BMRB Entry 7187

Name: NMR asigment of Ct-ole e 9, C terminal domain from the olive allergen Ole e 9
Published: 2006-10-02

Chem Shift validation: AVS_anomalous, AVS_full, LACS
BMRB Entry DOI: doi:10.13018/BMR7187

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Nicholas Rego and David Koes
3Dmol.js: molecular visualization with WebGL
Bioinformatics (2015) 31 (8): 1322-1324 doi:10.1093/bioinformatics/btu829

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Title:

NMR asigment of Ct-ole e 9, C terminal domain from the olive allergen Ole e 9

Deposition date:

2006-06-21

Original release date:

2006-10-02

Authors:

Castrillo, Ines; Trevino, Miguel; Palomares, Oscar; Villalba, Mayte; Rodriguez, Rosalia; Rico, Manuel; Santoro, Jorge; Bruix, Marta

Citation:

Citation: Castrillo, Ines; Trevino, Miguel; Palomares, Oscar; Rico, Manuel; Santoro, Jorge; Bruix, Marta. "NMR assignment of the C-terminal domain of Ole e 9, a major allergen of olive tree pollen" J. Biomol. NMR 36, 67-67 (2006).
PubMed: 17031524

Assembly members:

Assembly members:
rCtD, polymer, 101 residues, Formula weight is not available

Natural source:

Natural source: Common Name: olive tree Taxonomy ID: 4146 Superkingdom: Eukaryota Kingdom: Viridiplantae Genus/species: Olea europea

Experimental source:

Experimental source: Production method: recombinant technology Vector: pPICZ-alpha a

Entity Sequences (FASTA):

Entity Sequences (FASTA):
rCtD: ATPTPTPKAAGSWCVPKPGV SDDQLTGNINYACSQGIDCG PIQPGGACFEPNTVKAHAAY VMNLYYQHAGRNSWNCDFSQ TATLTNTNPSYGACNFPSGS N

Data sets:

assigned_chemical_shifts
- SHIFTSOlee9

Data type	Count
13C chemical shifts	376
15N chemical shifts	102
1H chemical shifts	618

Additional metadata:

Assembly
Samples and Experiments
Software
Spectrometers
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Assembly:

Entity Assembly ID	Entity Name	Entity ID
1	Ct ole e 9	1

Entities:

Entity 1, Ct ole e 9 101 residues - Formula weight is not available

1

ALA

THR

PRO

THR

PRO

THR

PRO

LYS

ALA

2

GLY

SER

TRP

CYS

VAL

PRO

LYS

PRO

GLY

VAL

3

SER

ASP

GLN

LEU

THR

GLY

ASN

ILE

ASN

4

TYR

ALA

CYS

SER

GLN

GLY

ILE

ASP

CYS

GLY

5

PRO

ILE

GLN

PRO

GLY

ALA

CYS

PHE

GLU

6

PRO

ASN

THR

VAL

LYS

ALA

HIS

ALA

TYR

7

VAL

MET

ASN

LEU

TYR

GLN

HIS

ALA

GLY

8

ARG

ASN

SER

TRP

ASN

CYS

ASP

PHE

SER

GLN

9

THR

ALA

THR

LEU

THR

ASN

THR

ASN

PRO

SER

10

TYR

GLY

ALA

CYS

ASN

PHE

PRO

SER

GLY

SER

11

ASN

Samples:

13C15Nolee9-H2O: rCtD, [U-13C; U-15N], 0.7 mM; H20 90%; D20 10%

15Nolee9-H2O: rCtD, [U-15N], 0.7 mM; H20 90%; D20 10%

olee9-H2O: rCtD 0.7 mM; H20 90%; D20 10%

olee9-D2O: rCtD 0.7 mM; D20 100%

conditions_1: pH: 6; temperature: 298 K

Experiments:

Name	Sample	Sample state	Sample conditions
1H15N13C HNCA	not available	not available	conditions_1
1H15N13C HNCOCA	not available	not available	conditions_1
1H15N13C CBCANH	not available	not available	conditions_1
1H15N13C CBCACONH	not available	not available	conditions_1
1H15N HSQC	not available	not available	conditions_1
1H13C HSQC	not available	not available	conditions_1
1H13C HCCH TOCSY	not available	not available	conditions_1
1H TOCSY	not available	not available	conditions_1
multiplicity edited 1H13C HSQC	not available	not available	conditions_1
1H15N NOESY HSQC	not available	not available	conditions_1
1H13C NOESY HSQC	not available	not available	conditions_1
1H COSY	not available	not available	conditions_1
1H NOESY	not available	not available	conditions_1

Software:

TOPSPIN v1.3, Bruker -

SPARKY v3.111 -

xwinnmr, Bruker -

NMR spectrometers:

Bruker AV-800 800 MHz
Bruker AV-600 600 MHz

PDB	2JON
GB	AAK58515
SP	Q94G86
AlphaFold	Q94G86