data_50189 ####################### # Entry information # ####################### save_entry_information _Saveframe_category entry_information _Entry_title ; hnRNPF prion-like domain 365-415 backbone and Cbeta chemical shifts ; _BMRB_accession_number 50189 _BMRB_flat_file_name bmr50189.str _Entry_type original _Submission_date 2020-02-03 _Accession_date 2020-02-03 _Entry_origination author _NMR_STAR_version 2.1.1 _Experimental_method NMR _Details . loop_ _Author_ordinal _Author_family_name _Author_given_name _Author_middle_initials _Author_family_title 1 Ryan Veronica H. . 2 Fawzi Nicolas L. . stop_ loop_ _Saveframe_category_type _Saveframe_category_type_count assigned_chemical_shifts 1 stop_ loop_ _Data_type _Data_type_count "1H chemical shifts" 51 "13C chemical shifts" 142 "15N chemical shifts" 51 stop_ loop_ _Revision_date _Revision_keyword _Revision_author _Revision_detail 2020-12-07 original BMRB . stop_ _Original_release_date 2020-02-03 save_ ############################# # Citation for this entry # ############################# save_citations_1 _Saveframe_category entry_citation _Citation_full . _Citation_title ; hnRNPF prion-like domain 365-415 backbone and Cbeta chemical shifts ; _Citation_status 'in preparation' _Citation_type journal _CAS_abstract_code . _MEDLINE_UI_code . _PubMed_ID ? loop_ _Author_ordinal _Author_family_name _Author_given_name _Author_middle_initials _Author_family_title 1 Ryan Veronica H. . 2 Fawzi Nicolas L. . 3 Perdikari Therodora M. . 4 Naik Mandar T. . 5 Saueressig Camillo F. . 6 Lins Jeremy . . 7 Mittal Jeetain . . 8 Hart Anne C. . stop_ _Journal_abbreviation 'Not known' _Journal_volume . _Journal_issue . _Journal_CSD . _Book_chapter_title . _Book_volume . _Book_series . _Book_ISBN . _Conference_state_province . _Conference_abstract_number . _Page_first . _Page_last . _Year . _Details . save_ ################################## # Molecular system description # ################################## save_assembly_1 _Saveframe_category molecular_system _Mol_system_name assembly_1 _Enzyme_commission_number . loop_ _Mol_system_component_name _Mol_label 'hnRNPF PLD' $entity_1 stop_ _System_molecular_weight . _System_physical_state native _System_oligomer_state ? _System_paramagnetic no _System_thiol_state . _Database_query_date . _Details . save_ ######################## # Monomeric polymers # ######################## save_entity_1 _Saveframe_category monomeric_polymer _Mol_type polymer _Mol_polymer_class protein _Name_common 'hnRNPF PLD disordered monomer' _Molecular_mass . _Mol_thiol_state 'all free' _Details . ############################## # Polymer residue sequence # ############################## _Residue_count 51 _Mol_residue_sequence ; TGASNGAYSSQVMQGMGVSA AQATYSGLESQSVSGCYGAG YSGQNSMGGYD ; loop_ _Residue_seq_code _Residue_author_seq_code _Residue_label 1 365 THR 2 366 GLY 3 367 ALA 4 368 SER 5 369 ASN 6 370 GLY 7 371 ALA 8 372 TYR 9 373 SER 10 374 SER 11 375 GLN 12 376 VAL 13 377 MET 14 378 GLN 15 379 GLY 16 380 MET 17 381 GLY 18 382 VAL 19 383 SER 20 384 ALA 21 385 ALA 22 386 GLN 23 387 ALA 24 388 THR 25 389 TYR 26 390 SER 27 391 GLY 28 392 LEU 29 393 GLU 30 394 SER 31 395 GLN 32 396 SER 33 397 VAL 34 398 SER 35 399 GLY 36 400 CYS 37 401 TYR 38 402 GLY 39 403 ALA 40 404 GLY 41 405 TYR 42 406 SER 43 407 GLY 44 408 GLN 45 409 ASN 46 410 SER 47 411 MET 48 412 GLY 49 413 GLY 50 414 TYR 51 415 ASP stop_ _Sequence_homology_query_date . _Sequence_homology_query_revised_last_date . save_ #################### # Natural source # #################### save_natural_source_1 _Saveframe_category natural_source loop_ _Mol_label _Organism_name_common _NCBI_taxonomy_ID _Superkingdom _Kingdom _Genus _Species $entity_1 Human 9606 Eukaryota Metazoa Homo sapiens stop_ save_ ######################### # Experimental source # ######################### save_experimental_source_1 _Saveframe_category experimental_source loop_ _Mol_label _Production_method _Host_organism_name_common _Genus _Species _Strain _Vector_type _Vector_name $entity_1 'recombinant technology' . . . . plasmid pJ411 stop_ save_ ##################################### # Sample contents and methodology # ##################################### ######################## # Sample description # ######################## save_sample_1 _Saveframe_category sample _Sample_type solution _Details . loop_ _Mol_label _Concentration_value _Concentration_value_units _Isotopic_labeling $entity_1 150 uM '[U-99% 13C; U-99% 15N]' D2O 10 % [U-2H] MES 20 mM 'natural abundance' Bis-Tris 1 mM 'natural abundance' H2O 90 % 'natural abundance' DTT 1 mM 'natural abundance' stop_ save_ ############################ # Computer software used # ############################ save_software_1_NMRPipe _Saveframe_category software _Name NMRPipe _Version . loop_ _Vendor _Address _Electronic_address 'Delaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax' . . stop_ loop_ _Task 'data analysis' stop_ _Details . save_ save_software_2_SPARKY _Saveframe_category software _Name SPARKY _Version . loop_ _Vendor _Address _Electronic_address Goddard . . stop_ loop_ _Task 'chemical shift assignment' stop_ _Details . save_ ######################### # Experimental detail # ######################### ################################## # NMR Spectrometer definitions # ################################## save_NMR_spectrometer_1 _Saveframe_category NMR_spectrometer _Manufacturer Bruker _Model Avance _Field_strength 850 _Details 'TCI cryoprobe' save_ ############################# # NMR applied experiments # ############################# save_2D_1H-15N_HSQC_1 _Saveframe_category NMR_applied_experiment _Experiment_name '2D 1H-15N