BMRB Entry 7207

Chem Shift validation: AVS_full, LACS, SPARTA
BMRB Entry DOI: doi:10.13018/BMR7207

NMR-STAR file interactive viewer.
NMR-STAR v3 text file.
XML gzip file.
RDF gzip file.
All files associated with the entry

Title:
NMR assignments of the truncated human zeta-COP
Deposition date:
2006-07-04
Original release date:
2008-06-05
Authors:
Yu, Wenyu; Xia, Bin; Jin, Changwen
Citation:

Citation: Yu, Wenyu; Jin, Changwen; Xia, Bin. "1H, 13C, and 15N resonance assignments of human zeta-COP"  Biomol. NMR Assignments 2, 73-75 (2008).
PubMed: 19636929

Assembly members:

Assembly members:
Coatomer zeta-1 subunit, polymer, 149 residues, Formula weight is not available

Natural source:

Natural source:   Common Name: Human   Taxonomy ID: 9606   Superkingdom: Eukaryota   Kingdom: Metazoa   Genus/species: Homo sapiens

Experimental source:

Experimental source:   Production method: recombinant technology

Entity Sequences (FASTA):

Entity Sequences (FASTA):
Coatomer zeta-1 subunit: MEALILEPSLYTVKAILILD NDGDRLFAKYYDDTYPSVKE QKAFEKNIFNKTHRTDSEIA LLEGLTVVYKSSIDLYFYVI GSSYENELMLMAVLNCLFDS LSQMLRKNVEKRALLENMEG LFLAVDEIVDGGVILESDPQ QVVHRVALR

Data sets:
Data typeCount
13C chemical shifts645
15N chemical shifts150
1H chemical shifts1079

Additional metadata:

  • Assembly
  • Samples and Experiments
  • Software
  • Spectrometers
  • Hide all

Assembly:

Entity Assembly IDEntity NameEntity ID
1human zeta-COP1

Entities:

Entity 1, human zeta-COP 149 residues - Formula weight is not available

1   METGLUALALEUILELEUGLUPROSERLEU
2   TYRTHRVALLYSALAILELEUILELEUASP
3   ASNASPGLYASPARGLEUPHEALALYSTYR
4   TYRASPASPTHRTYRPROSERVALLYSGLU
5   GLNLYSALAPHEGLULYSASNILEPHEASN
6   LYSTHRHISARGTHRASPSERGLUILEALA
7   LEULEUGLUGLYLEUTHRVALVALTYRLYS
8   SERSERILEASPLEUTYRPHETYRVALILE
9   GLYSERSERTYRGLUASNGLULEUMETLEU
10   METALAVALLEUASNCYSLEUPHEASPSER
11   LEUSERGLNMETLEUARGLYSASNVALGLU
12   LYSARGALALEULEUGLUASNMETGLUGLY
13   LEUPHELEUALAVALASPGLUILEVALASP
14   GLYGLYVALILELEUGLUSERASPPROGLN
15   GLNVALVALHISARGVALALALEUARG

Samples:

sample_1: Coatomer zeta-1 subunit, [U-13C; U-15N], 1.5 mM; Potassium phosphate 20 mM; NaCl 50 mM; EDTA 1 mM; DTT 20 mM; PMSF 10 mM; sodium azide 0.01%; H2O 90%; D2O 10%

conditions_1: pH: 7.0; temperature: 298 K

Experiments:

NameSampleSample stateSample conditions
2D 15N HSQCsample_1not availableconditions_1
3D HNCOsample_1not availableconditions_1
3D HN(CA)COsample_1not availableconditions_1
3D HNCAsample_1not availableconditions_1
3D HNCACBsample_1not availableconditions_1
3D CBCA(CO)NHsample_1not availableconditions_1
3D HBHA(CO)NHsample_1not availableconditions_1
3D HBHANHsample_1not availableconditions_1
3D HCCH-TOCSYsample_1not availableconditions_1
3D HCCH-COSYsample_1not availableconditions_1
3D HCCH-COSYsample_1not availableconditions_1
3D (H)CCH-TOCSYsample_1not availableconditions_1
3D (H)CCH-COSYsample_1not availableconditions_1

Software:

No software information available

NMR spectrometers:

  • Bruker DRX 600 MHz
  • Bruker Avance 800 MHz

Related Database Links:

PDB
DBJ BAA90303 BAB17659 BAB22703 BAC39030 BAD96908
EMBL CAA53539 CAH93014
GB AAD34115 AAF29144 AAH02849 AAH25041 AAH58524
PRF 2004374A
REF NP_001101587 NP_001127620 NP_001258663 NP_001258664 NP_001258665
SP P35604 P61923 P61924 Q5R5F2
TPG DAA30050
AlphaFold P35604 P61923 P61924 Q5R5F2

Download HSQC peak lists in one of the following formats:
CSV: Backbone or all simulated peaks
SPARKY: Backbone or all simulated peaks