data_16417 ####################### # Entry information # ####################### save_entry_information _Entry.Sf_category entry_information _Entry.Sf_framecode entry_information _Entry.ID 16417 _Entry.Title ; An Atomic Resolution Model for Assembly, Architecture, and Function of the Dr Adhesins ; _Entry.Type macromolecule _Entry.Version_type original _Entry.Submission_date 2009-07-23 _Entry.Accession_date 2009-07-23 _Entry.Last_release_date 2010-03-08 _Entry.Original_release_date 2010-03-08 _Entry.Origination author _Entry.NMR_STAR_version 3.1.1.61 _Entry.Original_NMR_STAR_version 3.0.9.13 _Entry.Experimental_method NMR _Entry.Experimental_method_subtype solution _Entry.Details . _Entry.BMRB_internal_directory_name . loop_ _Entry_author.Ordinal _Entry_author.Given_name _Entry_author.Family_name _Entry_author.First_initial _Entry_author.Middle_initials _Entry_author.Family_title _Entry_author.Entry_ID 1 Kirstine Anderson . L. . 16417 2 Jason Billington . . . 16417 3 David Pettigrew . . . 16417 4 Ernesto Cota . . . 16417 5 Peter Simpson . . . 16417 6 Pietro Roversi . . . 16417 7 'Ho An' Chen . . . 16417 8 Petri Urvil . . . 16417 9 Laurence 'du Merle' . . . 16417 10 Peter Barlow . N. . 16417 11 M. Medof . E. . 16417 12 Richard Smith . A.G. . 16417 13 Bogdan Nowicki . . . 16417 14 Chantal 'Le Bouguenec' . . . 16417 15 Susan Lea . M. . 16417 16 Stephen Matthews . . . 16417 stop_ loop_ _Data_set.Type _Data_set.Count _Data_set.Entry_ID binding_constants 1 16417 stop_ loop_ _Datum.Type _Datum.Count _Datum.Entry_ID 'binding constants' 4 16417 stop_ loop_ _Release.Release_number _Release.Format_type _Release.Format_version _Release.Date _Release.Submission_date _Release.Type _Release.Author _Release.Detail _Release.Entry_ID 1 . . 2010-03-08 2009-07-23 original author . 16417 stop_ save_ ############### # Citations # ############### save_entry_citation _Citation.Sf_category citations _Citation.Sf_framecode entry_citation _Citation.Entry_ID 16417 _Citation.ID 1 _Citation.Class 'entry citation' _Citation.CAS_abstract_code . _Citation.MEDLINE_UI_code . _Citation.DOI . _Citation.PubMed_ID 15327779 _Citation.Full_citation . _Citation.Title 'An Atomic Resolution Model for Assembly, Architecture, and Function of the Dr Adhsins' _Citation.Status published _Citation.Type journal _Citation.Journal_abbrev 'Mol. Cell' _Citation.Journal_name_full 'Molecular Cell' _Citation.Journal_volume 15 _Citation.Journal_issue . _Citation.Journal_ASTM . _Citation.Journal_ISSN . _Citation.Journal_CSD . _Citation.Book_title . _Citation.Book_chapter_title . _Citation.Book_volume . _Citation.Book_series . _Citation.Book_publisher . _Citation.Book_publisher_city . _Citation.Book_ISBN . _Citation.Conference_title . _Citation.Conference_site . _Citation.Conference_state_province . _Citation.Conference_country . _Citation.Conference_start_date . _Citation.Conference_end_date . _Citation.Conference_abstract_number . _Citation.Thesis_institution . _Citation.Thesis_institution_city . _Citation.Thesis_institution_country . _Citation.WWW_URL . _Citation.Page_first 647 _Citation.Page_last 657 _Citation.Year 2004 _Citation.Details . loop_ _Citation_author.Ordinal _Citation_author.Given_name _Citation_author.Family_name _Citation_author.First_initial _Citation_author.Middle_initials _Citation_author.Family_title _Citation_author.Entry_ID _Citation_author.Citation_ID 1 Kirstine Anderson . L. . 16417 1 2 Jason Billington . . . 16417 1 3 David Pettigrew . . . 16417 1 4 Ernesto Cota . . . 16417 1 5 Petri Urvil . . . 16417 1 6 Peter Simpson . . . 16417 1 7 Pietro Roversi . . . 16417 1 8 'Ho An' Chen . . . 16417 1 9 Laurence 'du Merle' . . . 16417 1 10 Paul Barlow . N. . 16417 1 11 M. Medof . E. . 16417 1 12 Richard Smith . A.G. . 16417 1 13 Bogdan Nowicki . . . 16417 1 14 Chantal 'Le Bouguenec' . . . 16417 1 15 Susan Lea . M. . 16417 1 16 Stephen Matthews . . . 16417 1 stop_ save_ ############################################# # Molecular system (assembly) description # ############################################# save_assembly _Assembly.Sf_category assembly _Assembly.Sf_framecode assembly _Assembly.Entry_ID 16417 _Assembly.ID 1 _Assembly.Name 'AfaE-dsc_DAF1234 complex' _Assembly.BMRB_code . _Assembly.Number_of_components 2 _Assembly.Organic_ligands . _Assembly.Metal_ions . _Assembly.Non_standard_bonds no _Assembly.Ambiguous_conformational_states . _Assembly.Ambiguous_chem_comp_sites . _Assembly.Molecules_in_chemical_exchange . _Assembly.Paramagnetic no _Assembly.Thiol_state . _Assembly.Molecular_mass . _Assembly.Enzyme_commission_number . _Assembly.Details . _Assembly.DB_query_date . _Assembly.DB_query_revised_last_date . loop_ _Entity_assembly.ID _Entity_assembly.Entity_assembly_name _Entity_assembly.Entity_ID _Entity_assembly.Entity_label _Entity_assembly.Asym_ID _Entity_assembly.PDB_chain_ID _Entity_assembly.Experimental_data_reported _Entity_assembly.Physical_state _Entity_assembly.Conformational_isomer _Entity_assembly.Chemical_exchange_state _Entity_assembly.Magnetic_equivalence_group_code _Entity_assembly.Role _Entity_assembly.Details _Entity_assembly.Entry_ID _Entity_assembly.Assembly_ID 1 AfaE-dsc 1 $AfaE-dsc A . yes native no no . . . 16417 1 2 DAF1234 2 $DAF1234 B . yes native no no . . . 16417 1 stop_ save_ #################################### # Biological polymers and ligands # #################################### save_AfaE-dsc _Entity.Sf_category entity _Entity.Sf_framecode AfaE-dsc _Entity.Entry_ID 16417 _Entity.ID 1 _Entity.BMRB_code . _Entity.Name AfaE-dsc _Entity.Type polymer _Entity.Polymer_common_type . _Entity.Polymer_type polypeptide(L) _Entity.Polymer_type_details . _Entity.Polymer_strand_ID . _Entity.Polymer_seq_one_letter_code_can . _Entity.Polymer_seq_one_letter_code ; EECQVRVGDLTVAKTRGQLT DAAPIGPVTVQALGCNARQV ALKADTDNFEQGKFFLISDN NRDKLYVNIRPMDNSAWTTD NGVFYKNDVGSWGGTIGIYV DGQQTNTPPGNYTLTLTGGY WAKDNKQGFTPSGTTGTTKL TVT ; _Entity.Target_identifier . _Entity.Polymer_author_defined_seq . _Entity.Polymer_author_seq_details . _Entity.Ambiguous_conformational_states no _Entity.Ambiguous_chem_comp_sites no _Entity.Nstd_monomer no _Entity.Nstd_chirality no _Entity.Nstd_linkage no _Entity.Nonpolymer_comp_ID . _Entity.Nonpolymer_comp_label . _Entity.Number_of_monomers 143 _Entity.Number_of_nonpolymer_components . _Entity.Paramagnetic no _Entity.Thiol_state 'not reported' _Entity.Src_method . _Entity.Parent_entity_ID . _Entity.Fragment . _Entity.Mutation . _Entity.EC_number . _Entity.Calc_isoelectric_point . _Entity.Formula_weight . _Entity.Formula_weight_exptl . _Entity.Formula_weight_exptl_meth . _Entity.Details . _Entity.DB_query_date . _Entity.DB_query_revised_last_date 2015-11-25 loop_ _Entity_db_link.Ordinal _Entity_db_link.Author_supplied _Entity_db_link.Database_code _Entity_db_link.Accession_code _Entity_db_link.Entry_mol_code _Entity_db_link.Entry_mol_name _Entity_db_link.Entry_experimental_method _Entity_db_link.Entry_structure_resolution _Entity_db_link.Entry_relation_type _Entity_db_link.Entry_details _Entity_db_link.Chimera_segment_ID _Entity_db_link.Seq_query_to_submitted_percent _Entity_db_link.Seq_subject_length _Entity_db_link.Seq_identity _Entity_db_link.Seq_positive _Entity_db_link.Seq_homology_expectation_val _Entity_db_link.Seq_align_begin _Entity_db_link.Seq_align_end _Entity_db_link.Seq_difference_details _Entity_db_link.Seq_alignment_details _Entity_db_link.Entry_ID _Entity_db_link.Entity_ID 1 no PDB 1RXL . "Solution Structure Of The Engineered Protein Afae-Dsc" . . . . . 100.00 156 100.00 100.00 1.33e-98 . . . . 16417 1 2 no PDB 1USZ . "Semet Afae-3 Adhesin From Escherichia Coli" . . . . . 86.01 149 99.19 99.19 1.62e-83 . . . . 16417 1 3 no PDB 1UT2 . "Afae-3 Adhesin From Escherichia Coli" . . . . . 86.01 149 100.00 100.00 1.23e-84 . . . . 16417 1 4 no PDB 2IXQ . "The Solution Structure Of The Invasive Tip Complex From Afa-Dr Fibrils" . . . . . 100.00 143 100.00 100.00 5.11e-98 . . . . 16417 1 5 no PDB 2VER . "Structural Model For The Complex Between The Dr Adhesins And Carcinoembryonic Antigen (Cea)" . . . . . 100.00 143 100.00 100.00 5.11e-98 . . . . 16417 1 6 no EMBL CAA48847 . "AFA-III adhesin [Escherichia coli]" . . . . . 86.01 160 100.00 100.00 4.43e-85 . . . . 16417 1 7 no EMBL CAA54121 . "afaE-3 [Escherichia coli]" . . . . . 86.01 160 100.00 100.00 4.43e-85 . . . . 16417 1 8 no GB AAA23709 . "Dr hemagglutinin structural subunit [Escherichia coli]" . . . . . 86.01 160 97.56 98.37 2.04e-82 . . . . 16417 1 9 no GB AAK16480 . "DraE [Escherichia coli]" . . . . . 86.01 160 97.56 98.37 2.04e-82 . . . . 