BMRB Entry 7075

Name: Assignment of conserved hypothetical protein pa2412
Published: 2006-10-20

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PDB ID: 2gpf
Entry in NMR Restraints Grid
Validation report in NRG-CING
Chem Shift validation: AVS_anomalous, AVS_full, LACS
BMRB Entry DOI: doi:10.13018/BMR7075
MolProbity Validation Chart

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Bioinformatics (2015) 31 (8): 1322-1324 doi:10.1093/bioinformatics/btu829

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Title:

Assignment of conserved hypothetical protein pa2412

Deposition date:

2006-04-17

Original release date:

2006-10-20

Authors:

Lemak, Alexander; Yee, Adelinda; Lukin, Jonathan; Semesi, Anthony; Arrowsmith, Cheryl

Citation:

Citation: Lemak, Alexander; Lukin, Jonathan; Yee, Adelinda; Semesi, Anthony; Arrowsmith, Cheryl. "Solution structure of pa2412 protein determined using ABACUS protocol" The BMRB entry is the only known published source for the data..

Assembly members:

Assembly members:
conserved hypothetical protein pa2412, polymer, 72 residues, 8443 Da.

Natural source:

Natural source: Common Name: Pseudomonas aeruginosa Taxonomy ID: 15597608 Superkingdom: Bacteria Kingdom: not available Genus/species: pseudomonas aeruginosa

Experimental source:

Experimental source: Production method: recombinant technology Host organism: Escherichia coli Vector: P11

Entity Sequences (FASTA):

Entity Sequences (FASTA):
conserved hypothetical protein pa2412: MTSVFDRDDIQFQVVVNHEE QYSIWPEYKEIPQGWRAAGK SGLKKDCLAYIEEVWTDMRP LSLRQHMDKAAG

Data sets:

assigned_chemical_shifts
- chemical_shift_1

Data type	Count
13C chemical shifts	285
15N chemical shifts	70
1H chemical shifts	459

Additional metadata:

Assembly
Samples and Experiments
Software
Spectrometers
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Assembly:

Entity Assembly ID	Entity Name	Entity ID
1	pa2412	1

Entities:

Entity 1, pa2412 72 residues - 8443 Da.

1

MET

THR

SER

VAL

PHE

ASP

ARG

ASP

ILE

2

GLN

PHE

GLN

VAL

ASN

HIS

GLU

3

GLN

TYR

SER

ILE

TRP

PRO

GLU

TYR

LYS

GLU

4

ILE

PRO

GLN

GLY

TRP

ARG

ALA

GLY

LYS

5

SER

GLY

LEU

LYS

ASP

CYS

LEU

ALA

TYR

6

ILE

GLU

VAL

TRP

THR

ASP

MET

ARG

PRO

7

LEU

SER

LEU

ARG

GLN

HIS

MET

ASP

LYS

ALA

8

ALA

GLY

Samples:

sample_1: conserved hypothetical protein pa2412, [U-13C; U-15N], 0.6 mM; NaCl 450 mM; MOPS 10 mM

cond_set1: ionic strength: 0.45 M; pH: 6.5; temperature: 298 K

Experiments:

Name	Sample	Sample state	Sample conditions
15N HSQC	not available	not available	not available
HNCO	not available	not available	not available
CBCAcoNH	not available	not available	not available
HBHAcoNH	not available	not available	not available
CCcoNH TOCSY	not available	not available	not available
HCCcoNH TOCSY	not available	not available	not available
13C HSQC	not available	not available	not available
HC(C)H TOCSY	not available	not available	not available
HCC(H) TOCSY	not available	not available	not available
15N NOESY	not available	not available	not available
13C NOESY	not available	not available	not available

Software:

SPARKY v3.106 - assignemt, spectral analysis

NMR spectrometers:

Bruker AVANCE 600 MHz
Bruker AVANCE 500 MHz

PDB	2GPF 2PST
DBJ	BAK90265 BAP23198 BAP50810 GAA18000 GAJ51291
EMBL	CAW27611 CCQ87246 CDH74417 CDH77199 CDI90691
GB	AAG05800 AAT50634 ABJ11588 ABR86930 AEO75113
REF	NP_251102 WP_003089636 WP_023084226 WP_033996385 WP_034025318