
     no   'CAS Registry'   12693-39-9   'registry number'      Uridine   'matching entry'   bmse000816   1    
     no   'CAS Registry'   58-96-8      'registry number'      Uridine   'matching entry'   bmse000816   1    
     no   'CAS Registry'   68184-15-6   'registry number'      Uridine   'matching entry'   bmse000816   1    
     no   CHEBI            16704        ?                      Uridine   'matching entry'   bmse000816   1    
     no   EINECS           200-407-5    ?                      Uridine   'matching entry'   bmse000816   1    
     no   NSC              20256        ?                      Uridine   'matching entry'   bmse000816   1    
     no   PDB              URI          'Chemical Component'   Uridine   'matching entry'   bmse000816   1    

   stop_

   loop_
      _Chem_comp_citation.Citation_ID
      _Chem_comp_citation.Citation_label
      _Chem_comp_citation.Entry_ID
      _Chem_comp_citation.Comp_ID

     1   $citation_1   bmse000816   1    

   stop_

save_

#####################################
#  Sample contents and methodology  #
#####################################
	 
    ########################
    #  Sample description  #
    ########################

save_sample_1
   _Sample.Sf_category   sample
   _Sample.Sf_framecode  sample_1
   _Sample.Entry_ID      bmse000816
   _Sample.ID            1
   _Sample.Type          solution

   loop_
      _Sample_component.ID
      _Sample_component.Mol_common_name
      _Sample_component.Isotopic_labeling
      _Sample_component.Entity_ID
      _Sample_component.Entity_label
      _Sample_component.Type
      _Sample_component.Concentration_val
      _Sample_component.Concentration_val_units
      _Sample_component.Vendor
      _Sample_component.Vendor_product_name
      _Sample_component.Entry_ID
      _Sample_component.Sample_ID

     1   Uridine              'natural abundance'   1   $uridine   Solute      20    mM   sigma   Uridine   bmse000816   1    
     2   D2O                  ?                     ?   ?          Solvent     100   %    ?       ?         bmse000816   1    
     3   'sodium phosphate'   ?                     ?   ?          Buffer      200   mM   ?       ?         bmse000816   1    
     4   'sodium azide'       ?                     ?   ?          Cytocide    500   uM   ?       ?         bmse000816   1    
     5   DSS                  ?                     ?   ?          Reference   500   uM   ?       ?         bmse000816   1    

   stop_

save_

#######################
#  Sample conditions  #
#######################

save_sample_conditions_1
   _Sample_condition_list.Sf_category   sample_conditions
   _Sample_condition_list.Sf_framecode  sample_conditions_1
   _Sample_condition_list.Entry_ID      bmse000816
   _Sample_condition_list.ID            1

   loop_
      _Sample_condition_variable.Type
      _Sample_condition_variable.Val
      _Sample_condition_variable.Val_units
      _Sample_condition_variable.Entry_ID
      _Sample_condition_variable.Sample_condition_list_ID

     pH            7.4   pH   bmse000816   1    
     temperature   298   K    bmse000816   1    

   stop_

save_

############################
#  Computer software used  #
############################

save_software_1
   _Software.Sf_category   software
   _Software.Sf_framecode  software_1
   _Software.Entry_ID      bmse000816
   _Software.ID            1
   _Software.Name          TopSpin
   _Software.Version       2.1

   loop_
      _Vendor.Name
      _Vendor.Entry_ID
      _Vendor.Software_ID

     'Bruker Biospin'   bmse000816   1    

   stop_

   loop_
      _Task.Task
      _Task.Entry_ID
      _Task.Software_ID

     Collection        bmse000816   1    
     Processing        bmse000816   1    
     'Data analysis'   bmse000816   1    
     'Peak picking'    bmse000816   1    

   stop_

save_

#########################
#  Experimental detail  #
#########################

    ##################################
    #  NMR Spectrometer definitions  #
    ##################################

save_Bruker_700
   _NMR_spectrometer.Sf_category     NMR_spectrometer
   _NMR_spectrometer.Sf_framecode    Bruker_700
   _NMR_spectrometer.Entry_ID        bmse000816
   _NMR_spectrometer.ID              1
   _NMR_spectrometer.Manufacturer    Bruker
   _NMR_spectrometer.Model           'Avance II'
   _NMR_spectrometer.Field_strength  700

save_

save_TCI_cryoprobe
   _NMR_spectrometer_probe.Sf_category   NMR_spectrometer_probe
   _NMR_spectrometer_probe.Sf_framecode  TCI_cryoprobe
   _NMR_spectrometer_probe.Entry_ID      bmse000816
   _NMR_spectrometer_probe.ID            1
   _NMR_spectrometer_probe.Details       'single z-axis gradient'
   _NMR_spectrometer_probe.Manufacturer  Bruker
   _NMR_spectrometer_probe.Model         'TCI CryoProbe'
   _NMR_spectrometer_probe.Diameter      5

   loop_
      _NMR_probe.Type
      _NMR_probe.Entry_ID
      _NMR_probe.NMR_spectrometer_probe_ID