16417 1 10 no GB ABD93399 . "Dr adhesin [Escherichia coli]" . . . . . 86.01 160 97.56 98.37 1.52e-82 . . . . 16417 1 11 no GB ABD93405 . "Dr adhesin [Escherichia coli]" . . . . . 86.01 160 97.56 98.37 4.87e-82 . . . . 16417 1 12 no GB ABD93406 . "Dr adhesin [Escherichia coli]" . . . . . 86.01 160 97.56 98.37 2.04e-82 . . . . 16417 1 13 no REF WP_021517429 . "Dr hemagglutinin structural subunit [Escherichia coli]" . . . . . 86.01 160 98.37 99.19 1.11e-83 . . . . 16417 1 14 no REF WP_021523428 . "afimbrial adhesin AFA-I [Escherichia coli]" . . . . . 86.01 160 97.56 99.19 2.37e-83 . . . . 16417 1 15 no REF WP_021566292 . "Dr hemagglutinin structural subunit [Escherichia coli]" . . . . . 86.01 160 98.37 99.19 3.84e-83 . . . . 16417 1 16 no SP P24093 . "RecName: Full=Dr hemagglutinin structural subunit; Flags: Precursor" . . . . . 86.01 160 97.56 98.37 2.04e-82 . . . . 16417 1 17 no SP Q57254 . "RecName: Full=Afimbrial adhesin AFA-III; Flags: Precursor" . . . . . 86.01 160 100.00 100.00 4.43e-85 . . . . 16417 1 stop_ loop_ _Entity_comp_index.ID _Entity_comp_index.Auth_seq_ID _Entity_comp_index.Comp_ID _Entity_comp_index.Comp_label _Entity_comp_index.Entry_ID _Entity_comp_index.Entity_ID 1 . GLU . 16417 1 2 . GLU . 16417 1 3 . CYS . 16417 1 4 . GLN . 16417 1 5 . VAL . 16417 1 6 . ARG . 16417 1 7 . VAL . 16417 1 8 . GLY . 16417 1 9 . ASP . 16417 1 10 . LEU . 16417 1 11 . THR . 16417 1 12 . VAL . 16417 1 13 . ALA . 16417 1 14 . LYS . 16417 1 15 . THR . 16417 1 16 . ARG . 16417 1 17 . GLY . 16417 1 18 . GLN . 16417 1 19 . LEU . 16417 1 20 . THR . 16417 1 21 . ASP . 16417 1 22 . ALA . 16417 1 23 . ALA . 16417 1 24 . PRO . 16417 1 25 . ILE . 16417 1 26 . GLY . 16417 1 27 . PRO . 16417 1 28 . VAL . 16417 1 29 . THR . 16417 1 30 . VAL . 16417 1 31 . GLN . 16417 1 32 . ALA . 16417 1 33 . LEU . 16417 1 34 . GLY . 16417 1 35 . CYS . 16417 1 36 . ASN . 16417 1 37 . ALA . 16417 1 38 . ARG . 16417 1 39 . GLN . 16417 1 40 . VAL . 16417 1 41 . ALA . 16417 1 42 . LEU . 16417 1 43 . LYS . 16417 1 44 . ALA . 16417 1 45 . ASP . 16417 1 46 . THR . 16417 1 47 . ASP . 16417 1 48 . ASN . 16417 1 49 . PHE . 16417 1 50 . GLU . 16417 1 51 . GLN . 16417 1 52 . GLY . 16417 1 53 . LYS . 16417 1 54 . PHE . 16417 1 55 . PHE . 16417 1 56 . LEU . 16417 1 57 . ILE . 16417 1 58 . SER . 16417 1 59 . ASP . 16417 1 60 . ASN . 16417 1 61 . ASN . 16417 1 62 . ARG . 16417 1 63 . ASP . 16417 1 64 . LYS . 16417 1 65 . LEU . 16417 1 66 . TYR . 16417 1 67 . VAL . 16417 1 68 . ASN . 16417 1 69 . ILE . 16417 1 70 . ARG . 16417 1 71 . PRO . 16417 1 72 . MET . 16417 1 73 . ASP . 16417 1 74 . ASN . 16417 1 75 . SER . 16417 1 76 . ALA . 16417 1 77 . TRP . 16417 1 78 . THR . 16417 1 79 . THR . 16417 1 80 . ASP . 16417 1 81 . ASN . 16417 1 82 . GLY . 16417 1 83 . VAL . 16417 1 84 . PHE . 16417 1 85 . TYR . 16417 1 86 . LYS . 16417 1 87 . ASN . 16417 1 88 . ASP . 16417 1 89 . VAL . 16417 1 90 . GLY . 16417 1 91 . SER . 16417 1 92 . TRP . 16417 1 93 . GLY . 16417 1 94 . GLY . 16417 1 95 . THR . 16417 1 96 . ILE . 16417 1 97 . GLY . 16417 1 98 . ILE . 16417 1 99 . TYR . 16417 1 100 . VAL . 16417 1 101 . ASP . 16417 1 102 . GLY . 16417 1 103 . GLN . 16417 1 104 . GLN . 16417 1 105 . THR . 16417 1 106 . ASN . 16417 1 107 . THR . 16417 1 108 . PRO . 16417 1 109 . PRO . 16417 1 110 . GLY . 16417 1 111 . ASN . 16417 1 112 . TYR . 16417 1 113 . THR . 16417 1 114 . LEU . 16417 1 115 . THR . 16417 1 116 . LEU . 16417 1 117 . THR . 16417 1 118 . GLY . 16417 1 119 . GLY . 16417 1 120 . TYR . 16417 1 121 . TRP . 16417 1 122 . ALA . 16417 1 123 . LYS . 16417 1 124 . ASP . 16417 1 125 . ASN . 16417 1 126 . LYS . 16417 1 127 . GLN . 16417 1 128 . GLY . 16417 1 129 . PHE . 16417 1 130 . THR . 16417 1 131 . PRO . 16417 1 132 . SER . 16417 1 133 . GLY . 16417 1 134 . THR . 16417 1 135 . THR . 16417 1 136 . GLY . 16417 1 137 . THR . 16417 1 138 . THR . 16417 1 139 . LYS . 16417 1 140 . LEU . 16417 1 141 . THR . 16417 1 142 . VAL . 16417 1 143 . THR . 16417 1 stop_ loop_ _Entity_poly_seq.Hetero _Entity_poly_seq.Mon_ID _Entity_poly_seq.Num _Entity_poly_seq.Comp_index_ID _Entity_poly_seq.Entry_ID _Entity_poly_seq.Entity_ID . GLU 1 1 16417 1 . GLU 2 2 16417 1 . CYS 3 3 16417 1 . GLN 4 4 16417 1 . VAL 5 5 16417 1 . ARG 6 6 16417 1 . VAL 7 7 16417 1 . GLY 8 8 16417 1 . ASP 9 9 16417 1 . LEU 10 10 16417 1 . THR 11 11 16417 1 . VAL 12 12 16417 1 . ALA 13 13 16417 1 . LYS 14 14 16417 1 . THR 15 15 16417 1 . ARG 16 16 16417 1 . GLY 17 17 16417 1 . GLN 18 18 16417 1 . LEU 19 19 16417 1 . THR 20 20 16417 1 . ASP 21 21 16417 1 . ALA 22 22 16417 1 . ALA 23 23 16417 1 . PRO 24 24 16417 1 . ILE 25 25 16417 1 . GLY 26 26 16417 1 . PRO 27 27 16417 1 . VAL 28 28 16417 1 . THR 29 29 16417 1 . VAL 30 30 16417 1 . GLN 31 31 16417 1 . ALA 32 32 16417 1 . LEU 33 33 16417 1 . GLY 34 34 16417 1 . CYS 35 35 16417 1 . ASN 36 36 16417 1 . ALA 37 37 16417 1 . ARG 38 38 16417 1 . GLN 39 39 16417 1 . VAL 40 40 16417 1 . ALA 41 41 16417 1 . LEU 42 42 16417 1 . LYS 43 43 16417 1 . ALA 44 44 16417 1 . ASP 45 45 16417 1 . THR 46 46 16417 1 . ASP 47 47 16417 1 . ASN 48 48 16417 1 . PHE 49 49 16417 1 . GLU 50 50 16417 1 . GLN 51 51 16417 1 . GLY 52 52 16417 1 . LYS 53 53 16417 1 . PHE 54 54 16417 1 . PHE 55 55 16417 1 . LEU 56 56 16417 1 . ILE 57 57 16417 1 . SER 58 58 16417 1 . ASP 59 59 16417 1 . ASN 60 60 16417 1 . ASN 61 61 16417 1 . ARG 62 62 16417 1 . ASP 63 63 16417 1 . LYS 64 64 16417 1 . LEU 65 65 16417 1 . TYR 66 66 16417 1 . VAL 67 67 16417 1 . ASN 68 68 16417 1 . ILE 69 69 16417 1 . ARG 70 70 16417 1 . PRO 71 71 16417 1 . MET 72 72 16417 1 . ASP 73 73 16417 1 . ASN 74 74 16417 1 . SER 75 75 16417 1 . ALA 76 76 16417 1 . TRP 77 77 16417 1 . THR 78 78 16417 1 . THR 79 79 16417 1 . ASP 80 80 16417 1 . ASN 81 81 16417 1 . GLY 82 82 16417 1 . VAL 83 83 16417 1 . PHE 84 84 16417 1 . TYR 85 85 16417 1 . LYS 86 86 16417 1 . ASN 87 87 16417 1 . ASP 88 88 16417 1 . VAL 89 89 16417 1 . GLY 90 90 16417 1 . SER 91 91 16417 1 . TRP 92 92 16417 1 . GLY 93 93 16417 1 . GLY 94 94 16417 1 . THR 95 95 16417 1 . ILE 96 96 16417 1 . GLY 97 97 16417 1 . ILE 98 98 16417 1 . TYR 99 99 16417 1 . VAL 100 100 16417 1 . ASP 101 101 16417 1 . GLY 102 102 16417 1 . GLN 103 103 16417 1 . GLN 104 104 16417 1 . THR 105 105 16417 1 . ASN 106 106 16417 1 . THR 107 107 16417 1 . PRO 108 108 16417 1 . PRO 109 109 16417 1 . GLY 110 110 16417 1 . ASN 111 111 16417 1 . TYR 112 112 16417 1 . THR 113 113 16417 1 . LEU 114 114 16417 1 . THR 115 115 16417 1 . LEU 116 116 16417 1 . THR 117 117 16417 1 . GLY 118 118 16417 1 . GLY 119 119 16417 1 . TYR 120 120 16417 1 . TRP 121 121 16417 1 . ALA 122 122 16417 1 . LYS 123 123 16417 1 . ASP 124 124 16417 1 . ASN 125 125 16417 1 . LYS 126 126 16417 1 . GLN 127 127 16417 1 . GLY 128 128 16417 1 . PHE 129 129 16417 1 . THR 130 130 16417 1 . PRO 131 131 16417 1 . SER 132 132 16417 1 . GLY 133 133 16417 1 . THR 134 134 16417 1 . THR 135 135 16417 1 . GLY 136 136 16417 1 . THR 137 137 16417 1 . THR 138 138 16417 1 . LYS 139 139 16417 1 . LEU 140 140 16417 1 . THR 141 141 16417 1 . VAL 142 142 16417 1 . THR 143 143 16417 1 stop_ save_ save_DAF1234 _Entity.Sf_category entity _Entity.Sf_framecode DAF1234 _Entity.Entry_ID 16417 _Entity.ID 2 _Entity.BMRB_code . _Entity.Name DAF1234 _Entity.Type polymer _Entity.Polymer_common_type . _Entity.Polymer_type polypeptide(L) _Entity.Polymer_type_details . _Entity.Polymer_strand_ID . _Entity.Polymer_seq_one_letter_code_can . _Entity.Polymer_seq_one_letter_code ; MQDCGLPPDVPNAQPALEGR TSFPEDTVITYKCEESFVKI PGEKDSVICLKGSQWSDIEE FCNRSCEVPTRLNSASLKQP YITQNYFPVGTVVEYECRPG YRREPSLSPKLTCLQNLKWS TAVEFCKKKSCPNPGEIRNG QIDVPGGILFGATISFSCNT GYKLFGSTSSFCLISGSSVQ WSDPLPECREIYCPAPPQID NGIIQGERDHYGYRQSVTYA CNKGFTMIGEHSIYCTVNND EGEWSGPPPECRGC ; _Entity.Target_identifier . _Entity.Polymer_author_defined_seq . _Entity.Polymer_author_seq_details . _Entity.Ambiguous_conformational_states no _Entity.Ambiguous_chem_comp_sites no _Entity.Nstd_monomer no _Entity.Nstd_chirality no _Entity.Nstd_linkage no _Entity.Nonpolymer_comp_ID . _Entity.Nonpolymer_comp_label . _Entity.Number_of_monomers 254 _Entity.Number_of_nonpolymer_components . _Entity.Paramagnetic no _Entity.Thiol_state 'not reported' _Entity.Src_method . _Entity.Parent_entity_ID . _Entity.Fragment . _Entity.Mutation . _Entity.EC_number . _Entity.Calc_isoelectric_point . _Entity.Formula_weight 70000 _Entity.Formula_weight_exptl . _Entity.Formula_weight_exptl_meth . _Entity.Details . _Entity.DB_query_date . _Entity.DB_query_revised_last_date 2015-01-30 loop_ _Entity_db_link.Ordinal _Entity_db_link.Author_supplied _Entity_db_link.Database_code _Entity_db_link.Accession_code _Entity_db_link.Entry_mol_code _Entity_db_link.Entry_mol_name _Entity_db_link.Entry_experimental_method _Entity_db_link.Entry_structure_resolution _Entity_db_link.Entry_relation_type _Entity_db_link.Entry_details _Entity_db_link.Chimera_segment_ID _Entity_db_link.Seq_query_to_submitted_percent _Entity_db_link.Seq_subject_length _Entity_db_link.Seq_identity _Entity_db_link.Seq_positive _Entity_db_link.Seq_homology_expectation_val _Entity_db_link.Seq_align_begin _Entity_db_link.Seq_align_end _Entity_db_link.Seq_difference_details _Entity_db_link.Seq_alignment_details _Entity_db_link.Entry_ID _Entity_db_link.Entity_ID 1 no PDB 1OJV . "Decay Accelerating Factor (Cd55): The Structure Of An Intact Human Complement Regulator." . . . . . 