HSQC' _Sample_label $sample_1 save_ save_3D_HNCO_2 _Saveframe_category NMR_applied_experiment _Experiment_name '3D HNCO' _Sample_label $sample_1 save_ save_3D_HNCACO_3 _Saveframe_category NMR_applied_experiment _Experiment_name '3D HNCACO' _Sample_label $sample_1 save_ save_3D_HNCACB_4 _Saveframe_category NMR_applied_experiment _Experiment_name '3D HNCACB' _Sample_label $sample_1 save_ save_3D_CBCA(CO)NH_5 _Saveframe_category NMR_applied_experiment _Experiment_name '3D CBCA(CO)NH' _Sample_label $sample_1 save_ ####################### # Sample conditions # ####################### save_sample_conditions_1 _Saveframe_category sample_conditions _Details . loop_ _Variable_type _Variable_value _Variable_value_error _Variable_value_units 'ionic strength' 1 . M pH 5.5 . pH pressure 1 . atm temperature 298 . K stop_ save_ #################### # NMR parameters # #################### ############################## # Assigned chemical shifts # ############################## ################################ # Chemical shift referencing # ################################ save_chem_shift_reference_1 _Saveframe_category chemical_shift_reference _Details . loop_ _Mol_common_name _Atom_type _Atom_isotope_number _Atom_group _Chem_shift_units _Chem_shift_value _Reference_method _Reference_type _External_reference_sample_geometry _External_reference_location _External_reference_axis _Indirect_shift_ratio na C 13 protons ppm 0 na indirect . . . 1 DSS H 1 'methyl protons' ppm 0 internal direct . . . 1 na N 15 protons ppm 0 na indirect . . . 1 stop_ save_ ################################### # Assigned chemical shift lists # ################################### ################################################################### # Chemical Shift Ambiguity Index Value Definitions # # # # The values other than 1 are used for those atoms with different # # chemical shifts that cannot be assigned to stereospecific atoms # # or to specific residues or chains. # # # # Index Value Definition # # # # 1 Unique (including isolated methyl protons, # # geminal atoms, and geminal methyl # # groups with identical chemical shifts) # # (e.g. ILE HD11, HD12, HD13 protons) # # 2 Ambiguity of geminal atoms or geminal methyl # # proton groups (e.g. ASP HB2 and HB3 # # protons, LEU CD1 and CD2 carbons, or # # LEU HD11, HD12, HD13 and HD21, HD22, # # HD23 methyl protons) # # 3 Aromatic atoms on opposite sides of # # symmetrical rings (e.g. TYR HE1 and HE2 # # protons) # # 4 Intraresidue ambiguities (e.g. LYS HG and # # HD protons or TRP HZ2 and HZ3 protons) # # 5 Interresidue ambiguities (LYS 12 vs. LYS 27) # # 6 Intermolecular ambiguities (e.g. ASP 31 CA # # in monomer 1 and ASP 31 CA in monomer 2 # # of an asymmetrical homodimer, duplex # # DNA assignments, or other assignments # # that may apply to atoms in one or