     Cryoprobe   bmse000816   1    

   stop_

save_

    #############################
    #  NMR applied experiments  #
    #############################

save_experiment_list
   _Experiment_list.Sf_category   experiment_list
   _Experiment_list.Sf_framecode  experiment_list
   _Experiment_list.Entry_ID      bmse000816
   _Experiment_list.ID            1

   loop_
      _Experiment.ID
      _Experiment.Name
      _Experiment.Raw_data_flag
      _Experiment.Sample_ID
      _Experiment.Sample_label
      _Experiment.Sample_state
      _Experiment.Sample_condition_list_ID
      _Experiment.Sample_condition_list_label
      _Experiment.NMR_spectrometer_ID
      _Experiment.NMR_spectrometer_label
      _Experiment.Entry_ID
      _Experiment.Experiment_list_ID

     1   '2D J-resolved 1H'   yes   1   $sample_1   isotropic   1   $sample_conditions_1   1   $Bruker_700   bmse000816   1    
     2   '2D [1H,13C]-HSQC'   yes   1   $sample_1   isotropic   1   $sample_conditions_1   1   $Bruker_700   bmse000816   1    
     3   '1D 1H, NOESY'       yes   1   $sample_1   isotropic   1   $sample_conditions_1   1   $Bruker_700   bmse000816   1    

   stop_

   loop_
      _Experiment_file.Experiment_ID
      _Experiment_file.Name
      _Experiment_file.Type
      _Experiment_file.Directory_path
      _Experiment_file.Details
      _Experiment_file.Entry_ID
      _Experiment_file.Experiment_list_ID

     1   1H_1H_JRES    text/directory   nmr/set01/                      'NMR experiment directory'   bmse000816   1    
     1   00.png        image/png        nmr/set01/spectra/1H_1H_JRES    'Spectral image'             bmse000816   1    
     1   01.png        image/png        nmr/set01/spectra/1H_1H_JRES    'Spectral image'             bmse000816   1    
     2   1H_13C_HSQC   text/directory   nmr/set01/                      'NMR experiment directory'   bmse000816   1    
     2   00.png        image/png        nmr/set01/spectra/1H_13C_HSQC   'Spectral image'             bmse000816   1    
     2   01.png        image/png        nmr/set01/spectra/1H_13C_HSQC   'Spectral image'             bmse000816   1    
     3   1H_NOESY      text/directory   nmr/set01/                      'NMR experiment directory'   bmse000816   1    
     3   00.png        image/png        nmr/set01/spectra/1H_NOESY      'Spectral image'             bmse000816   1    
     3   01.png        image/png        nmr/set01/spectra/1H_NOESY      'Spectral image'             bmse000816   1    
     3   02.png        image/png        nmr/set01/spectra/1H_NOESY      'Spectral image'             bmse000816   1    

   stop_

save_

####################
#  NMR parameters  #
####################

    ##############################
    #  Assigned chemical shifts  #
    ##############################

	################################
	#  Chemical shift referencing  #
	################################

save_chem_shift_reference
   _Chem_shift_reference.Sf_category   chem_shift_reference
   _Chem_shift_reference.Sf_framecode  chem_shift_reference
   _Chem_shift_reference.Entry_ID      bmse000816
   _Chem_shift_reference.ID            1

   loop_
      _Chem_shift_ref.Atom_type
      _Chem_shift_ref.Atom_isotope_number
      _Chem_shift_ref.Mol_common_name
      _Chem_shift_ref.Atom_group
      _Chem_shift_ref.Chem_shift_units
      _Chem_shift_ref.Chem_shift_val
      _Chem_shift_ref.Ref_method
      _Chem_shift_ref.Ref_type
      _Chem_shift_ref.Indirect_shift_ratio
      _Chem_shift_ref.Entry_ID
      _Chem_shift_ref.Chem_shift_reference_ID

     H   1    DSS   'methyl protons'   ppm   0.00   internal   direct   1.000000000   bmse000816   1    
     C   13   DSS   'methyl carbons'   ppm   0.00   internal   direct   1.000000000   bmse000816   1    

   stop_

save_