BMRB Entry 7087

Name: 1H, 13C and 15N Assignments of the Dengue-4 Envelope Protein Domain III
Published: 2006-10-02

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PDB ID: 2h0p
Entry in NMR Restraints Grid
Validation report in NRG-CING
Chem Shift validation: AVS_full, LACS
BMRB Entry DOI: doi:10.13018/BMR7087
MolProbity Validation Chart

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Bioinformatics (2015) 31 (8): 1322-1324 doi:10.1093/bioinformatics/btu829

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Title:

1H, 13C and 15N Assignments of the Dengue-4 Envelope Protein Domain III

Deposition date:

2006-04-24

Original release date:

2006-10-02

Authors:

Volk, David; Lee, Yi-Chien; Li, Xin; Beasley, David; Barrett, Alan; Gorenstein, David

Citation:

Citation: Volk, David; Lee, Yi-Chien; Li, Xin; Barrett, Alan; Gorenstein, David. "NMR Assignment of the Dengue-4 Virus Envelope Protein Domain III" J. Biomol. NMR 36, 62-62 (2006).
PubMed: 17131034

Assembly members:

Assembly members:
D4ED3, polymer, 112 residues, Formula weight is not available

Natural source:

Natural source: Common Name: Dengue-4 virus strain 703-4 Taxonomy ID: 12637 Superkingdom: Viruses Kingdom: not available Genus/species: Flaviviridae Dengue-4

Experimental source:

Experimental source: Production method: recombinant technology

Entity Sequences (FASTA):

Entity Sequences (FASTA):
D4ED3: MEKLRIKGMSYTMCSGKFSI DKEMAETQHGTTVVKVKYEG AGAPCKVPIEIRDVNKEKVV GRIISSTPLAENTNSVTNIE LEPPFGDSYIVIGVGNSALT LHWFRKGSSIGK

Data sets:

assigned_chemical_shifts
- chem_shift_list_1

Data type	Count
13C chemical shifts	379
15N chemical shifts	86
1H chemical shifts	649

Additional metadata:

Assembly
Samples and Experiments
Software
Spectrometers
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Assembly:

Entity Assembly ID	Entity Name	Entity ID
1	D4ED3 Monomer	1

Entities:

Entity 1, D4ED3 Monomer 112 residues - Formula weight is not available

1

MET

GLU

LYS

LEU

ARG

ILE

LYS

GLY

MET

SER

2

TYR

THR

MET

CYS

SER

GLY

LYS

PHE

SER

ILE

3

ASP

LYS

GLU

MET

ALA

GLU

THR

GLN

HIS

GLY

4

THR

VAL

LYS

VAL

LYS

TYR

GLU

GLY

5

ALA

GLY

ALA

PRO

CYS

LYS

VAL

PRO

ILE

GLU

6

ILE

ARG

ASP

VAL

ASN

LYS

GLU

LYS

VAL

7

GLY

ARG

ILE

SER

THR

PRO

LEU

ALA

8

GLU

ASN

THR

ASN

SER

VAL

THR

ASN

ILE

GLU

9

LEU

GLU

PRO

PHE

GLY

ASP

SER

TYR

ILE

10

VAL

ILE

GLY

VAL

GLY

ASN

SER

ALA

LEU

THR

11

LEU

HIS

TRP

PHE

ARG

LYS

GLY

SER

ILE

12

GLY

LYS

Samples:

sample_1: D4ED3, [U-13C; U-15N], 0.6 ± 0.05 mM

conditions_1: pH: 7.5; temperature: 298 K

Experiments:

Name	Sample	Sample state	Sample conditions
HNCA	sample_1	not available	conditions_1
HNCO	sample_1	not available	conditions_1
HNHA	sample_1	not available	conditions_1
HNCACB	sample_1	not available	conditions_1
CBCACONH	sample_1	not available	conditions_1
HCCONH	sample_1	not available	conditions_1
CCONH	sample_1	not available	conditions_1
HCCH-TOCSY	sample_1	not available	conditions_1
HCCH-TOCSY centered on aromatic C13	sample_1	not available	conditions_1
HBCBCGCDHD	sample_1	not available	conditions_1
HBCBCGCDHDHE	sample_1	not available	conditions_1
NOESY-HSQC (N15)	sample_1	not available	conditions_1
TOCSY-HSQC (N15)	sample_1	not available	conditions_1
1H,C13-HSQC	sample_1	not available	conditions_1
1H,N15-HSQC	sample_1	not available	conditions_1
HCACOCANH	sample_1	not available	conditions_1

Software:

No software information available

NMR spectrometers:

Varian Inova 800 MHz
Varian Inova 700 MHz
Varian UnityPlus 600 MHz

PDB	2H0P 3UAJ 3UYP 3WE1 4AM0 4CBF
DBJ	BAC77234 BAC77235 BAC77236 BAC77238 BAC77239
EMBL	CAD21677 CAD21678 CAD21679 CAD21680 CAD21681
GB	AAA42964 AAB70676 AAB70677 AAB70678 AAB70679
PIR	GNWVDF
REF	NP_073286 NP_740317
SP	P09866 Q2YHF0 Q58HT7 Q5UCB8
AlphaFold	P09866 Q2YHF0 Q58HT7 Q5UCB8