BMRB Entry 7137

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PDB ID:
Entry in NMR Restraints Grid
Validation report in NRG-CING
Chem Shift validation: AVS_full, LACS
BMRB Entry DOI: doi:10.13018/BMR7137
MolProbity Validation Chart

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Title:
NMR assignments of the C-terminal domain of insulin-like growth factor binding protein 2 (IGFBP-2)
Deposition date:
2006-06-02
Original release date:
2006-10-30
Authors:
KUANG, ZHIHE; YAO, SHENGGEN; KEIZER, DAVID; WANG, CHUNXIAO; BACH, LEON; FORBES, BRIONY; WALLACE, JOHN; NORTON, RAYMOND
Citation:

Citation: KUANG, ZHIHE; YAO, SHENGGEN; KEIZER, DAVID; WANG, CHUNXIAO; BACH, LEON; FORBES, BRIONY; WALLACE, JOHN; NORTON, RAYMOND. "Structure, Dynamics and Heparin Binding of the C-terminal Domain of Insulin-like Growth Factor-binding Protein-2 (IGFBP-2)"  J. Mol. Biol. 364, 690-701 (2006).
PubMed: 17020769

Assembly members:

Assembly members:
IGFBP-2, polymer, 107 residues, Formula weight is not available

Natural source:

Natural source:   Common Name: Human   Taxonomy ID: 9606   Superkingdom: Eukaryota   Kingdom: Metazoa   Genus/species: Homo sapiens

Experimental source:

Experimental source:   Production method: recombinant technology   Vector: pET32a

Entity Sequences (FASTA):

Entity Sequences (FASTA):
IGFBP-2: GPPPARTPCQQELDQVLERI STMRLPDERGPLEHLYSLHI PNCDKHGLYNLKQCKMSLNG QRGECWCVNPNTGKLIQGAP TIRGDPECHLFYNEQQEARG VHTQRMQ

Data sets:
Data typeCount
13C chemical shifts427
15N chemical shifts94
1H chemical shifts634

Additional metadata:

  • Assembly
  • Samples and Experiments
  • Software
  • Spectrometers
  • Hide all

Assembly:

Entity Assembly IDEntity NameEntity ID
1C-TERMINAL DOMAIN OF INSULIN-LIKE GROWTH FACTOR BINDING PROTEIN 21

Entities:

Entity 1, C-TERMINAL DOMAIN OF INSULIN-LIKE GROWTH FACTOR BINDING PROTEIN 2 107 residues - Formula weight is not available

1   GLYPROPROPROALAARGTHRPROCYSGLN
2   GLNGLULEUASPGLNVALLEUGLUARGILE
3   SERTHRMETARGLEUPROASPGLUARGGLY
4   PROLEUGLUHISLEUTYRSERLEUHISILE
5   PROASNCYSASPLYSHISGLYLEUTYRASN
6   LEULYSGLNCYSLYSMETSERLEUASNGLY
7   GLNARGGLYGLUCYSTRPCYSVALASNPRO
8   ASNTHRGLYLYSLEUILEGLNGLYALAPRO
9   THRILEARGGLYASPPROGLUCYSHISLEU
10   PHETYRASNGLUGLNGLNGLUALAARGGLY
11   VALHISTHRGLNARGMETGLN

Samples:

sample_1: IGFBP-2, [U-95% 15N], 0.8 mM; Na acetate 10 mM; azide 0.02%; D2O 5%

sample_2: IGFBP-2, [U-95% 13C; U-90% 15N], 0.5 mM; Na acetate 10 mM; azide 0.02%; D2O 5%

conditions_1: ionic strength: 0.01 M; pH: 6.0; temperature: 298 K

Experiments:

NameSampleSample stateSample conditions
1H15N_HSQCnot availablenot availableconditions_1
1H13C_HSQCnot availablenot availableconditions_1
1H15N_NOESY-HSQCnot availablenot availableconditions_1
1H13C_NOESY-HSQCnot availablenot availableconditions_1
HNCAnot availablenot availableconditions_1
HN(CO)CAnot availablenot availableconditions_1
HNCOnot availablenot availableconditions_1
CBCA(CO)NHnot availablenot availableconditions_1
HNCACBnot availablenot availableconditions_1
HNHAnot availablenot availableconditions_1
HBHA(CO)NHnot availablenot availableconditions_1
HCCH-TOCSYnot availablenot availableconditions_1
CNH-NOESY-HSQCnot availablenot availableconditions_1

Software:

xwinnmr v3.5 -

XEASY v1.3 -

NMR spectrometers:

  • BRUKER AVANCE 500 MHz
  • BRUKER DRX 600 MHz

Related Database Links:

PDB
EMBL CAA34373
GB AAA03246 AAA36048 AAB22308 AAB23135 AAC48728
PRF 1812291A
REF NP_000588 NP_001009436 NP_776980 NP_999168 XP_001087071
SP P13384 P18065 P24853 Q29400
TPG DAA32390
AlphaFold P13384 P18065 P24853 Q29400

Download HSQC peak lists in one of the following formats:
CSV: Backbone or all simulated peaks
SPARKY: Backbone or all simulated peaks