BMRB Entry 923

Chem Shift validation: AVS_anomalous, AVS_full
BMRB Entry DOI: doi:10.13018/BMR923

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Nicholas Rego and David Koes
3Dmol.js: molecular visualization with WebGL
Bioinformatics (2015) 31 (8): 1322-1324 doi:10.1093/bioinformatics/btu829

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Title:

Assignment of Proton Resonances, Identification of Secondary Structural Elements, and Analysis of Backbone Chemical Shifts for the C102T Variant of Yeast Iso-1-cytochrome c and Horse Cytochrome c

Deposition date:

1995-07-31

Original release date:

1995-07-31

Authors:

Gao, Yuan; Boyd, Jonathan; Williams, Robert; Pielak, Gary

Citation:

Citation: Gao, Yuan; Boyd, Jonathan; Williams, Robert; Pielak, Gary. "Assignment of Proton Resonances, Identification of Secondary Structural Elements, and Analysis of Backbone Chemical Shifts for the C102T Variant of Yeast Iso-1-cytochrome c and Horse Cytochrome c" Biochemistry 29, 6994-7003 (1990).

Assembly members:

Assembly members:
cytochrome c, polymer, 108 residues, Formula weight is not available
HEME C, non-polymer, 618.503 Da.

Natural source:

Natural source: Common Name: yeast Taxonomy ID: 4932 Superkingdom: Eukaryota Kingdom: Fungi Genus/species: Saccharomyces cerevisiae

Experimental source:

Experimental source: Production method: not available

Entity Sequences (FASTA):

Entity Sequences (FASTA):
cytochrome c: TEFKAGSAKKGATLFKTRCL QCHTVEKGGPHKVGPNLHGI FGRHSGQAEGYSYTDANIKK NVLWDENNMSEYLTNPXKYI PGTKMAFGGLKKEKDRNDLI TYLKKATE

Data sets:

assigned_chemical_shifts
- chemical_shift_assignment_data_set_one

Data type	Count
1H chemical shifts	594

Additional metadata:

Assembly
Samples and Experiments
Software
Spectrometers
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Assembly:

Entity Assembly ID	Entity Name	Entity ID
1	cytochrome c	1
2	Heme C	2

Entities:

Entity 1, cytochrome c 108 residues - Formula weight is not available

1

THR

GLU

PHE

LYS

ALA

GLY

SER

ALA

LYS

2

GLY

ALA

THR

LEU

PHE

LYS

THR

ARG

CYS

LEU

3

GLN

CYS

HIS

THR

VAL

GLU

LYS

GLY

PRO

4

HIS

LYS

VAL

GLY

PRO

ASN

LEU

HIS

GLY

ILE

5

PHE

GLY

ARG

HIS

SER

GLY

GLN

ALA

GLU

GLY

6

TYR

SER

TYR

THR

ASP

ALA

ASN

ILE

LYS

7

ASN

VAL

LEU

TRP

ASP

GLU

ASN

MET

SER

8

GLU

TYR

LEU

THR

ASN

PRO

M3L

LYS

TYR

ILE

9

PRO

GLY

THR

LYS

MET

ALA

PHE

GLY

LEU

10

LYS

GLU

LYS

ASP

ARG

ASN

ASP

LEU

ILE

11

THR

TYR

LEU

LYS

ALA

THR

GLU

Entity 2, Heme C - C34 H34 Fe N4 O4 - 618.503 Da.

1

HEC

Samples:

sample_one: cytochrome c

sample_condition_set_one: pH: 7.2; temperature: 300 K

Experiments:

Name	Sample	Sample state	Sample conditions
Experiment Name	sample_one	not available	sample_condition_set_one

Software:

No software information available

NMR spectrometers:

unknown unknown 0 MHz