100.00 254 100.00 100.00 0.00e+00 . . . . 16417 2 2 no PDB 1OJW . "Decay Accelerating Factor (Cd55): The Structure Of An Intact Human Complement Regulator." . . . . . 100.00 254 100.00 100.00 0.00e+00 . . . . 16417 2 3 no PDB 1OJY . "Decay Accelerating Factor (Cd55): The Structure Of An Intact Human Complement Regulator." . . . . . 100.00 254 100.00 100.00 0.00e+00 . . . . 16417 2 4 no PDB 1OK1 . "Decay Accelerating Factor (cd55): The Structure Of An Intact Human Complement Regulator." . . . . . 100.00 254 100.00 100.00 0.00e+00 . . . . 16417 2 5 no PDB 1OK2 . "Decay Accelerating Factor (Cd55): The Structure Of An Intact Human Complement Regulator." . . . . . 100.00 254 100.00 100.00 0.00e+00 . . . . 16417 2 6 no PDB 1OK3 . "Decay Accelerating Factor (cd55): The Structure Of An Intact Human Complement Regulator" . . . . . 99.61 254 99.60 99.60 0.00e+00 . . . . 16417 2 7 no PDB 1OK9 . "Decay Accelerating Factor (Cd55): The Structure Of An Intact Human Complement Regulator." . . . . . 100.00 254 100.00 100.00 0.00e+00 . . . . 16417 2 8 no PDB 2C8I . "Complex Of Echovirus Type 12 With Domains 1, 2, 3 And 4 Of Its Receptor Decay Accelerating Factor (Cd55) By Cryo Electron Micro" . . . . . 99.21 316 100.00 100.00 0.00e+00 . . . . 16417 2 9 no PDB 3IYP . "The Interaction Of Decay-Accelerating Factor With Echovirus 7" . . . . . 99.21 381 100.00 100.00 0.00e+00 . . . . 16417 2 10 no PDB 3J24 . "Cryoem Reconstruction Of Complement Decay-Accelerating Factor" . . . . . 100.00 254 100.00 100.00 0.00e+00 . . . . 16417 2 11 no DBJ BAE97422 . "decay-accelerating factor splicing variant 1 [Homo sapiens]" . . . . . 98.82 439 100.00 100.00 0.00e+00 . . . . 16417 2 12 no DBJ BAE97423 . "decay-accelerating factor splicing variant 2 [Homo sapiens]" . . . . . 98.82 364 100.00 100.00 0.00e+00 . . . . 16417 2 13 no DBJ BAE97424 . "decay-accelerating factor splicing variant 3 [Homo sapiens]" . . . . . 98.82 384 100.00 100.00 0.00e+00 . . . . 16417 2 14 no DBJ BAE97425 . "decay-accelerating factor splicing variant 4 [Homo sapiens]" . . . . . 98.82 525 100.00 100.00 0.00e+00 . . . . 16417 2 15 no DBJ BAE97426 . "decay-accelerating factor splicing variant 5 [Homo sapiens]" . . . . . 98.82 551 100.00 100.00 0.00e+00 . . . . 16417 2 16 no GB AAA52167 . "decay-accelerating factor precursor, partial [Homo sapiens]" . . . . . 98.82 376 99.20 99.20 0.00e+00 . . . . 16417 2 17 no GB AAA52168 . "decay-accelerating factor A [Homo sapiens]" . . . . . 98.82 381 100.00 100.00 0.00e+00 . . . . 16417 2 18 no GB AAA52169 . "decay-accelerating factor [Homo sapiens]" . . . . . 98.82 381 100.00 100.00 0.00e+00 . . . . 16417 2 19 no GB AAB48622 . "decay-acceleration factor [Homo sapiens]" . . . . . 98.82 347 99.60 100.00 0.00e+00 . . . . 16417 2 20 no GB AAF73175 . "decay-accelerating factor [Gorilla gorilla]" . . . . . 98.82 347 97.61 98.41 0.00e+00 . . . . 16417 2 21 no PRF 1303335A . "decay accelerating factor long" . . . . . 98.82 440 100.00 100.00 0.00e+00 . . . . 16417 2 22 no PRF 1303335B . "decay accelerating factor short" . . . . . 98.82 381 100.00 100.00 0.00e+00 . . . . 16417 2 23 no REF NP_000565 . "complement decay-accelerating factor isoform 1 preproprotein [Homo sapiens]" . . . . . 98.82 381 100.00 100.00 0.00e+00 . . . . 16417 2 24 no REF NP_001108224 . "complement decay-accelerating factor isoform 2 precursor [Homo sapiens]" . . . . . 98.82 440 100.00 100.00 0.00e+00 . . . . 16417 2 25 no REF NP_001287831 . "complement decay-accelerating factor isoform 5 precursor [Homo sapiens]" . . . . . 98.82 444 100.00 100.00 0.00e+00 . . . . 16417 2 26 no REF NP_001287832 . "complement decay-accelerating factor isoform 6 precursor [Homo sapiens]" . . . . . 98.82 439 100.00 100.00 0.00e+00 . . . . 16417 2 27 no REF NP_001287833 . "complement decay-accelerating factor isoform 7 precursor [Homo sapiens]" . . . . . 98.82 384 100.00 100.00 0.00e+00 . . . . 16417 2 28 no SP P08174 . "RecName: Full=Complement decay-accelerating factor; AltName: CD_antigen=CD55; Flags: Precursor [Homo sapiens]" . . . . . 98.82 381 100.00 100.00 0.00e+00 . . . . 16417 2 stop_ loop_ _Entity_comp_index.ID _Entity_comp_index.Auth_seq_ID _Entity_comp_index.Comp_ID _Entity_comp_index.Comp_label _Entity_comp_index.Entry_ID _Entity_comp_index.Entity_ID 1 . MET . 16417 2 2 . GLN . 16417 2 3 . ASP . 16417 2 4 . CYS . 16417 2 5 . GLY . 16417 2 6 . LEU . 16417 2 7 . PRO . 16417 2 8 . PRO . 16417 2 9 . ASP . 16417 2 10 . VAL . 16417 2 11 . PRO . 16417 2 12 . ASN . 16417 2 13 . ALA . 16417 2 14 . GLN . 16417 2 15 . PRO . 16417 2 16 . ALA . 16417 2 17 . LEU . 16417 2 18 . GLU . 16417 2 19 . GLY . 16417 2 20 . ARG . 16417 2 21 . THR . 16417 2 22 . SER . 16417 2 23 . PHE . 16417 2 24 . PRO . 16417 2 25 . GLU . 16417 2 26 . ASP . 16417 2 27 . THR . 16417 2 28 . VAL . 16417 2 29 . ILE . 16417 2 30 . THR . 16417 2 31 . TYR . 16417 2 32 . LYS . 16417 2 33 . CYS . 16417 2 34 . GLU . 16417 2 35 . GLU . 16417 2 36 . SER . 16417 2 37 . PHE . 16417 2 38 . VAL . 16417 2 39 . LYS . 16417 2 40 . ILE . 16417 2 41 . PRO . 16417 2 42 . GLY . 16417 2 43 . GLU . 16417 2 44 . LYS . 16417 2 45 . ASP . 16417 2 46 . SER . 16417 2 47 . VAL . 16417 2 48 . ILE . 16417 2 49 . CYS . 16417 2 50 . LEU . 16417 2 51 . LYS . 16417 2 52 . GLY . 16417 2 53 . SER . 16417 2 54 . GLN . 16417 2 55 . TRP . 16417 2 56 . SER . 16417 2 57 . ASP . 16417 2 58 . ILE . 16417 2 59 . GLU . 16417 2 60 . GLU . 16417 2 61 . PHE . 16417 2 62 . CYS . 16417 2 63 . ASN . 16417 2 64 . ARG . 16417 2 65 . SER . 16417 2 66 . CYS . 16417 2 67 . GLU . 16417 2 68 . VAL . 16417 2 69 . PRO . 16417 2 70 . THR . 16417 2 71 . ARG . 16417 2 72 . LEU . 16417 2 73 . ASN . 16417 2 74 . SER . 16417 2 75 . ALA . 16417 2 76 . SER . 16417 2 77 . LEU . 16417 2 78 . LYS . 16417 2 79 . GLN . 16417 2 80 . PRO . 16417 2 81 . TYR . 16417 2 82 . ILE . 16417 2 83 . THR . 16417 2 84 . GLN . 16417 2 85 . ASN . 16417 2 86 . TYR . 16417 2 87 . PHE . 16417 2 88 . PRO . 16417 2 89 . VAL . 16417 2 90 . GLY . 16417 2 91 . THR . 16417 2 92 . VAL . 16417 2 93 . VAL . 16417 2 94 . GLU . 16417 2 95 . TYR . 16417 2 96 . GLU . 16417 2 97 . CYS . 16417 2 98 . ARG . 16417 2 99 . PRO . 16417 2 100 . GLY . 16417 2 101 . TYR . 16417 2 102 . ARG . 16417 2 103 . ARG . 16417 2 104 . GLU . 16417 2 105 . PRO . 16417 2 106 . SER . 16417 2 107 . LEU . 16417 2 108 . SER . 16417 2 109 . PRO . 16417 2 110 . LYS . 16417 2 111 . LEU . 16417 2 112 . THR . 16417 2 113 . CYS . 16417 2 114 . LEU . 16417 2 115 . GLN . 16417 2 116 . ASN . 16417 2 117 . LEU . 16417 2 118 . LYS . 16417 2 119 . TRP . 16417 2 120 . SER . 16417 2 121 . THR . 16417 2 122 . ALA . 16417 2 123 . VAL . 16417 2 124 . GLU . 16417 2 125 . PHE . 16417 2 126 . CYS . 16417 2 127 . LYS . 16417 2 128 . LYS . 16417 2 129 . LYS . 16417 2 130 . SER . 16417 2 131 . CYS . 16417 2 132 . PRO . 16417 2 133 . ASN . 16417 2 134 . PRO . 16417 2 135 . GLY . 16417 2 136 . GLU . 16417 2 137 . ILE . 16417 2 138 . ARG . 16417 2 139 . ASN . 16417 2 140 . GLY . 16417 2 141 . GLN . 16417 2 142 . ILE . 16417 2 143 . ASP . 16417 2 144 . VAL . 16417 2 145 . PRO . 16417 2 146 . GLY . 16417 2 147 . GLY . 16417 2 148 . ILE . 16417 2 149 . LEU . 16417 2 150 . PHE . 16417 2 151 . GLY . 16417 2 152 . ALA . 16417 2 153 . THR . 16417 2 154 . ILE . 16417 2 155 . SER . 16417 2 156 . PHE . 16417 2 157 . SER . 16417 2 158 . CYS . 16417 2 159 . ASN . 16417 2 160 . THR . 16417 2 161 . GLY . 16417 2 162 . TYR . 16417 2 163 . LYS . 16417 2 164 . LEU . 16417 2 165 . PHE . 16417 2 166 . GLY . 16417 2 167 . SER . 16417 2 168 . THR . 16417 2 169 . SER . 16417 2 170 . SER . 16417 2 171 . PHE . 16417 2 172 . CYS . 16417 2 173 . LEU . 16417 2 174 . ILE . 16417 2 175 . SER . 16417 2 176 . GLY . 16417 2 177 . SER . 16417 2 178 . SER . 16417 2 179 . VAL . 16417 2 180 . GLN . 16417 2 181 . TRP . 