BMRB Entry 7292

Name: Backbone assignment of internal interaction site of ALP
Published: 2007-08-22

Chem Shift validation: AVS_full, LACS
BMRB Entry DOI: doi:10.13018/BMR7292

NMR-STAR file interactive viewer.
NMR-STAR v3 text file.
XML gzip file.
RDF gzip file.
All files associated with the entry

Nicholas Rego and David Koes
3Dmol.js: molecular visualization with WebGL
Bioinformatics (2015) 31 (8): 1322-1324 doi:10.1093/bioinformatics/btu829

Select model:

I am color blind

Download raw data. Direct link to this display. Help

Title:

Backbone assignment of internal interaction site of ALP

Deposition date:

2006-09-08

Original release date:

2007-08-22

Authors:

Alho, Nanna; Klaavuniemi, Tuula; Ylanne, Jari; Permi, Perttu; Mattila, Sampo

Citation:

Citation: Alho, Nanna; Klaavuniemi, Tuula; Ylanne, Jari; Permi, Perttu; Mattila, Sampo. "Backbone NMR assignment of the internal interaction site of ALP" Biomol. NMR Assignments 1, 85-87 (2007).
PubMed: 19636834

Assembly members:

Assembly members:
protein, polymer, 171 residues, Formula weight is not available

Natural source:

Natural source: Common Name: Human Taxonomy ID: 9606 Superkingdom: Eukaryota Kingdom: Metazoa Genus/species: Homo sapiens

Experimental source:

Experimental source: Production method: recombinant technology

Entity Sequences (FASTA):

Entity Sequences (FASTA):
protein: GAMGSEPQDGNYFEHKHNIR PKPFVIPGRSSGCSTPSGID CGSGRSTPSSVSTVSTICPG DLKVAAKLAPNIPLEMELPG VKIVHAQFNTPMQLYSDDNI METLQGQVSTALGETPLMSE PTASVPPESDVYRMLHDNRN EPTQPRQSGSFRVLQGMVDD GSDDRPAGTRS

Data sets:

assigned_chemical_shifts
- alp_chem_shift_list_1

Data type	Count
13C chemical shifts	484
15N chemical shifts	147
1H chemical shifts	147

Additional metadata:

Assembly
Samples and Experiments
Software
Spectrometers
Hide all

Assembly:

Entity Assembly ID	Entity Name	Entity ID
1	ALP	1

Entities:

Entity 1, ALP 171 residues - Formula weight is not available

1

GLY

ALA

MET

GLY

SER

GLU

PRO

GLN

ASP

GLY

2

ASN

TYR

PHE

GLU

HIS

LYS

HIS

ASN

ILE

ARG

3

PRO

LYS

PRO

PHE

VAL

ILE

PRO

GLY

ARG

SER

4

SER

GLY

CYS

SER

THR

PRO

SER

GLY

ILE

ASP

5

CYS

GLY

SER

GLY

ARG

SER

THR

PRO

SER

6

VAL

SER

THR

VAL

SER

THR

ILE

CYS

PRO

GLY

7

ASP

LEU

LYS

VAL

ALA

LYS

LEU

ALA

PRO

8

ASN

ILE

PRO

LEU

GLU

MET

GLU

LEU

PRO

GLY

9

VAL

LYS

ILE

VAL

HIS

ALA

GLN

PHE

ASN

THR

10

PRO

MET

GLN

LEU

TYR

SER

ASP

ASN

ILE

11

MET

GLU

THR

LEU

GLN

GLY

GLN

VAL

SER

THR

12

ALA

LEU

GLY

GLU

THR

PRO

LEU

MET

SER

GLU

13

PRO

THR

ALA

SER

VAL

PRO

GLU

SER

ASP

14

VAL

TYR

ARG

MET

LEU

HIS

ASP

ASN

ARG

ASN

15

GLU

PRO

THR

GLN

PRO

ARG

GLN

SER

GLY

SER

16

PHE

ARG

VAL

LEU

GLN

GLY

MET

VAL

ASP

17

GLY

SER

ASP

ARG

PRO

ALA

GLY

THR

ARG

18

SER

Samples:

ALP_asp: protein ALP, [U-13C; U-15N], 15 mM; amino acid aspartic acid 40 mM; buffer TRIS 20 mM; buffer NaCl 150 ± 5 mM

conditions_1: ionic strength: 150 mM; pH: 4; temperature: 300 K

Experiments:

Name	Sample	Sample state	Sample conditions
15N-HSQC	ALP_asp	not available	conditions_1
HNCA	ALP_asp	not available	conditions_1
HNCOCA	ALP_asp	not available	conditions_1
HNCO	ALP_asp	not available	conditions_1
HNCACO	ALP_asp	not available	conditions_1
HNCACB	ALP_asp	not available	conditions_1
CBCACONH	ALP_asp	not available	conditions_1
iHNCA	ALP_asp	not available	conditions_1

Software:

No software information available

NMR spectrometers:

Varian Innova 800 MHz

DBJ	BAD96686 BAG36063
GB	AAB96665 AAC16670 EAX04641 EHH26344 EHH54109
REF	NP_055291 XP_002815395 XP_003823529 XP_003899472 XP_004040756
SP	Q53GG5
AlphaFold	Q53GG5