BMRB Entry 7244

Name: 1H, 15N, 13C&#039;, 13CA and 13CB Chemical Shift Assignments of intrinsically disordered gamma-synuclein
Published: 2006-11-06

Chem Shift validation: AVS_full, LACS
BMRB Entry DOI: doi:10.13018/BMR7244

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Nicholas Rego and David Koes
3Dmol.js: molecular visualization with WebGL
Bioinformatics (2015) 31 (8): 1322-1324 doi:10.1093/bioinformatics/btu829

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Title:

1H, 15N, 13C', 13CA and 13CB Chemical Shift Assignments of intrinsically disordered gamma-synuclein

Deposition date:

2006-07-25

Original release date:

2006-11-06

Authors:

Marsh, Joseph; Singh, Vinay; Zongchao, Jia; Forman-Kay, Julie

Citation:

Citation: Marsh, Joseph; Singh, Vinay; Zongchao, Jia; Forman-Kay, Julie. "Sensitivity of secondary structure propensities to sequence differences between a- and g-synuclein: Implications for fibrillation" Protein Sci. 15, 2795-2804 (2006).
PubMed: 17088319

Assembly members:

Assembly members:
gamma-synuclein, polymer, 127 residues, Formula weight is not available

Natural source:

Natural source: Common Name: Human Taxonomy ID: 9606 Superkingdom: Eukaryota Kingdom: Metazoa Genus/species: Homo sapiens

Experimental source:

Experimental source: Production method: recombinant technology

Entity Sequences (FASTA):

Entity Sequences (FASTA):
gamma-synuclein: MDVFKKGFSIAKEGVVGAVE KTKQGVTEAAEKTKEGVMYV GAKTKENVVQSVTSVAEKTK EQANAVSEAVVSSVNTVATK TVEEAENIAVTSGVVRKEDL RPSAPQQEGEASKEKEEVAE EAQSGGD

Data sets:

assigned_chemical_shifts
- chem_shift_list_1

Data type	Count
13C chemical shifts	364
15N chemical shifts	125
1H chemical shifts	125

Additional metadata:

Assembly
Samples and Experiments
Software
Spectrometers
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Assembly:

Entity Assembly ID	Entity Name	Entity ID
1	gamma-synuclein monomer	1

Entities:

Entity 1, gamma-synuclein monomer 127 residues - Formula weight is not available

1

MET

ASP

VAL

PHE

LYS

GLY

PHE

SER

ILE

2

ALA

LYS

GLU

GLY

VAL

GLY

ALA

VAL

GLU

3

LYS

THR

LYS

GLN

GLY

VAL

THR

GLU

ALA

4

GLU

LYS

THR

LYS

GLU

GLY

VAL

MET

TYR

VAL

5

GLY

ALA

LYS

THR

LYS

GLU

ASN

VAL

GLN

6

SER

VAL

THR

SER

VAL

ALA

GLU

LYS

THR

LYS

7

GLU

GLN

ALA

ASN

ALA

VAL

SER

GLU

ALA

VAL

8

VAL

SER

VAL

ASN

THR

VAL

ALA

THR

LYS

9

THR

VAL

GLU

ALA

GLU

ASN

ILE

ALA

VAL

10

THR

SER

GLY

VAL

ARG

LYS

GLU

ASP

LEU

11

ARG

PRO

SER

ALA

PRO

GLN

GLU

GLY

GLU

12

ALA

SER

LYS

GLU

LYS

GLU

VAL

ALA

GLU

13

GLU

ALA

GLN

SER

GLY

ASP

Samples:

sample_1: gamma-synuclein, [U-13C; U-15N], 0.35 mM; NaCl 137 mM; KCl 2.7 mM; Na2HPO4 10 mM; K2HPO4 2.4 mM; D20 10%

conditions_1: pH: 7.4; temperature: 278 K

Experiments:

Name	Sample	Sample state	Sample conditions
HNCACB	sample_1	not available	conditions_1
HNCO	sample_1	not available	conditions_1

Software:

No software information available

NMR spectrometers:

Varian INOVA 800 MHz

DBJ	BAD97087 BAG35077 BAG73792
EMBL	CAG46587 CAG46589
GB	AAB64109 AAC27738 AAC36550 AAC36586 AAH14098
REF	NP_003078 XP_002820773 XP_003828245 XP_003951754 XP_004049763
SP	O76070
AlphaFold	O76070