16417 2 182 . SER . 16417 2 183 . ASP . 16417 2 184 . PRO . 16417 2 185 . LEU . 16417 2 186 . PRO . 16417 2 187 . GLU . 16417 2 188 . CYS . 16417 2 189 . ARG . 16417 2 190 . GLU . 16417 2 191 . ILE . 16417 2 192 . TYR . 16417 2 193 . CYS . 16417 2 194 . PRO . 16417 2 195 . ALA . 16417 2 196 . PRO . 16417 2 197 . PRO . 16417 2 198 . GLN . 16417 2 199 . ILE . 16417 2 200 . ASP . 16417 2 201 . ASN . 16417 2 202 . GLY . 16417 2 203 . ILE . 16417 2 204 . ILE . 16417 2 205 . GLN . 16417 2 206 . GLY . 16417 2 207 . GLU . 16417 2 208 . ARG . 16417 2 209 . ASP . 16417 2 210 . HIS . 16417 2 211 . TYR . 16417 2 212 . GLY . 16417 2 213 . TYR . 16417 2 214 . ARG . 16417 2 215 . GLN . 16417 2 216 . SER . 16417 2 217 . VAL . 16417 2 218 . THR . 16417 2 219 . TYR . 16417 2 220 . ALA . 16417 2 221 . CYS . 16417 2 222 . ASN . 16417 2 223 . LYS . 16417 2 224 . GLY . 16417 2 225 . PHE . 16417 2 226 . THR . 16417 2 227 . MET . 16417 2 228 . ILE . 16417 2 229 . GLY . 16417 2 230 . GLU . 16417 2 231 . HIS . 16417 2 232 . SER . 16417 2 233 . ILE . 16417 2 234 . TYR . 16417 2 235 . CYS . 16417 2 236 . THR . 16417 2 237 . VAL . 16417 2 238 . ASN . 16417 2 239 . ASN . 16417 2 240 . ASP . 16417 2 241 . GLU . 16417 2 242 . GLY . 16417 2 243 . GLU . 16417 2 244 . TRP . 16417 2 245 . SER . 16417 2 246 . GLY . 16417 2 247 . PRO . 16417 2 248 . PRO . 16417 2 249 . PRO . 16417 2 250 . GLU . 16417 2 251 . CYS . 16417 2 252 . ARG . 16417 2 253 . GLY . 16417 2 254 . CYS . 16417 2 stop_ loop_ _Entity_poly_seq.Hetero _Entity_poly_seq.Mon_ID _Entity_poly_seq.Num _Entity_poly_seq.Comp_index_ID _Entity_poly_seq.Entry_ID _Entity_poly_seq.Entity_ID . MET 1 1 16417 2 . GLN 2 2 16417 2 . ASP 3 3 16417 2 . CYS 4 4 16417 2 . GLY 5 5 16417 2 . LEU 6 6 16417 2 . PRO 7 7 16417 2 . PRO 8 8 16417 2 . ASP 9 9 16417 2 . VAL 10 10 16417 2 . PRO 11 11 16417 2 . ASN 12 12 16417 2 . ALA 13 13 16417 2 . GLN 14 14 16417 2 . PRO 15 15 16417 2 . ALA 16 16 16417 2 . LEU 17 17 16417 2 . GLU 18 18 16417 2 . GLY 19 19 16417 2 . ARG 20 20 16417 2 . THR 21 21 16417 2 . SER 22 22 16417 2 . PHE 23 23 16417 2 . PRO 24 24 16417 2 . GLU 25 25 16417 2 . ASP 26 26 16417 2 . THR 27 27 16417 2 . VAL 28 28 16417 2 . ILE 29 29 16417 2 . THR 30 30 16417 2 . TYR 31 31 16417 2 . LYS 32 32 16417 2 . CYS 33 33 16417 2 . GLU 34 34 16417 2 . GLU 35 35 16417 2 . SER 36 36 16417 2 . PHE 37 37 16417 2 . VAL 38 38 16417 2 . LYS 39 39 16417 2 . ILE 40 40 16417 2 . PRO 41 41 16417 2 . GLY 42 42 16417 2 . GLU 43 43 16417 2 . LYS 44 44 16417 2 . ASP 45 45 16417 2 . SER 46 46 16417 2 . VAL 47 47 16417 2 . ILE 48 48 16417 2 . CYS 49 49 16417 2 . LEU 50 50 16417 2 . LYS 51 51 16417 2 . GLY 52 52 16417 2 . SER 53 53 16417 2 . GLN 54 54 16417 2 . TRP 55 55 16417 2 . SER 56 56 16417 2 . ASP 57 57 16417 2 . ILE 58 58 16417 2 . GLU 59 59 16417 2 . GLU 60 60 16417 2 . PHE 61 61 16417 2 . CYS 62 62 16417 2 . ASN 63 63 16417 2 . ARG 64 64 16417 2 . SER 65 65 16417 2 . CYS 66 66 16417 2 . GLU 67 67 16417 2 . VAL 68 68 16417 2 . PRO 69 69 16417 2 . THR 70 70 16417 2 . ARG 71 71 16417 2 . LEU 72 72 16417 2 . ASN 73 73 16417 2 . SER 74 74 16417 2 . ALA 75 75 16417 2 . SER 76 76 16417 2 . LEU 77 77 16417 2 . LYS 78 78 16417 2 . GLN 79 79 16417 2 . PRO 80 80 16417 2 . TYR 81 81 16417 2 . ILE 82 82 16417 2 . THR 83 83 16417 2 . GLN 84 84 16417 2 . ASN 85 85 16417 2 . TYR 86 86 16417 2 . PHE 87 87 16417 2 . PRO 88 88 16417 2 . VAL 89 89 16417 2 . GLY 90 90 16417 2 . THR 91 91 16417 2 . VAL 92 92 16417 2 . VAL 93 93 16417 2 . GLU 94 94 16417 2 . TYR 95 95 16417 2 . GLU 96 96 16417 2 . CYS 97 97 16417 2 . ARG 98 98 16417 2 . PRO 99 99 16417 2 . GLY 100 100 16417 2 . TYR 101 101 16417 2 . ARG 102 102 16417 2 . ARG 103 103 16417 2 . GLU 104 104 16417 2 . PRO 105 105 16417 2 . SER 106 106 16417 2 . LEU 107 107 16417 2 . SER 108 108 16417 2 . PRO 109 109 16417 2 . LYS 110 110 16417 2 . LEU 111 111 16417 2 . THR 112 112 16417 2 . CYS 113 113 16417 2 . LEU 114 114 16417 2 . GLN 115 115 16417 2 . ASN 116 116 16417 2 . LEU 117 117 16417 2 . LYS 118 118 16417 2 . TRP 119 119 16417 2 . SER 120 120 16417 2 . THR 121 121 16417 2 . ALA 122 122 16417 2 . VAL 123 123 16417 2 . GLU 124 124 16417 2 . PHE 125 125 16417 2 . CYS 126 126 16417 2 . LYS 127 127 16417 2 . LYS 128 128 16417 2 . LYS 129 129 16417 2 . SER 130 130 16417 2 . CYS 131 131 16417 2 . PRO 132 132 16417 2 . ASN 133 133 16417 2 . PRO 134 134 16417 2 . GLY 135 135 16417 2 . GLU 136 136 16417 2 . ILE 137 137 16417 2 . ARG 138 138 16417 2 . ASN 139 139 16417 2 . GLY 140 140 16417 2 . GLN 141 141 16417 2 . ILE 142 142 16417 2 . ASP 143 143 16417 2 . VAL 144 144 16417 2 . PRO 145 145 16417 2 . GLY 146 146 16417 2 . GLY 147 147 16417 2 . ILE 148 148 16417 2 . LEU 149 149 16417 2 . PHE 150 150 16417 2 . GLY 151 151 16417 2 . ALA 152 152 16417 2 . THR 153 153 16417 2 . ILE 154 154 16417 2 . SER 155 155 16417 2 . PHE 156 156 16417 2 . SER 157 157 16417 2 . CYS 158 158 16417 2 . ASN 159 159 16417 2 . THR 160 160 16417 2 . GLY 161 161 16417 2 . TYR 162 162 16417 2 . LYS 163 163 16417 2 . LEU 164 164 16417 2 . PHE 165 165 16417 2 . GLY 166 166 16417 2 . SER 167 167 16417 2 . THR 168 168 16417 2 . SER 169 169 16417 2 . SER 170 170 16417 2 . PHE 171 171 16417 2 . CYS 172 172 16417 2 . LEU 173 173 16417 2 . ILE 174 174 16417 2 . SER 175 175 16417 2 . GLY 176 176 16417 2 . SER 177 177 16417 2 . SER 178 178 16417 2 . VAL 179 179 16417 2 . GLN 180 180 16417 2 . TRP 181 181 16417 2 . SER 182 182 16417 2 . ASP 183 183 16417 2 . PRO 184 184 16417 2 . LEU 185 185 16417 2 . PRO 186 186 16417 2 . GLU 187 187 16417 2 . CYS 188 188 16417 2 . ARG 189 189 16417 2 . GLU 190 190 16417 2 . ILE 191 191 16417 2 . TYR 192 192 16417 2 . CYS 193 193 16417 2 . PRO 194 194 16417 2 . ALA 195 195 16417 2 . PRO 196 196 16417 2 . PRO 197 197 16417 2 . GLN 198 198 16417 2 . ILE 199 199 16417 2 . ASP 200 200 16417 2 . ASN 201 201 16417 2 . GLY 202 202 16417 2 . ILE 203 203 16417 2 . ILE 204 204 16417 2 . GLN 205 205 16417 2 . GLY 206 206 16417 2 . GLU 207 207 16417 2 . ARG 208 208 16417 2 . ASP 209 209 16417 2 . HIS 210 210 16417 2 . TYR 211 211 16417 2 . GLY 212 212 16417 2 . TYR 213 213 16417 2 . ARG 214 214 16417 2 . GLN 215 215 16417 2 . SER 216 216 16417 2 . VAL 217 217 16417 2 . THR 218 218 16417 2 . TYR 219 219 16417 2 . ALA 220 220 16417 2 . CYS 221 221 16417 2 . ASN 222 222 16417 2 . LYS 223 223 16417 2 . GLY 224 224 16417 2 . PHE 225 225 16417 2 . THR 226 226 16417 2 . MET 227 227 16417 2 . ILE 228 228 16417 2 . GLY 229 229 16417 2 . GLU 230 230 16417 2 . HIS 231 231 16417 2 . SER 232 232 16417 2 . ILE 233 233 16417 2 . TYR 234 234 16417 2 . CYS 235 235 16417 2 . THR 236 236 16417 2 . VAL 237 237 16417 2 . ASN 238 238 16417 2 . ASN 239 239 16417 2 . ASP 240 240 16417 2 . GLU 241 241 16417 2 . GLY 242 242 16417 2 . GLU 243 243 16417 2 . TRP 244 244 16417 2 . SER 245 245 16417 2 . GLY 246 246 16417 2 . PRO 247 247 16417 2 . PRO 248 248 16417 2 . PRO 249 249 16417 2 . GLU 250 250 16417 2 . CYS 251 251 16417 2 . ARG 252 252 16417 2 . GLY 253 253 16417 2 . CYS 254 254 16417 2 stop_ save_ save_DAF _Entity.Sf_category entity _Entity.Sf_framecode DAF _Entity.Entry_ID 16417 _Entity.ID 3 _Entity.BMRB_code . _Entity.Name DAF _Entity.Type polymer _Entity.Polymer_common_type . _Entity.Polymer_type polypeptide(L) _Entity.Polymer_type_details . _Entity.Polymer_strand_ID . _Entity.Polymer_seq_one_letter_code_can . _Entity.Polymer_seq_one_letter_code ; MQDCGLPPDVPNAQPALEGR TSFPEDTVITYKCEESFVKI PGEKDSVICLKGSQWSDIEE FCNRSCEVPTRLNSASLKQP YITQNYFPVGTVVEYECRPG YRREPSLSPKLTCLQNLKWS TAVEFCKKKSCPNPGEIRNG QIDVPGGILFGATISFSCNT GYKLFGSTSSFCLISGSSVQ WSDPLPECREIYCPAPPQID NGIIQGERDHYGYRQSVTYA CNKGFTMIGEHSIYCTVNND EGEWSGPPPECRGC ; _Entity.Target_identifier . _Entity.Polymer_author_defined_seq . _Entity.Polymer_author_seq_details . _Entity.Ambiguous_conformational_states no _Entity.Ambiguous_chem_comp_sites no _Entity.Nstd_monomer no _Entity.Nstd_chirality no _Entity.Nstd_linkage no _Entity.Nonpolymer_comp_ID . _Entity.Nonpolymer_comp_label . _Entity.Number_of_monomers 254 _Entity.Number_of_nonpolymer_components . _Entity.Paramagnetic no _Entity.Thiol_state 'not reported' _Entity.Src_method . _Entity.Parent_entity_ID . _Entity.Fragment . _Entity.Mutation . _Entity.EC_number . _Entity.Calc_isoelectric_point . _Entity.Formula_weight 57794.34 _Entity.Formula_weight_exptl . _Entity.Formula_weight_exptl_meth . _Entity.Details . _Entity.DB_query_date . _Entity.DB_query_revised_last_date 2015-01-30 loop_ _Entity_db_link.Ordinal _Entity_db_link.Author_supplied _Entity_db_link.Database_code _Entity_db_link.Accession_code _Entity_db_link.Entry_mol_code _Entity_db_link.Entry_mol_name _Entity_db_link.Entry_experimental_method _Entity_db_link.Entry_structure_resolution _Entity_db_link.Entry_relation_type _Entity_db_link.Entry_details _Entity_db_link.Chimera_segment_ID _Entity_db_link.Seq_query_to_submitted_percent _Entity_db_link.Seq_subject_length _Entity_db_link.Seq_identity _Entity_db_link.Seq_positive _Entity_db_link.Seq_homology_expectation_val _Entity_db_link.Seq_align_begin _Entity_db_link.Seq_align_end _Entity_db_link.Seq_difference_details _Entity_db_link.Seq_alignment_details _Entity_db_link.Entry_ID _Entity_db_link.Entity_ID 1 no PDB 1OJV . "Decay Accelerating Factor (Cd55): The Structure Of An Intact Human Complement Regulator." . . . . . 