** WaterRefCNS guide to results  **
	       ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~

 You've used WaterRefCNS script to do water refinement with CNS
 
 The scheme for results are as follow:

  o  All I/O files used/produced are stored for you to check in
     TempDir directory.  Once analyzed (if something went wrong) they 
     can be safely deleted).

  o  In order to check how the calculations were done you can check
     files in :
     
         refinedPDB     <--  final coordinates for refined models. Only
 	                     model coordinates (no water) are given
			     A file holding all refined models is created
			     with name  All_PROTNAME_cns 
	
         refinedPDB_w   <--  final coordinates, included water. Normally 
	                     used to see if the water box surronding the
		             protein looks OK.
 
  o Misc (other) files used/produced
        xplor_split     <--  Where the individual model coordinates used
                             are stored

        cnsPDB          <--  Coordinates in PDB format (CNS naming scheme)
                             actually used as input in the calculation.