BMRB Entry 7073

Title:
Structure Determination of a New Protein (PF1455) from Backbone-Centered NMR Data and NMR-Assisted Structure Prediction
Deposition date:
2006-04-18
Original release date:
2006-06-27
Authors:
Prestegard, James; Bansal, Sonal
Citation:

Citation: Mayer, Kristen; Qu, Ying; Bansal, Sonal; LeBlond, Peter; Jenney, Frank; Brereton, P.; Adams, Mike; Xu, Ying; Prestegard, James. "Structure determination of a new protein from backbone-centered NMR data and NMR-assisted structure prediction"  Proteins 65, 480-489 (2006).
PubMed: 16927360

Assembly members:

Assembly members:
PF1455, polymer, 82 residues, Formula weight is not available

Natural source:

Natural source:   Common Name: Pyrococcus furiosus   Taxonomy ID: 2261   Superkingdom: Archaea   Kingdom: not available   Genus/species: Pyrococcus furiosus

Experimental source:

Experimental source:   Production method: recombinant technology

Entity Sequences (FASTA):

Data sets:
Data typeCount
13C chemical shifts69
15N chemical shifts68
1H chemical shifts112
coupling constants59
residual dipolar couplings172

Additional metadata:

  • Assembly
  • Samples and Experiments
  • Software
  • Spectrometers
  • Hide all

Assembly:

Entity Assembly IDEntity NameEntity ID
1Pfam1

Entities:

Entity 1, Pfam 82 residues - Formula weight is not available

1   ALAHISHISHISHISHISHISGLYSERLYS
2   TRPILELYSPHETHRTHRASNLEUTHRPRO
3   GLUGLUALALYSILEVALGLNTYRGLULEU
4   SERTHRARGASPGLUPHETYRARGVALPHE
5   ILEASNPROTYRALALYSVALALAGLUVAL
6   VALILEASPASPSERLYSVALASNILEGLU
7   GLULEULYSGLULYSLEULYSGLYGLUVAL
8   ILEGLUGLULYSGLUILETHRLEUGLUGLU
9   LEUILE

Samples:

sample_3: PF1455, [U-15N; U-16% 13C], 1.2 mM; Tris 20 mM; NaCl 70 mM; C12E5/hexanol 3%

sample_1: PF1455, [U-15N], 2 mM; Tris 20 mM; NaCl 70 mM

sample_2: PF1455, [U-15N; U-16% 13C], 1.14 mM; Tris 11 mM; NaCl 40 mM; Phage 10 mg/ml

conditions_1: pH: 7.0; temperature: 298 K

Experiments:

NameSampleSample stateSample conditions
1H15N IPAP HSQC_(example)not availablenot availablenot available
HNHAnot availablenot availableconditions_1
soft HNCA ECOSYnot availablenot availableconditions_1
NOESY-15N editednot availablenot availableconditions_1

Software:

No software information available

NMR spectrometers:

  • Varian Inova 600 MHz

Related Database Links:

PDB
GB AAL81579 AFN04238
REF NP_579184 WP_011012602 YP_006492530

Download HSQC peak lists in one of the following formats:
CSV: Backbone or all simulated peaks
SPARKY: Backbone or all simulated peaks