100.00 254 100.00 100.00 0.00e+00 . . . . 16417 3 2 no PDB 1OJW . "Decay Accelerating Factor (Cd55): The Structure Of An Intact Human Complement Regulator." . . . . . 100.00 254 100.00 100.00 0.00e+00 . . . . 16417 3 3 no PDB 1OJY . "Decay Accelerating Factor (Cd55): The Structure Of An Intact Human Complement Regulator." . . . . . 100.00 254 100.00 100.00 0.00e+00 . . . . 16417 3 4 no PDB 1OK1 . "Decay Accelerating Factor (cd55): The Structure Of An Intact Human Complement Regulator." . . . . . 100.00 254 100.00 100.00 0.00e+00 . . . . 16417 3 5 no PDB 1OK2 . "Decay Accelerating Factor (Cd55): The Structure Of An Intact Human Complement Regulator." . . . . . 100.00 254 100.00 100.00 0.00e+00 . . . . 16417 3 6 no PDB 1OK3 . "Decay Accelerating Factor (cd55): The Structure Of An Intact Human Complement Regulator" . . . . . 99.61 254 99.60 99.60 0.00e+00 . . . . 16417 3 7 no PDB 1OK9 . "Decay Accelerating Factor (Cd55): The Structure Of An Intact Human Complement Regulator." . . . . . 100.00 254 100.00 100.00 0.00e+00 . . . . 16417 3 8 no PDB 2C8I . "Complex Of Echovirus Type 12 With Domains 1, 2, 3 And 4 Of Its Receptor Decay Accelerating Factor (Cd55) By Cryo Electron Micro" . . . . . 99.21 316 100.00 100.00 0.00e+00 . . . . 16417 3 9 no PDB 3IYP . "The Interaction Of Decay-Accelerating Factor With Echovirus 7" . . . . . 99.21 381 100.00 100.00 0.00e+00 . . . . 16417 3 10 no PDB 3J24 . "Cryoem Reconstruction Of Complement Decay-Accelerating Factor" . . . . . 100.00 254 100.00 100.00 0.00e+00 . . . . 16417 3 11 no DBJ BAE97422 . "decay-accelerating factor splicing variant 1 [Homo sapiens]" . . . . . 98.82 439 100.00 100.00 0.00e+00 . . . . 16417 3 12 no DBJ BAE97423 . "decay-accelerating factor splicing variant 2 [Homo sapiens]" . . . . . 98.82 364 100.00 100.00 0.00e+00 . . . . 16417 3 13 no DBJ BAE97424 . "decay-accelerating factor splicing variant 3 [Homo sapiens]" . . . . . 98.82 384 100.00 100.00 0.00e+00 . . . . 16417 3 14 no DBJ BAE97425 . "decay-accelerating factor splicing variant 4 [Homo sapiens]" . . . . . 98.82 525 100.00 100.00 0.00e+00 . . . . 16417 3 15 no DBJ BAE97426 . "decay-accelerating factor splicing variant 5 [Homo sapiens]" . . . . . 98.82 551 100.00 100.00 0.00e+00 . . . . 16417 3 16 no GB AAA52167 . "decay-accelerating factor precursor, partial [Homo sapiens]" . . . . . 98.82 376 99.20 99.20 0.00e+00 . . . . 16417 3 17 no GB AAA52168 . "decay-accelerating factor A [Homo sapiens]" . . . . . 98.82 381 100.00 100.00 0.00e+00 . . . . 16417 3 18 no GB AAA52169 . "decay-accelerating factor [Homo sapiens]" . . . . . 98.82 381 100.00 100.00 0.00e+00 . . . . 16417 3 19 no GB AAB48622 . "decay-acceleration factor [Homo sapiens]" . . . . . 98.82 347 99.60 100.00 0.00e+00 . . . . 16417 3 20 no GB AAF73175 . "decay-accelerating factor [Gorilla gorilla]" . . . . . 98.82 347 97.61 98.41 0.00e+00 . . . . 16417 3 21 no PRF 1303335A . "decay accelerating factor long" . . . . . 98.82 440 100.00 100.00 0.00e+00 . . . . 16417 3 22 no PRF 1303335B . "decay accelerating factor short" . . . . . 98.82 381 100.00 100.00 0.00e+00 . . . . 16417 3 23 no REF NP_000565 . "complement decay-accelerating factor isoform 1 preproprotein [Homo sapiens]" . . . . . 98.82 381 100.00 100.00 0.00e+00 . . . . 16417 3 24 no REF NP_001108224 . "complement decay-accelerating factor isoform 2 precursor [Homo sapiens]" . . . . . 98.82 440 100.00 100.00 0.00e+00 . . . . 16417 3 25 no REF NP_001287831 . "complement decay-accelerating factor isoform 5 precursor [Homo sapiens]" . . . . . 98.82 444 100.00 100.00 0.00e+00 . . . . 16417 3 26 no REF NP_001287832 . "complement decay-accelerating factor isoform 6 precursor [Homo sapiens]" . . . . . 98.82 439 100.00 100.00 0.00e+00 . . . . 16417 3 27 no REF NP_001287833 . "complement decay-accelerating factor isoform 7 precursor [Homo sapiens]" . . . . . 98.82 384 100.00 100.00 0.00e+00 . . . . 16417 3 28 no SP P08174 . "RecName: Full=Complement decay-accelerating factor; AltName: CD_antigen=CD55; Flags: Precursor [Homo sapiens]" . . . . . 98.82 381 100.00 100.00 0.00e+00 . . . . 16417 3 stop_ loop_ _Entity_comp_index.ID _Entity_comp_index.Auth_seq_ID _Entity_comp_index.Comp_ID _Entity_comp_index.Comp_label _Entity_comp_index.Entry_ID _Entity_comp_index.Entity_ID 1 . MET . 16417 3 2 . GLN . 16417 3 3 . ASP . 16417 3 4 . CYS . 16417 3 5 . GLY . 16417 3 6 . LEU . 16417 3 7 . PRO . 16417 3 8 . PRO . 16417 3 9 . ASP . 16417 3 10 . VAL . 16417 3 11 . PRO . 16417 3 12 . ASN . 16417 3 13 . ALA . 16417 3 14 . GLN . 16417 3 15 . PRO . 16417 3 16 . ALA . 16417 3 17 . LEU . 16417 3 18 . GLU . 16417 3 19 . GLY . 16417 3 20 . ARG . 16417 3 21 . THR . 16417 3 22 . SER . 16417 3 23 . PHE . 16417 3 24 . PRO . 16417 3 25 . GLU . 16417 3 26 . ASP . 16417 3 27 . THR . 16417 3 28 . VAL . 16417 3 29 . ILE . 16417 3 30 . THR . 16417 3 31 . TYR . 16417 3 32 . LYS . 16417 3 33 . CYS . 16417 3 34 . GLU . 16417 3 35 . GLU . 16417 3 36 . SER . 16417 3 37 . PHE . 16417 3 38 . VAL . 16417 3 39 . LYS . 16417 3 40 . ILE . 16417 3 41 . PRO . 16417 3 42 . GLY . 16417 3 43 . GLU . 16417 3 44 . LYS . 16417 3 45 . ASP . 16417 3 46 . SER . 16417 3 47 . VAL . 16417 3 48 . ILE . 16417 3 49 . CYS . 16417 3 50 . LEU . 16417 3 51 . LYS . 16417 3 52 . GLY . 16417 3 53 . SER . 16417 3 54 . GLN . 16417 3 55 . TRP . 16417 3 56 . SER . 16417 3 57 . ASP . 16417 3 58 . ILE . 16417 3 59 . GLU . 16417 3 60 . GLU . 16417 3 61 . PHE . 16417 3 62 . CYS . 16417 3 63 . ASN . 16417 3 64 . ARG . 16417 3 65 . SER . 16417 3 66 . CYS . 16417 3 67 . GLU . 16417 3 68 . VAL . 16417 3 69 . PRO . 16417 3 70 . THR . 16417 3 71 . ARG . 16417 3 72 . LEU . 16417 3 73 . ASN . 16417 3 74 . SER . 16417 3 75 . ALA . 16417 3 76 . SER . 16417 3 77 . LEU . 16417 3 78 . LYS . 16417 3 79 . GLN . 16417 3 80 . PRO . 16417 3 81 . TYR . 16417 3 82 . ILE . 16417 3 83 . THR . 16417 3 84 . GLN . 16417 3 85 . ASN . 16417 3 86 . TYR . 16417 3 87 . PHE . 16417 3 88 . PRO . 16417 3 89 . VAL . 16417 3 90 . GLY . 16417 3 91 . THR . 16417 3 92 . VAL . 16417 3 93 . VAL . 16417 3 94 . GLU . 16417 3 95 . TYR . 16417 3 96 . GLU . 16417 3 97 . CYS . 16417 3 98 . ARG . 16417 3 99 . PRO . 16417 3 100 . GLY . 16417 3 101 . TYR . 16417 3 102 . ARG . 16417 3 103 . ARG . 16417 3 104 . GLU . 16417 3 105 . PRO . 16417 3 106 . SER . 16417 3 107 . LEU . 16417 3 108 . SER . 16417 3 109 . PRO . 16417 3 110 . LYS . 16417 3 111 . LEU . 16417 3 112 . THR . 16417 3 113 . CYS . 16417 3 114 . LEU . 16417 3 115 . GLN . 16417 3 116 . ASN . 16417 3 117 . LEU . 16417 3 118 . LYS . 16417 3 119 . TRP . 16417 3 120 . SER . 16417 3 121 . THR . 16417 3 122 . ALA . 16417 3 123 . VAL . 16417 3 124 . GLU . 16417 3 125 . PHE . 16417 3 126 . CYS . 16417 3 127 . LYS . 16417 3 128 . LYS . 16417 3 129 . LYS . 16417 3 130 . SER . 16417 3 131 . CYS . 16417 3 132 . PRO . 16417 3 133 . ASN . 16417 3 134 . PRO . 16417 3 135 . GLY . 16417 3 136 . GLU . 16417 3 137 . ILE . 16417 3 138 . ARG . 16417 3 139 . ASN . 16417 3 140 . GLY . 16417 3 141 . GLN . 16417 3 142 . ILE . 16417 3 143 . ASP . 16417 3 144 . VAL . 16417 3 145 . PRO . 16417 3 146 . GLY . 16417 3 147 . GLY . 16417 3 148 . ILE . 16417 3 149 . LEU . 16417 3 150 . PHE . 16417 3 151 . GLY . 16417 3 152 . ALA . 16417 3 153 . THR . 16417 3 154 . ILE . 16417 3 155 . SER . 16417 3 156 . PHE . 16417 3 157 . SER . 16417 3 158 . CYS . 16417 3 159 . ASN . 16417 3 160 . THR . 16417 3 161 . GLY . 16417 3 162 . TYR . 16417 3 163 . LYS . 16417 3 164 . LEU . 16417 3 165 . PHE . 16417 3 166 . GLY . 16417 3 167 . SER . 16417 3 168 . THR . 16417 3 169 . SER . 16417 3 170 . SER . 16417 3 171 . PHE . 16417 3 172 . CYS . 16417 3 173 . LEU . 16417 3 174 . ILE . 16417 3 175 . SER . 16417 3 176 . GLY . 16417 3 177 . SER . 16417 3 178 . SER . 16417 3 179 . VAL . 16417 3 180 . GLN . 16417 3 181 . TRP . 16417 3 182 . SER . 16417 3 183 . ASP . 16417 3 184 . PRO . 