more # # molecule in the molecular assembly) # # 9 Ambiguous, specific ambiguity not defined # # # ################################################################### save_assigned_chemical_shifts_1 _Saveframe_category assigned_chemical_shifts _Details . loop_ _Experiment_label '2D 1H-15N HSQC' '3D HNCO' '3D HNCACO' '3D HNCACB' '3D CBCA(CO)NH' stop_ loop_ _Sample_label $sample_1 stop_ _Sample_conditions_label $sample_conditions_1 _Chem_shift_reference_set_label $chem_shift_reference_1 _Mol_system_component_name 'hnRNPF PLD' _Text_data_format . _Text_data . loop_ _Atom_shift_assign_ID _Residue_author_seq_code _Residue_seq_code _Residue_label _Atom_name _Atom_type _Chem_shift_value _Chem_shift_value_error _Chem_shift_ambiguity_code 1 365 1 THR H H 8.267 0 1 2 365 1 THR C C 174.906 0.01 1 3 365 1 THR CA C 62.013 0.01 1 4 365 1 THR CB C 69.861 0.02 1 5 365 1 THR N N 115.915 0.01 1 6 366 2 GLY H H 8.435 0 1 7 366 2 GLY C C 173.738 0.02 1 8 366 2 GLY CA C 45.285 0.07 1 9 366 2 GLY N N 111.42 0.01 1 10 367 3 ALA H H 8.182 0 1 11 367 3 ALA C C 177.962 0 1 12 367 3 ALA CA C 52.461 0.01 1 13 367 3 ALA CB C 19.443 0.04 1 14 367 3 ALA N N 123.734 0.01 1 15 368 4 SER H H 8.362 0 1 16 368 4 SER C C 174.467 0.01 1 17 368 4 SER CA C 58.37 0.04 1 18 368 4 SER CB C 63.761 0.04 1 19 368 4 SER N N 115.139 0.01 1 20 369 5 ASN H H 8.414 0 1 21 369 5 ASN C C 175.685 0 1 22 369 5 ASN CA C 53.346 0.02 1 23 369 5 ASN CB C 38.86 0.03 1 24 369 5 ASN N N 120.526 0 1 25 370 6 GLY H H 8.312 0 1 26 370 6 GLY C C 173.866 0.01 1 27 370 6 GLY CA C 45.475 0.01 1 28 370 6 GLY N N 109.085 0.01 1 29 371 7 ALA H H 8.048 0 1 30 371 7 ALA C C 177.516 0 1 31 371 7 ALA CA C 52.576 0.01 1 32 371 7 ALA CB C 19.101 0.01 1 33 371 7 ALA N N 123.522 0.01 1 34 372 8 TYR H H 8.118 0 1 35 372 8 TYR C C 175.951 0 1 36 372 8 TYR CA C 57.956 0.02 1 37 372 8 TYR CB C 38.689 0.01 1 38 372 8 TYR N N 119.151 0.01 1 39 373 9 SER H H 8.079 0 1 40 373 9 SER C C 174.45 0.01 1 41 373 9 SER CA C 58.181 0.01 1 42 373 9 SER CB C 63.943 0.01 1 43 373 9 SER N N 117.06 0.01 1 44 374 10 SER H H 8.292 0 1 45 374 10 SER C C 174.629 0.01 1 46 374 10 SER CA C 58.81 0.02 1 47 374 10 SER CB C 63.699 0 1 48 374 10 SER N N 117.728 0.01 1 49 375 11 GLN H H 8.293 0 1 50 375 11 GLN C C 176.122 0.05 1 51 375 11 GLN CA C 56.344 0.03 1 52 375 11 GLN CB C 29.315 0.01 1 53 375 11 GLN N N 121.745 0 1 54 376 12 VAL H H 8.016 0 1 55 376 12 VAL C C 176.367 0 1 56 376 12 VAL CA C 62.842 0.03 1 57 376 12 VAL CB C 32.502 0.02 1 58 376 12 VAL N N 120.804 0.01 1 59 377 13 MET H H 8.325 0 1 60 377 13 MET C C 176.199 0 1 61 377 13 MET CA C 55.576 0.04 1 62 377 13 MET CB C 32.662 0.02 1 63 377 13 MET N N 123.472 0.01 1 64 378 14 GLN H H 8.324 0 1 65 378 14 GLN C C 176.441 0.01 1 66 378 14 GLN CA C 56.285 0.03 1 67 378 14 GLN CB C 29.351 0.02 1 68 378 14 GLN N N 121.359 0.01 