Tag category Entity_db_link
Key tags (columns):
Tags in table Entity_db_link:
| Tag | Description | data type | Mandatory |
|---|---|---|---|
| Accession_code | Accession code for the entry in the database. | line | yes |
| Author_supplied | A code indicating that the link to a related database was provided by an author (yes) or obtained through another method (no). | yes_no | |
| Chimera_segment_ID | Code indicating if the listed database link is specific to the fragment of the entity described by the tag '_Entity.Fragment'. | int | |
| Database_code | Code assigned to a database. | line | yes |
| Entity_ID | Pointer to '_Entity.ID' | int | yes |
| Entry_details | Text providing additional information about the matching entry. | text | |
| Entry_experimental_method | For structural databases, the method used to determine the structure. | line | |
| Entry_ID | Pointer to '_Entry.ID' | code | yes |
| Entry_mol_code | Code assigned by the database to the molecule in the database entry. | line | |
| Entry_mol_name | Name of the molecular entity in the database entry. | line | |
| Entry_relation_type | A brief description of how the database entry is related to the molecular entity. | line | |
| Entry_structure_resolution | A value taken from the database that is a measure of the quality of the structure. | float | |
| Ordinal | An integer value used to maintain the order of the rows in the entity DB loop when reading and writing NMR-STAR files. | int | |
| Seq_align_begin | The sequence position in the database sequence at which the alignment with the sequence of the biopolymer studied begins. | code | |
| Seq_align_end | The sequence position in the database sequence at which the alignment with the sequence of the biopolymer studied. | code | |
| Seq_alignment_details | Text describing the alignment between the matched polymer sequences. | text | |
| Seq_difference_details | Text describing the differences in the sequences for the matched polymers. | text | |
| Seq_homology_expectation_val | The BLAST expectation value for the homology between the retrieved polymer and the molecular entity. | float | |
| Seq_identity | Number of residues in the retrieved sequence that have identical positions in the molecular entity determined by a homology alignment method. | float | |
| Seq_positive | Number of residues in the retrieved sequence where the corresponding residue in the molecular entity sequence has similar physical characteristics (hydrophobicity, charge, etc.) | float | |
| Seq_query_to_submitted_percent | In percent, the ratio of the length of retrieve sequence to the length of the sequence of the molecular entity. This value can be used to determine if the retrieved sequence is a subset or superset of the molecular entity. | float | |
| Seq_subject_length | Length of the polymer sequence retrieve from the database. | int | |
| Sf_ID | Pointer to '_Entity.Sf_ID' | int | yes |