16417 3 185 . LEU . 16417 3 186 . PRO . 16417 3 187 . GLU . 16417 3 188 . CYS . 16417 3 189 . ARG . 16417 3 190 . GLU . 16417 3 191 . ILE . 16417 3 192 . TYR . 16417 3 193 . CYS . 16417 3 194 . PRO . 16417 3 195 . ALA . 16417 3 196 . PRO . 16417 3 197 . PRO . 16417 3 198 . GLN . 16417 3 199 . ILE . 16417 3 200 . ASP . 16417 3 201 . ASN . 16417 3 202 . GLY . 16417 3 203 . ILE . 16417 3 204 . ILE . 16417 3 205 . GLN . 16417 3 206 . GLY . 16417 3 207 . GLU . 16417 3 208 . ARG . 16417 3 209 . ASP . 16417 3 210 . HIS . 16417 3 211 . TYR . 16417 3 212 . GLY . 16417 3 213 . TYR . 16417 3 214 . ARG . 16417 3 215 . GLN . 16417 3 216 . SER . 16417 3 217 . VAL . 16417 3 218 . THR . 16417 3 219 . TYR . 16417 3 220 . ALA . 16417 3 221 . CYS . 16417 3 222 . ASN . 16417 3 223 . LYS . 16417 3 224 . GLY . 16417 3 225 . PHE . 16417 3 226 . THR . 16417 3 227 . MET . 16417 3 228 . ILE . 16417 3 229 . GLY . 16417 3 230 . GLU . 16417 3 231 . HIS . 16417 3 232 . SER . 16417 3 233 . ILE . 16417 3 234 . TYR . 16417 3 235 . CYS . 16417 3 236 . THR . 16417 3 237 . VAL . 16417 3 238 . ASN . 16417 3 239 . ASN . 16417 3 240 . ASP . 16417 3 241 . GLU . 16417 3 242 . GLY . 16417 3 243 . GLU . 16417 3 244 . TRP . 16417 3 245 . SER . 16417 3 246 . GLY . 16417 3 247 . PRO . 16417 3 248 . PRO . 16417 3 249 . PRO . 16417 3 250 . GLU . 16417 3 251 . CYS . 16417 3 252 . ARG . 16417 3 253 . GLY . 16417 3 254 . CYS . 16417 3 stop_ loop_ _Entity_poly_seq.Hetero _Entity_poly_seq.Mon_ID _Entity_poly_seq.Num _Entity_poly_seq.Comp_index_ID _Entity_poly_seq.Entry_ID _Entity_poly_seq.Entity_ID . MET 1 1 16417 3 . GLN 2 2 16417 3 . ASP 3 3 16417 3 . CYS 4 4 16417 3 . GLY 5 5 16417 3 . LEU 6 6 16417 3 . PRO 7 7 16417 3 . PRO 8 8 16417 3 . ASP 9 9 16417 3 . VAL 10 10 16417 3 . PRO 11 11 16417 3 . ASN 12 12 16417 3 . ALA 13 13 16417 3 . GLN 14 14 16417 3 . PRO 15 15 16417 3 . ALA 16 16 16417 3 . LEU 17 17 16417 3 . GLU 18 18 16417 3 . GLY 19 19 16417 3 . ARG 20 20 16417 3 . THR 21 21 16417 3 . SER 22 22 16417 3 . PHE 23 23 16417 3 . PRO 24 24 16417 3 . GLU 25 25 16417 3 . ASP 26 26 16417 3 . THR 27 27 16417 3 . VAL 28 28 16417 3 . ILE 29 29 16417 3 . THR 30 30 16417 3 . TYR 31 31 16417 3 . LYS 32 32 16417 3 . CYS 33 33 16417 3 . GLU 34 34 16417 3 . GLU 35 35 16417 3 . SER 36 36 16417 3 . PHE 37 37 16417 3 . VAL 38 38 16417 3 . LYS 39 39 16417 3 . ILE 40 40 16417 3 . PRO 41 41 16417 3 . GLY 42 42 16417 3 . GLU 43 43 16417 3 . LYS 44 44 16417 3 . ASP 45 45 16417 3 . SER 46 46 16417 3 . VAL 47 47 16417 3 . ILE 48 48 16417 3 . CYS 49 49 16417 3 . LEU 50 50 16417 3 . LYS 51 51 16417 3 . GLY 52 52 16417 3 . SER 53 53 16417 3 . GLN 54 54 16417 3 . TRP 55 55 16417 3 . SER 56 56 16417 3 . ASP 57 57 16417 3 . ILE 58 58 16417 3 . GLU 59 59 16417 3 . GLU 60 60 16417 3 . PHE 61 61 16417 3 . CYS 62 62 16417 3 . ASN 63 63 16417 3 . ARG 64 64 16417 3 . SER 65 65 16417 3 . CYS 66 66 16417 3 . GLU 67 67 16417 3 . VAL 68 68 16417 3 . PRO 69 69 16417 3 . THR 70 70 16417 3 . ARG 71 71 16417 3 . LEU 72 72 16417 3 . ASN 73 73 16417 3 . SER 74 74 16417 3 . ALA 75 75 16417 3 . SER 76 76 16417 3 . LEU 77 77 16417 3 . LYS 78 78 16417 3 . GLN 79 79 16417 3 . PRO 80 80 16417 3 . TYR 81 81 16417 3 . ILE 82 82 16417 3 . THR 83 83 16417 3 . GLN 84 84 16417 3 . ASN 85 85 16417 3 . TYR 86 86 16417 3 . PHE 87 87 16417 3 . PRO 88 88 16417 3 . VAL 89 89 16417 3 . GLY 90 90 16417 3 . THR 91 91 16417 3 . VAL 92 92 16417 3 . VAL 93 93 16417 3 . GLU 94 94 16417 3 . TYR 95 95 16417 3 . GLU 96 96 16417 3 . CYS 97 97 16417 3 . ARG 98 98 16417 3 . PRO 99 99 16417 3 . GLY 100 100 16417 3 . TYR 101 101 16417 3 . ARG 102 102 16417 3 . ARG 103 103 16417 3 . GLU 104 104 16417 3 . PRO 105 105 16417 3 . SER 106 106 16417 3 . LEU 107 107 16417 3 . SER 108 108 16417 3 . PRO 109 109 16417 3 . LYS 110 110 16417 3 . LEU 111 111 16417 3 . THR 112 112 16417 3 . CYS 113 113 16417 3 . LEU 114 114 16417 3 . GLN 115 115 16417 3 . ASN 116 116 16417 3 . LEU 117 117 16417 3 . LYS 118 118 16417 3 . TRP 119 119 16417 3 . SER 120 120 16417 3 . THR 121 121 16417 3 . ALA 122 122 16417 3 . VAL 123 123 16417 3 . GLU 124 124 16417 3 . PHE 125 125 16417 3 . CYS 126 126 16417 3 . LYS 127 127 16417 3 . LYS 128 128 16417 3 . LYS 129 129 16417 3 . SER 130 130 16417 3 . CYS 131 131 16417 3 . PRO 132 132 16417 3 . ASN 133 133 16417 3 . PRO 134 134 16417 3 . GLY 135 135 16417 3 . GLU 136 136 16417 3 . ILE 137 137 16417 3 . ARG 138 138 16417 3 . ASN 139 139 16417 3 . GLY 140 140 16417 3 . GLN 141 141 16417 3 . ILE 142 142 16417 3 . ASP 143 143 16417 3 . VAL 144 144 16417 3 . PRO 145 145 16417 3 . GLY 146 146 16417 3 . GLY 147 147 16417 3 . ILE 148 148 16417 3 . LEU 149 149 16417 3 . PHE 150 150 16417 3 . GLY 151 151 16417 3 . ALA 152 152 16417 3 . THR 153 153 16417 3 . ILE 154 154 16417 3 . SER 155 155 16417 3 . PHE 156 156 16417 3 . SER 157 157 16417 3 . CYS 158 158 16417 3 . ASN 159 159 16417 3 . THR 160 160 16417 3 . GLY 161 161 16417 3 . TYR 162 162 16417 3 . LYS 163 163 16417 3 . LEU 164 164 16417 3 . PHE 165 165 16417 3 . GLY 166 166 16417 3 . SER 167 167 16417 3 . THR 168 168 16417 3 . SER 169 169 16417 3 . SER 170 170 16417 3 . PHE 171 171 16417 3 . CYS 172 172 16417 3 . LEU 173 173 16417 3 . ILE 174 174 16417 3 . SER 175 175 16417 3 . GLY 176 176 16417 3 . SER 177 177 16417 3 . SER 178 178 16417 3 . VAL 179 179 16417 3 . GLN 180 180 16417 3 . TRP 181 181 16417 3 . SER 182 182 16417 3 . ASP 183 183 16417 3 . PRO 184 184 16417 3 . LEU 185 185 16417 3 . PRO 186 186 16417 3 . GLU 187 187 16417 3 . CYS 188 188 16417 3 . ARG 189 189 16417 3 . GLU 190 190 16417 3 . ILE 191 191 16417 3 . TYR 192 192 16417 3 . CYS 193 193 16417 3 . PRO 194 194 16417 3 . ALA 195 195 16417 3 . PRO 196 196 16417 3 . PRO 197 197 16417 3 . GLN 198 198 16417 3 . ILE 199 199 16417 3 . ASP 200 200 16417 3 . ASN 201 201 16417 3 . GLY 202 202 16417 3 . ILE 203 203 16417 3 . ILE 204 204 16417 3 . GLN 205 205 16417 3 . GLY 206 206 16417 3 . GLU 207 207 16417 3 . ARG 208 208 16417 3 . ASP 209 209 16417 3 . HIS 210 210 16417 3 . TYR 211 211 16417 3 . GLY 212 212 16417 3 . TYR 213 213 16417 3 . ARG 214 214 16417 3 . GLN 215 215 16417 3 . SER 216 216 16417 3 . VAL 217 217 16417 3 . THR 218 218 16417 3 . TYR 219 219 16417 3 . ALA 220 220 16417 3 . CYS 221 221 16417 3 . ASN 222 222 16417 3 . LYS 223 223 16417 3 . GLY 224 224 16417 3 . PHE 225 225 16417 3 . THR 226 226 16417 3 . MET 227 227 16417 3 . ILE 228 228 16417 3 . GLY 229 229 16417 3 . GLU 230 230 16417 3 . HIS 231 231 16417 3 . SER 232 232 16417 3 . ILE 233 233 16417 3 . TYR 234 234 16417 3 . CYS 235 235 16417 3 . THR 236 236 16417 3 . VAL 237 237 16417 3 . ASN 238 238 16417 3 . ASN 239 239 16417 3 . ASP 240 240 16417 3 . GLU 241 241 16417 3 . GLY 242 242 16417 3 . GLU 243 243 16417 3 . TRP 244 244 16417 3 . SER 245 245 16417 3 . GLY 246 246 16417 3 . PRO 247 247 16417 3 . PRO 248 248 16417 3 . PRO 249 249 16417 3 . GLU 250 250 16417 3 . CYS 251 251 16417 3 . ARG 252 252 16417 3 . GLY 253 253 16417 3 . CYS 254 254 16417 3 stop_ save_ #################### # Natural source # #################### save_natural_source _Entity_natural_src_list.Sf_category natural_source _Entity_natural_src_list.Sf_framecode natural_source _Entity_natural_src_list.Entry_ID 16417 _Entity_natural_src_list.ID 1 loop_ _Entity_natural_src.ID _Entity_natural_src.Entity_ID _Entity_natural_src.Entity_label _Entity_natural_src.Entity_chimera_segment_ID _Entity_natural_src.NCBI_taxonomy_ID _Entity_natural_src.Type _Entity_natural_src.Common _Entity_natural_src.Organism_name_scientific _Entity_natural_src.Organism_name_common _Entity_natural_src.Organism_acronym _Entity_natural_src.ICTVdb_decimal_code _Entity_natural_src.Superkingdom _Entity_natural_src.Kingdom _Entity_natural_src.Genus _Entity_natural_src.Species _Entity_natural_src.Strain _Entity_natural_src.Variant _Entity_natural_src.Subvariant _Entity_natural_src.Organ _Entity_natural_src.Tissue _Entity_natural_src.Tissue_fraction _Entity_natural_src.Cell_line _Entity_natural_src.Cell_type _Entity_natural_src.ATCC_number _Entity_natural_src.Organelle _Entity_natural_src.Cellular_location _Entity_natural_src.Fragment _Entity_natural_src.Fraction _Entity_natural_src.Secretion _Entity_natural_src.Plasmid _Entity_natural_src.Plasmid_details _Entity_natural_src.Gene_mnemonic _Entity_natural_src.Dev_stage _Entity_natural_src.Details _Entity_natural_src.Citation_ID _Entity_natural_src.Citation_label _Entity_natural_src.Entry_ID _Entity_natural_src.Entity_natural_src_list_ID 1 1 $AfaE-dsc . 562 organism . 'Escherichia coli' 'E. coli' . . Eubacteria . Escherichia coli M15 Quiagen . . . . . . . . . . . . . . . . . . . 