1 69 379 15 GLY H H 8.4 0 1 70 379 15 GLY C C 174.208 0 1 71 379 15 GLY CA C 45.381 0.03 1 72 379 15 GLY N N 109.876 0.01 1 73 380 16 MET H H 8.186 0 1 74 380 16 MET C C 176.771 0.01 1 75 380 16 MET CA C 55.59 0.05 1 76 380 16 MET CB C 32.879 0.02 1 77 380 16 MET N N 119.453 0.02 1 78 381 17 GLY H H 8.437 0 1 79 381 17 GLY C C 174.106 0 1 80 381 17 GLY CA C 45.382 0.02 1 81 381 17 GLY N N 109.961 0.01 1 82 382 18 VAL H H 7.956 0 1 83 382 18 VAL C C 176.368 0 1 84 382 18 VAL CA C 62.307 0.05 1 85 382 18 VAL CB C 32.777 0.02 1 86 382 18 VAL N N 118.98 0 1 87 383 19 SER H H 8.381 0 1 88 383 19 SER C C 174.41 0 1 89 383 19 SER CA C 58.262 0.02 1 90 383 19 SER CB C 63.915 0.03 1 91 383 19 SER N N 119.342 0.01 1 92 384 20 ALA H H 8.323 0 1 93 384 20 ALA C C 177.651 0.01 1 94 384 20 ALA CA C 52.778 0.02 1 95 384 20 ALA CB C 19.107 0.01 1 96 384 20 ALA N N 126.14 0.02 1 97 385 21 ALA H H 8.176 0 1 98 385 21 ALA C C 177.854 0.01 1 99 385 21 ALA CA C 52.771 0.03 1 100 385 21 ALA CB C 19.013 0.01 1 101 385 21 ALA N N 122.551 0.01 1 102 386 22 GLN H H 8.147 0 1 103 386 22 GLN C C 175.816 0 1 104 386 22 GLN CA C 55.852 0.02 1 105 386 22 GLN CB C 29.456 0.02 1 106 386 22 GLN N N 119.017 0.01 1 107 387 23 ALA H H 8.242 0 1 108 387 23 ALA C C 177.713 0.01 1 109 387 23 ALA CA C 52.752 0.04 1 110 387 23 ALA CB C 19.228 0.01 1 111 387 23 ALA N N 124.994 0.01 1 112 388 24 THR H H 7.989 0 1 113 388 24 THR C C 174.153 0 1 114 388 24 THR CA C 61.911 0.03 1 115 388 24 THR CB C 69.952 0.03 1 116 388 24 THR N N 112.984 0.01 1 117 389 25 TYR H H 8.179 0 1 118 389 25 TYR C C 175.782 0 1 119 389 25 TYR CA C 57.899 0.02 1 120 389 25 TYR CB C 38.867 0.02 1 121 389 25 TYR N N 122.558 0.01 1 122 390 26 SER H H 8.361 0 1 123 390 26 SER C C 174.773 0 1 124 390 26 SER CA C 58.263 0.02 1 125 390 26 SER CB C 64.001 0 1 126 390 26 SER N N 118.407 0.01 1 127 391 27 GLY H H 7.917 0 1 128 391 27 GLY C C 174.123 0 1 129 391 27 GLY CA C 45.401 0.01 1 130 391 27 GLY N N 110.545 0.01 1 131 392 28 LEU H H 8.06 0 1 132 392 28 LEU C C 177.841 0 1 133 392 28 LEU CA C 55.453 0.03 1 134 392 28 LEU CB C 42.402 0.03 1 135 392 28 LEU N N 121.25 0.01 1 136 393 29 GLU H H 8.556 0 1 137 393 29 GLU C C 176.786 0.01 1 138 393 29 GLU CA C 57.157 0.03 1 139 393 29 GLU CB C 29.755 0 1 140 393 29 GLU N N 121.28 0.01 1 141 394 30 SER H H 8.229 0 1 142 394 30 SER C C 174.667 0 1 143 394 30 SER CA C 58.682 0.02 1 144 394 30 SER CB C 63.651 0.01 1 145 394 30 SER N N 116.019 0.01 1 146 395 31 GLN H H 8.291 0 1 147 395 31 GLN C C 176.069 0.05 1 148 395 31 GLN CA C 56.056 0.04 1 149 395 31 GLN CB C 29.327 0.01 1 150 395 31 GLN N N 121.794 0.02 1 151 396 32 SER H H 8.254 0 1 152 396 32 SER C C 174.691 0.01 1 153 396 32 SER CA C 58.465 0.06 1 154 396 32 SER CB C 63.789 0.02 1 155 396 32 SER N N 116.598 0.01 1 156 397 33 VAL H H 8.119 0 1 157 397 