BMRB Entry 7279

Chem Shift validation: AVS_full, LACS
BMRB Entry DOI: doi:10.13018/BMR7279

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Nicholas Rego and David Koes
3Dmol.js: molecular visualization with WebGL
Bioinformatics (2015) 31 (8): 1322-1324 doi:10.1093/bioinformatics/btu829

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Title:

NMR resonance assignments of the human non-chromitin architectural transcription factor HMGA1

Deposition date:

2006-08-29

Original release date:

2006-09-05

Authors:

Buchko, Garry; Ni, Shuisong; Reeves, Raymond; Kennedy, Michael

Citation:

Citation: Buchko, Garry; Ni, Shuisong; Lourette, Natacha; Reeves, Raymond; Kennedy, Michael. "NMR resonance assignments of the human high mobility group protein HMGA1." J. Biomol. NMR 38, 185-185 (2007).
PubMed: 17206468

Assembly members:

Assembly members:
HMGA1, polymer, 107 residues, Formula weight is not available

Natural source:

Natural source: Common Name: Human Taxonomy ID: 9606 Superkingdom: Eukaryota Kingdom: Metazoa Genus/species: Homo sapiens

Experimental source:

Experimental source: Production method: recombinant technology Vector: pET-24

Entity Sequences (FASTA):

Entity Sequences (FASTA):
HMGA1: MSESSSKSSQPLASKQEKDG TEKRGRGRPRKQPPVSPGTA LVGSQKEPSEVPTPKRPRGR PKGSKNKGAAKTRKTTTTPG RKPRGRPKKLEKEEEEGISQ ESSEEEQ

Data sets:

assigned_chemical_shifts
- chem_shift_list_1

Data type	Count
13C chemical shifts	344
15N chemical shifts	89
1H chemical shifts	251

Additional metadata:

Assembly
Samples and Experiments
Software
Spectrometers
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Assembly:

Entity Assembly ID	Entity Name	Entity ID
1	HMGA1	1

Entities:

Entity 1, HMGA1 107 residues - Formula weight is not available

1

MET

SER

GLU

SER

LYS

SER

GLN

2

PRO

LEU

ALA

SER

LYS

GLN

GLU

LYS

ASP

GLY

3

THR

GLU

LYS

ARG

GLY

ARG

GLY

ARG

PRO

ARG

4

LYS

GLN

PRO

VAL

SER

PRO

GLY

THR

ALA

5

LEU

VAL

GLY

SER

GLN

LYS

GLU

PRO

SER

GLU

6

VAL

PRO

THR

PRO

LYS

ARG

PRO

ARG

GLY

ARG

7

PRO

LYS

GLY

SER

LYS

ASN

LYS

GLY

ALA

8

LYS

THR

ARG

LYS

THR

PRO

GLY

9

ARG

LYS

PRO

ARG

GLY

ARG

PRO

LYS

LEU

10

GLU

LYS

GLU

GLY

ILE

SER

GLN

11

GLU

SER

GLU

GLN

Samples:

sample_1: HMGA1, [U-15N; U-13C], 2 ± 0.2 mM; potassium phosphate 20 mM; EDTA 1 mM

conditions_1: pH: 6.0; temperature: 298 K

Experiments:

Name	Sample	Sample state	Sample conditions
2D HSQC	not available	not available	not available
3D HNCA	not available	not available	not available
3D HNCOCA	not available	not available	not available
3D HNCOCA	not available	not available	not available
3D CBCA(CO)NH	not available	not available	not available
3D HNCACB	not available	not available	not available
3D HNCO	not available	not available	not available
3D HNN	not available	not available	not available
3D CCC-TOCSY	not available	not available	not available
3D 15N-edited NOESY	not available	not available	not available

Software:

No software information available

NMR spectrometers:

Varian Inova 900 MHz
Varian Inova 750 MHz
Varian Inova 600 MHz
Varian UnityPlus 500 MHz

DBJ	BAE32952 BAE42398 BAE91504 BAG62962 BAJ20344
EMBL	CAA33080
GB	AAA35998 AAA88072 AAB00145 AAD53889 AAF06666
REF	NP_001003387 NP_001020598 NP_001034445 NP_001159948 NP_001160007
SP	P17095 P17096 Q6URC2 Q9QXP3
AlphaFold	P17095 P17096 Q6URC2 Q9QXP3