16417 1 stop_ save_ ######################### # Experimental source # ######################### save_experimental_source _Entity_experimental_src_list.Sf_category experimental_source _Entity_experimental_src_list.Sf_framecode experimental_source _Entity_experimental_src_list.Entry_ID 16417 _Entity_experimental_src_list.ID 1 loop_ _Entity_experimental_src.ID _Entity_experimental_src.Entity_ID _Entity_experimental_src.Entity_label _Entity_experimental_src.Entity_chimera_segment_ID _Entity_experimental_src.Production_method _Entity_experimental_src.Host_org_scientific_name _Entity_experimental_src.Host_org_name_common _Entity_experimental_src.Host_org_details _Entity_experimental_src.Host_org_NCBI_taxonomy_ID _Entity_experimental_src.Host_org_genus _Entity_experimental_src.Host_org_species _Entity_experimental_src.Host_org_strain _Entity_experimental_src.Host_org_variant _Entity_experimental_src.Host_org_subvariant _Entity_experimental_src.Host_org_organ _Entity_experimental_src.Host_org_tissue _Entity_experimental_src.Host_org_tissue_fraction _Entity_experimental_src.Host_org_cell_line _Entity_experimental_src.Host_org_cell_type _Entity_experimental_src.Host_org_cellular_location _Entity_experimental_src.Host_org_organelle _Entity_experimental_src.Host_org_gene _Entity_experimental_src.Host_org_culture_collection _Entity_experimental_src.Host_org_ATCC_number _Entity_experimental_src.Vector_type _Entity_experimental_src.PDBview_host_org_vector_name _Entity_experimental_src.PDBview_plasmid_name _Entity_experimental_src.Vector_name _Entity_experimental_src.Vector_details _Entity_experimental_src.Vendor_name _Entity_experimental_src.Host_org_dev_stage _Entity_experimental_src.Details _Entity_experimental_src.Citation_ID _Entity_experimental_src.Citation_label _Entity_experimental_src.Entry_ID _Entity_experimental_src.Entity_experimental_src_list_ID 1 1 $AfaE-dsc . 'recombinant technology' 'Escherichia coli' . . . Escherichia coli BL21 DE3 . . . . . . . . . . . . . . na . . . . . . 16417 1 stop_ save_ ##################################### # Sample contents and methodology # ##################################### ######################## # Sample description # ######################## save_sample_1 _Sample.Sf_category sample _Sample.Sf_framecode sample_1 _Sample.Entry_ID 16417 _Sample.ID 1 _Sample.Type solution _Sample.Sub_type . _Sample.Details . _Sample.Aggregate_sample_number . _Sample.Solvent_system H2O _Sample.Preparation_date . _Sample.Preparation_expiration_date . _Sample.Polycrystallization_protocol . _Sample.Single_crystal_protocol . _Sample.Crystal_grow_apparatus . _Sample.Crystal_grow_atmosphere . _Sample.Crystal_grow_details . _Sample.Crystal_grow_method . _Sample.Crystal_grow_method_cit_ID . _Sample.Crystal_grow_pH . _Sample.Crystal_grow_pH_range . _Sample.Crystal_grow_pressure . _Sample.Crystal_grow_pressure_esd . _Sample.Crystal_grow_seeding . _Sample.Crystal_grow_seeding_cit_ID . _Sample.Crystal_grow_temp . _Sample.Crystal_grow_temp_details . _Sample.Crystal_grow_temp_esd . _Sample.Crystal_grow_time . _Sample.Oriented_sample_prep_protocol . _Sample.Lyophilization_cryo_protectant . _Sample.Storage_protocol . loop_ _Sample_component.ID _Sample_component.Mol_common_name _Sample_component.Isotopic_labeling _Sample_component.Assembly_ID _Sample_component.Assembly_label _Sample_component.Entity_ID _Sample_component.Entity_label _Sample_component.Product_ID _Sample_component.Type _Sample_component.Concentration_val _Sample_component.Concentration_val_min _Sample_component.Concentration_val_max _Sample_component.Concentration_val_units _Sample_component.Concentration_val_err _Sample_component.Vendor _Sample_component.Vendor_product_name _Sample_component.Vendor_product_code _Sample_component.Entry_ID _Sample_component.Sample_ID 1 AfaE-dsc '[U-13C; U-15N]' . . 1 $AfaE-dsc . . 30 . . uM . . . . 16417 1 2 'sodium acetate' 'natural abundance' . . . . . . 50 . . mM . . . . 16417 1 3 DAF [U-15N] . . 3 $DAF . . . 0 30 uM . . . . 16417 1 stop_ save_ save_sample_2 _Sample.Sf_category sample _Sample.Sf_framecode sample_2 _Sample.Entry_ID 16417 _Sample.ID 2 _Sample.Type solution _Sample.Sub_type . _Sample.Details . _Sample.Aggregate_sample_number . _Sample.Solvent_system H2O _Sample.Preparation_date . _Sample.Preparation_expiration_date . _Sample.Polycrystallization_protocol . _Sample.Single_crystal_protocol . _Sample.Crystal_grow_apparatus . _Sample.Crystal_grow_atmosphere . _Sample.Crystal_grow_details . _Sample.Crystal_grow_method . _Sample.Crystal_grow_method_cit_ID . _Sample.Crystal_grow_pH . _Sample.Crystal_grow_pH_range . _Sample.Crystal_grow_pressure . _Sample.Crystal_grow_pressure_esd . _Sample.Crystal_grow_seeding . _Sample.Crystal_grow_seeding_cit_ID . _Sample.Crystal_grow_temp . _Sample.Crystal_grow_temp_details . _Sample.Crystal_grow_temp_esd . _Sample.Crystal_grow_time . _Sample.Oriented_sample_prep_protocol . _Sample.Lyophilization_cryo_protectant . _Sample.Storage_protocol . loop_ _Sample_component.ID _Sample_component.Mol_common_name _Sample_component.Isotopic_labeling _Sample_component.Assembly_ID _Sample_component.Assembly_label _Sample_component.Entity_ID _Sample_component.Entity_label _Sample_component.Product_ID _Sample_component.Type _Sample_component.Concentration_val _Sample_component.Concentration_val_min _Sample_component.Concentration_val_max _Sample_component.Concentration_val_units _Sample_component.Concentration_val_err _Sample_component.Vendor _Sample_component.Vendor_product_name _Sample_component.Vendor_product_code _Sample_component.Entry_ID _Sample_component.Sample_ID 1 AfaE-dsc 'natural abundance' . . 1 $AfaE-dsc . . 30 . . uM . . . . 16417 2 2 'sodium acetate' 'natural abundance' . . . . . . 50 . . mM . . . . 16417 2 3 DAF [U-15N] . . 3 $DAF . . . 0 30 uM . . . . 16417 2 stop_ save_ save_sample_3 _Sample.Sf_category sample _Sample.Sf_framecode sample_3 _Sample.Entry_ID 16417 _Sample.ID 3 _Sample.Type solution _Sample.Sub_type . _Sample.Details . _Sample.Aggregate_sample_number . _Sample.Solvent_system H2O _Sample.Preparation_date . _Sample.Preparation_expiration_date . _Sample.Polycrystallization_protocol . _Sample.Single_crystal_protocol . _Sample.Crystal_grow_apparatus . _Sample.Crystal_grow_atmosphere . _Sample.Crystal_grow_details . _Sample.Crystal_grow_method . _Sample.Crystal_grow_method_cit_ID . _Sample.Crystal_grow_pH . _Sample.Crystal_grow_pH_range . _Sample.Crystal_grow_pressure . _Sample.Crystal_grow_pressure_esd . _Sample.Crystal_grow_seeding . _Sample.Crystal_grow_seeding_cit_ID . _Sample.Crystal_grow_temp . _Sample.Crystal_grow_temp_details . _Sample.Crystal_grow_temp_esd . _Sample.Crystal_grow_time . _Sample.Oriented_sample_prep_protocol . _Sample.Lyophilization_cryo_protectant . _Sample.Storage_protocol . loop_ _Sample_component.ID _Sample_component.Mol_common_name _Sample_component.Isotopic_labeling _Sample_component.Assembly_ID _Sample_component.Assembly_label _Sample_component.Entity_ID _Sample_component.Entity_label _Sample_component.Product_ID _Sample_component.Type _Sample_component.Concentration_val _Sample_component.Concentration_val_min _Sample_component.Concentration_val_max _Sample_component.Concentration_val_units _Sample_component.Concentration_val_err _Sample_component.Vendor _Sample_component.Vendor_product_name _Sample_component.Vendor_product_code _Sample_component.Entry_ID _Sample_component.Sample_ID 1 AfaE-dsc '[U-13C; U-15N]' . . 1 $AfaE-dsc . . 30 . . uM . . . . 16417 3 2 'sodium acetate' 'natural abundance' . . . . . . 50 . . mM . . . . 16417 3 3 DAF1234 [U-15N] . . 3 $DAF . . . 0 30 uM . . . . 16417 3 stop_ save_ save_sample_4 _Sample.Sf_category sample _Sample.Sf_framecode sample_4 _Sample.Entry_ID 16417 _Sample.ID 4 _Sample.Type solution _Sample.Sub_type . _Sample.Details . _Sample.Aggregate_sample_number . _Sample.Solvent_system H2O _Sample.Preparation_date . _Sample.Preparation_expiration_date . _Sample.Polycrystallization_protocol . _Sample.Single_crystal_protocol . _Sample.Crystal_grow_apparatus . _Sample.Crystal_grow_atmosphere . _Sample.Crystal_grow_details . _Sample.Crystal_grow_method . _Sample.Crystal_grow_method_cit_ID . _Sample.Crystal_grow_pH . _Sample.Crystal_grow_pH_range . _Sample.Crystal_grow_pressure . _Sample.Crystal_grow_pressure_esd . _Sample.Crystal_grow_seeding . _Sample.Crystal_grow_seeding_cit_ID . _Sample.Crystal_grow_temp . _Sample.Crystal_grow_temp_details . _Sample.Crystal_grow_temp_esd . _Sample.Crystal_grow_time . _Sample.Oriented_sample_prep_protocol . _Sample.Lyophilization_cryo_protectant . _Sample.Storage_protocol . loop_ _Sample_component.ID _Sample_component.Mol_common_name _Sample_component.Isotopic_labeling _Sample_component.Assembly_ID _Sample_component.Assembly_label _Sample_component.Entity_ID _Sample_component.Entity_label _Sample_component.Product_ID _Sample_component.Type _Sample_component.Concentration_val _Sample_component.Concentration_val_min _Sample_component.Concentration_val_max _Sample_component.Concentration_val_units _Sample_component.Concentration_val_err _Sample_component.Vendor _Sample_component.Vendor_product_name _Sample_component.Vendor_product_code _Sample_component.Entry_ID _Sample_component.Sample_ID 1 AfaE-dsc 'natural abundance' . . 