33 VAL C C 176.284 0.01 1 158 397 33 VAL CA C 62.464 0.06 1 159 397 33 VAL CB C 32.658 0.01 1 160 397 33 VAL N N 121.298 0.01 1 161 398 34 SER H H 8.303 0 1 162 398 34 SER C C 175.077 0 1 163 398 34 SER CA C 58.592 0.02 1 164 398 34 SER CB C 63.833 0.03 1 165 398 34 SER N N 118.475 0.01 1 166 399 35 GLY H H 8.302 0 1 167 399 35 GLY C C 173.963 0.01 1 168 399 35 GLY CA C 45.415 0.02 1 169 399 35 GLY N N 110.654 0.01 1 170 400 36 CYS H H 8.031 0 1 171 400 36 CYS C C 174.236 0 1 172 400 36 CYS CA C 58.37 0.04 1 173 400 36 CYS CB C 27.895 0.01 1 174 400 36 CYS N N 118.484 0.01 1 175 401 37 TYR H H 8.227 0 1 176 401 37 TYR C C 176.22 0 1 177 401 37 TYR CA C 57.979 0.05 1 178 401 37 TYR CB C 38.682 0 1 179 401 37 TYR N N 122.375 0.01 1 180 402 38 GLY H H 8.232 0 1 181 402 38 GLY C C 173.809 0.02 1 182 402 38 GLY CA C 45.094 0.04 1 183 402 38 GLY N N 110.462 0.01 1 184 403 39 ALA H H 8.18 0 1 185 403 39 ALA C C 178.281 0 1 186 403 39 ALA CA C 52.815 0.02 1 187 403 39 ALA CB C 19.094 0.02 1 188 403 39 ALA N N 123.737 0 1 189 404 40 GLY H H 8.374 0 1 190 404 40 GLY C C 173.952 0 1 191 404 40 GLY CA C 45.197 0 1 192 404 40 GLY N N 107.962 0.01 1 193 405 41 TYR H H 7.973 0 1 194 405 41 TYR C C 176.001 0.01 1 195 405 41 TYR CA C 58.104 0.01 1 196 405 41 TYR CB C 38.914 0.01 1 197 405 41 TYR N N 120.312 0.01 1 198 406 42 SER H H 8.307 0 1 199 406 42 SER C C 174.72 0 1 200 406 42 SER CA C 58.196 0.01 1 201 406 42 SER CB C 63.954 0.06 1 202 406 42 SER N N 118.449 0.01 1 203 407 43 GLY H H 7.725 0 1 204 407 43 GLY C C 173.948 0 1 205 407 43 GLY CA C 45.337 0.01 1 206 407 43 GLY N N 110.065 0.01 1 207 408 44 GLN H H 8.179 0 1 208 408 44 GLN C C 175.926 0 1 209 408 44 GLN CA C 56.026 0.02 1 210 408 44 GLN CB C 29.45 0.01 1 211 408 44 GLN N N 119.524 0.01 1 212 409 45 ASN H H 8.507 0 1 213 409 45 ASN C C 175.498 0 1 214 409 45 ASN CA C 53.162 0.04 1 215 409 45 ASN CB C 38.875 0 1 216 409 45 ASN N N 119.792 0.01 1 217 410 46 SER H H 8.322 0 1 218 410 46 SER C C 174.759 0 1 219 410 46 SER CA C 58.953 0.04 1 220 410 46 SER CB C 63.637 0.01 1 221 410 46 SER N N 116.038 0.01 1 222 411 47 MET H H 8.36 0 1 223 411 47 MET C C 176.686 0 1 224 411 47 MET CA C 55.516 0.01 1 225 411 47 MET CB C 32.545 0.04 1 226 411 47 MET N N 121.48 0.01 1 227 412 48 GLY H H 8.254 0 1 228 412 48 GLY C C 174.196 0 1 229 412 48 GLY CA C 45.37 0.01 1 230 412 48 GLY N N 109.414 0.01 1 231 413 49 GLY H H 8.086 0 1 232 413 49 GLY C C 173.54 0 1 233 413 49 GLY CA C 44.978 0.04 1 234 413 49 GLY N N 108.443 0 1 235 414 50 TYR H H 8.046 0 1 236 414 50 TYR C C 174.785 0 1 237 414 50 TYR CA C 57.6 0.02 1 238 414 50 TYR CB C 39.025 0 1 239 414 50 TYR N N 119.342 0.01 1 240 415 51 ASP H H 7.999 0 1 241 415 51 ASP C C 173.963 0 1 242 415 51 ASP CA C 55.601 0 1 243 415 51 ASP CB C 41.976 0 1 244 415 51 ASP N N 126.245 0.01 1 stop_ save_