BMRB Entry 7193

Name: Sequence specific resonance assignments of a hypothetical protein PA1123 (NESG ID: PaT4) from Pseudomonas aeruginosa
Published: 2006-08-11

Chem Shift validation: AVS_anomalous, AVS_full, LACS
BMRB Entry DOI: doi:10.13018/BMR7193

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Nicholas Rego and David Koes
3Dmol.js: molecular visualization with WebGL
Bioinformatics (2015) 31 (8): 1322-1324 doi:10.1093/bioinformatics/btu829

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Title:

Sequence specific resonance assignments of a hypothetical protein PA1123 (NESG ID: PaT4) from Pseudomonas aeruginosa

Deposition date:

2006-06-27

Original release date:

2006-08-11

Authors:

Srisailam, Sampath; Lemak, Alexander; Yee, Adelinda; Lukin, Jonathan; Arrowsmith, Cheryl

Citation:

Citation: Srisailam, Sampath; Lemak, Alexander; Yee, Adelinda; Lukin, Jonathan; Arrowsmith, Cheryl. "Sequence specific assignment of a hypothetical protein PA1123 (NESG ID: PaT4) from Pseudomonas aeruginosa" The BMRB entry is the only known published source for the data..

Assembly members:

Assembly members:
hypothetical protein, polymer, 106 residues, Formula weight is not available

Natural source:

Natural source: Common Name: Pseudomonas aeruginosa Taxonomy ID: 287 Superkingdom: Eubacteria Kingdom: not available Genus/species: Pseudomonas aeruginosa

Experimental source:

Experimental source: Production method: recombinant technology

Entity Sequences (FASTA):

Entity Sequences (FASTA):
hypothetical protein: MSITSTDICQAADALKGFVG FNRKTGRYIVRFSEDSFGMD VADDSITPTSEFVWSSVRDD VMRLGREQLQILLEQNINER LNIGEPLLVYLRRQDLPEIT AQRQLR

Data sets:

assigned_chemical_shifts
- chem_shift_list_1

Data type	Count
13C chemical shifts	434
15N chemical shifts	108
1H chemical shifts	714

Additional metadata:

Assembly
Samples and Experiments
Software
Spectrometers
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Assembly:

Entity Assembly ID	Entity Name	Entity ID
1	PA1123	1

Entities:

Entity 1, PA1123 106 residues - Formula weight is not available

1

MET

SER

ILE

THR

SER

THR

ASP

ILE

CYS

GLN

2

ALA

ASP

ALA

LEU

LYS

GLY

PHE

VAL

GLY

3

PHE

ASN

ARG

LYS

THR

GLY

ARG

TYR

ILE

VAL

4

ARG

PHE

SER

GLU

ASP

SER

PHE

GLY

MET

ASP

5

VAL

ALA

ASP

SER

ILE

THR

PRO

THR

SER

6

GLU

PHE

VAL

TRP

SER

VAL

ARG

ASP

7

VAL

MET

ARG

LEU

GLY

ARG

GLU

GLN

LEU

GLN

8

ILE

LEU

GLU

GLN

ASN

ILE

ASN

GLU

ARG

9

LEU

ASN

ILE

GLY

GLU

PRO

LEU

VAL

TYR

10

LEU

ARG

GLN

ASP

LEU

PRO

GLU

ILE

THR

11

ALA

GLN

ARG

GLN

LEU

ARG

Samples:

sample_1: hypothetical protein, [U-15N; U-13C], 1 ± 0.1 mM; Buffer 10 ± 0.05 mM; Salt 400 ± 0.05 mM; DTT 10 ± 0.05 mM; NaN3 0.01 ± 0.001 %; Benzamidine 1 ± 0.001 mM

conditions_1: pH: 6.5; temperature: 300 K

Experiments:

Name	Sample	Sample state	Sample conditions
1H15N_HSQC	sample_1	not available	conditions_1
1H13C-HSQC	sample_1	not available	conditions_1
HNCO	sample_1	not available	conditions_1
HNCA	sample_1	not available	conditions_1
CCTOCSY NH	sample_1	not available	conditions_1
HCCTOCSY NH	sample_1	not available	conditions_1
HC(C)H-TOCSY	sample_1	not available	conditions_1
HCC(H)-TOCSY	sample_1	not available	conditions_1
15N-NOESY	sample_1	not available	conditions_1
13C-NOESY	sample_1	not available	conditions_1

Software:

SPARKY v3.95 -

NMR spectrometers:

Varian INOVA 600 MHz

PDB	2HG6
DBJ	BAK88853 BAP20595 BAP52175 GAA16659 GAJ52478
EMBL	CAW28951 CCQ87904 CDH72324 CDH78589 CDI89265
GB	AAG04512 ABJ10291 ABR86109 AEO76390 AFM66282
REF	NP_249814 WP_003082265 WP_003157837 WP_003163119 WP_023129052