BMRB Entry 7201

Name: Backbone 1H, 13C, and 15N Chemical Shift Assignments for Bacillus subtilis YqbF
Published: 2006-08-16

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PDB ID: 2hjq
Entry in NMR Restraints Grid
Validation report in NRG-CING
Chem Shift validation: AVS_anomalous, AVS_full, LACS
BMRB Entry DOI: doi:10.13018/BMR7201
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Nicholas Rego and David Koes
3Dmol.js: molecular visualization with WebGL
Bioinformatics (2015) 31 (8): 1322-1324 doi:10.1093/bioinformatics/btu829

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Title:

Backbone 1H, 13C, and 15N Chemical Shift Assignments for Bacillus subtilis YqbF

Deposition date:

2006-06-29

Original release date:

2006-08-16

Authors:

Ramelot, Theresa; Kennedy, Michael; Cort, John

Citation:

Citation: Ramelot, Theresa; Kennedy, Michael; Cort, John. "NMR structure of YqfB from Bacillus sbutilis" The BMRB entry is the only known published source for the data..

Assembly members:

Assembly members:
YqfB, polymer, 111 residues, Formula weight is not available

Natural source:

Natural source: Common Name: Bacillus subtilis Taxonomy ID: 1423 Superkingdom: Eubacteria Kingdom: not available Genus/species: Bacillus subtilis

Experimental source:

Experimental source: Production method: recombinant technology Vector: PET21

Entity Sequences (FASTA):

Entity Sequences (FASTA):
YqfB: MFTAKLIKGKTYNVMGITFR AGVSQTVPKKLYEYLNENPY FILTQELNNQKDDPINYTES ELKGMNKAEHESIISNLGRN PSDFKNADERIAYILKQIDN KGELEHHHHHH

Data sets:

assigned_chemical_shifts
- chem_shift_list_1

Data type	Count
13C chemical shifts	477
15N chemical shifts	121
1H chemical shifts	767

Additional metadata:

Assembly
Samples and Experiments
Software
Spectrometers
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Assembly:

Entity Assembly ID	Entity Name	Entity ID
1	YqbF	1

Entities:

Entity 1, YqbF 111 residues - Formula weight is not available

C-term: LEHHHHHH

1

MET

PHE

THR

ALA

LYS

LEU

ILE

LYS

GLY

LYS

2

THR

TYR

ASN

VAL

MET

GLY

ILE

THR

PHE

ARG

3

ALA

GLY

VAL

SER

GLN

THR

VAL

PRO

LYS

4

LEU

TYR

GLU

TYR

LEU

ASN

GLU

ASN

PRO

TYR

5

PHE

ILE

LEU

THR

GLN

GLU

LEU

ASN

GLN

6

LYS

ASP

PRO

ILE

ASN

TYR

THR

GLU

SER

7

GLU

LEU

LYS

GLY

MET

ASN

LYS

ALA

GLU

HIS

8

GLU

SER

ILE

SER

ASN

LEU

GLY

ARG

ASN

9

PRO

SER

ASP

PHE

LYS

ASN

ALA

ASP

GLU

ARG

10

ILE

ALA

TYR

ILE

LEU

LYS

GLN

ILE

ASP

ASN

11

LYS

GLY

GLU

LEU

GLU

HIS

12

HIS

Samples:

sample_1: YqfB, [U-100% 13C; U-100% 15N], 1.3 mM; NH4Oac 20 mM; NaCL 100 mM; DTT 10 mM; CaCl2 5 mM

conditions_1: ionic strength: 100 mM; pH: 5.5; temperature: 298 K

Experiments:

Name	Sample	Sample state	Sample conditions
1H15N HSQC	sample_1	isotropic	conditions_1

Software:

No software information available

NMR spectrometers:

Varian Inova 600 MHz
Varian Inova 750 MHz

PDB	2HJQ
DBJ	BAA06939 BAA12401 BAM58678
EMBL	CAB14554 CCU57216 CEI57837 CEJ78259
GB	AGG62013 AHA78498 AIC41068 AIC45300 AIY93937
REF	NP_390490 WP_003229923 WP_032725189 YP_007534596 YP_008830707
SP	P45922
AlphaFold	P45922