1 $AfaE-dsc . . 30 . . uM . . . . 16417 4 2 'sodium acetate' 'natural abundance' . . . . . . 50 . . mM . . . . 16417 4 3 DAF1234 [U-15N] . . 2 $DAF1234 . . . 0 30 uM . . . . 16417 4 stop_ save_ ####################### # Sample conditions # ####################### save_sample_conditions_1 _Sample_condition_list.Sf_category sample_conditions _Sample_condition_list.Sf_framecode sample_conditions_1 _Sample_condition_list.Entry_ID 16417 _Sample_condition_list.ID 1 _Sample_condition_list.Details 'AfaE-III and AfaE-drsc' loop_ _Sample_condition_variable.Type _Sample_condition_variable.Val _Sample_condition_variable.Val_err _Sample_condition_variable.Val_units _Sample_condition_variable.Entry_ID _Sample_condition_variable.Sample_condition_list_ID pH 5.3 . pH 16417 1 pressure 1 . atm 16417 1 temperature 298 . K 16417 1 stop_ save_ ############################ # Computer software used # ############################ save_ARIA _Software.Sf_category software _Software.Sf_framecode ARIA _Software.Entry_ID 16417 _Software.ID 1 _Software.Name ARIA _Software.Version . _Software.Details . loop_ _Vendor.Name _Vendor.Address _Vendor.Electronic_address _Vendor.Entry_ID _Vendor.Software_ID 'Linge, O'Donoghue and Nilges' . . 16417 1 stop_ loop_ _Task.Task _Task.Entry_ID _Task.Software_ID 'data analysis' 16417 1 'structure solution' 16417 1 stop_ save_ save_TALOS _Software.Sf_category software _Software.Sf_framecode TALOS _Software.Entry_ID 16417 _Software.ID 2 _Software.Name TALOS _Software.Version . _Software.Details . loop_ _Vendor.Name _Vendor.Address _Vendor.Electronic_address _Vendor.Entry_ID _Vendor.Software_ID 'Cornilescu, Delaglio and Bax' . . 16417 2 stop_ loop_ _Task.Task _Task.Entry_ID _Task.Software_ID 'data analysis' 16417 2 stop_ save_ ######################### # Experimental detail # ######################### ################################## # NMR Spectrometer definitions # ################################## save_spectrometer_1 _NMR_spectrometer.Sf_category NMR_spectrometer _NMR_spectrometer.Sf_framecode spectrometer_1 _NMR_spectrometer.Entry_ID 16417 _NMR_spectrometer.ID 1 _NMR_spectrometer.Details 'NMR service at NIMR' _NMR_spectrometer.Manufacturer Varian _NMR_spectrometer.Model INOVA _NMR_spectrometer.Serial_number . _NMR_spectrometer.Field_strength 800 save_ save_NMR_spectrometer_list _NMR_spectrometer_list.Sf_category NMR_spectrometer_list _NMR_spectrometer_list.Sf_framecode NMR_spectrometer_list _NMR_spectrometer_list.Entry_ID 16417 _NMR_spectrometer_list.ID 1 loop_ _NMR_spectrometer_view.ID _NMR_spectrometer_view.Name _NMR_spectrometer_view.Manufacturer _NMR_spectrometer_view.Model _NMR_spectrometer_view.Serial_number _NMR_spectrometer_view.Field_strength _NMR_spectrometer_view.Details _NMR_spectrometer_view.Citation_ID _NMR_spectrometer_view.Citation_label _NMR_spectrometer_view.Entry_ID _NMR_spectrometer_view.NMR_spectrometer_list_ID 1 spectrometer_1 Varian INOVA . 800 'NMR service at NIMR' . . 16417 1 stop_ save_ ############################# # NMR applied experiments # ############################# save_experiment_list _Experiment_list.Sf_category experiment_list _Experiment_list.Sf_framecode experiment_list _Experiment_list.Entry_ID 16417 _Experiment_list.ID 1 _Experiment_list.Details . loop_ _Experiment.ID _Experiment.Name _Experiment.Raw_data_flag _Experiment.NMR_spec_expt_ID _Experiment.NMR_spec_expt_label _Experiment.MS_expt_ID _Experiment.MS_expt_label _Experiment.SAXS_expt_ID _Experiment.SAXS_expt_label _Experiment.FRET_expt_ID _Experiment.FRET_expt_label _Experiment.EMR_expt_ID _Experiment.EMR_expt_label _Experiment.Sample_ID _Experiment.Sample_label _Experiment.Sample_state _Experiment.Sample_volume _Experiment.Sample_volume_units _Experiment.Sample_condition_list_ID _Experiment.Sample_condition_list_label _Experiment.Sample_spinning_rate _Experiment.Sample_angle _Experiment.NMR_tube_type _Experiment.NMR_spectrometer_ID _Experiment.NMR_spectrometer_label _Experiment.NMR_spectrometer_probe_ID _Experiment.NMR_spectrometer_probe_label _Experiment.NMR_spectral_processing_ID _Experiment.NMR_spectral_processing_label _Experiment.Mass_spectrometer_ID _Experiment.Mass_spectrometer_label _Experiment.Xray_instrument_ID _Experiment.Xray_instrument_label _Experiment.Fluorescence_instrument_ID _Experiment.Fluorescence_instrument_label _Experiment.EMR_instrument_ID _Experiment.EMR_instrument_label _Experiment.Chromatographic_system_ID _Experiment.Chromatographic_system_label _Experiment.Chromatographic_column_ID _Experiment.Chromatographic_column_label _Experiment.Entry_ID _Experiment.Experiment_list_ID 1 '2D 1H-15N HNCO' no . . . . . . . . . . 1 $sample_1 isotropic . . 1 $sample_conditions_1 . . . 1 $spectrometer_1 . . . . . . . . . . . . . . . . 16417 1 2 '2D 1H-15N HSQC' no . . . . . . . . . . 2 $sample_2 isotropic . . 1 $sample_conditions_1 . . . 1 $spectrometer_1 . . . . . . . . . . . . . . . . 16417 1 3 '2D 1H-15N HNCO' no . . . . . . . . . . 3 $sample_3 isotropic . . 1 $sample_conditions_1 . . . 1 $spectrometer_1 . . . . . . . . . . . . . . . . 16417 1 4 '2D 1H-15N HSQC' no . . . . . . . . . . 4 $sample_4 isotropic . . 1 $sample_conditions_1 . . . 1 $spectrometer_1 . . . . . . . . . . . . . . . . 16417 1 stop_ save_ save_binding_data _Binding_value_list.Sf_category binding_data _Binding_value_list.Sf_framecode binding_data _Binding_value_list.Entry_ID 16417 _Binding_value_list.ID 1 _Binding_value_list.Sample_condition_list_ID 1 _Binding_value_list.Sample_condition_list_label $sample_conditions_1 _Binding_value_list.Details . _Binding_value_list.Text_data_format . _Binding_value_list.Text_data . loop_ _Binding_experiment.Experiment_ID _Binding_experiment.Experiment_name _Binding_experiment.Sample_ID _Binding_experiment.Sample_label _Binding_experiment.Sample_state _Binding_experiment.Entry_ID _Binding_experiment.Binding_value_list_ID 3 '2D 1H-15N HNCO' 3 $sample_3 isotropic 16417 1 4 '2D 1H-15N HSQC' 4 $sample_4 isotropic 16417 1 stop_ loop_ _Binding_software.Software_ID _Binding_software.Software_label _Binding_software.Method_ID _Binding_software.Method_label _Binding_software.Entry_ID _Binding_software.Binding_value_list_ID 1 $ARIA . . 16417 1 stop_ loop_ _Binding_result.ID _Binding_result.Experiment_ID _Binding_result.Assembly_ID _Binding_result.Atm_obs_assembly_atom_ID _Binding_result.Atm_obs_entity_assembly_ID _Binding_result.Atm_obs_entity_ID _Binding_result.Atm_obs_comp_index_ID _Binding_result.Atm_obs_seq_ID _Binding_result.Atm_obs_comp_ID _Binding_result.Atm_obs_atom_ID _Binding_result.Atm_obs_atom_type _Binding_result.Atm_obs_atom_isotope_number _Binding_result.Resonance_ID _Binding_result.Atm_obs_auth_entity_assembly_ID _Binding_result.Atm_obs_auth_seq_ID _Binding_result.Atm_obs_auth_comp_ID _Binding_result.Atm_obs_auth_atom_ID _Binding_result.Expt_observed_param _Binding_result.Val_type _Binding_result.Val _Binding_result.Val_err _Binding_result.Val_units _Binding_result.Entry_ID _Binding_result.Binding_value_list_ID 1 1 1 . 1 1 . . . . . . . . . . . 'chemical shifts' Kd 16 . uM 16417 1 2 2 1 . 1 1 . . . . . . . . . . . 'chemical shifts' Kd 16 . uM 16417 1 3 3 1 . 1 1 . . . . . . . . . . . 'chemical shifts' Kd 16 . uM 16417 1 4 4 1 . 1 1 . . . . . . . . . . . 'chemical shifts' Kd 16 . uM 16417 1 stop_ loop_ _Binding_partners.Binding_result_ID _Binding_partners.Assembly_ID _Binding_partners.Entity_assembly_ID _Binding_partners.Entity_assembly_name _Binding_partners.Entity_ID _Binding_partners.Entity_label _Binding_partners.Entry_ID _Binding_partners.Binding_value_list_ID 1 1 1 AfaE-dsc 1 $AfaE-dsc 16417 1 1 1 2 DAF1234 2 $DAF1234 16417 1 2 1 1 AfaE-dsc 1 $AfaE-dsc 16417 1 2 1 2 DAF1234 2 $DAF1234 16417 1 3 1 1 AfaE-dsc 1 $AfaE-dsc 16417 1 3 1 2 DAF1234 2 $DAF1234 16417 1 4 1 1 AfaE-dsc 1 $AfaE-dsc 16417 1 4 1 2 DAF1234 2 $DAF1234 16417 1 stop_ save_