BMRB Entry 6993

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PDB ID: 2cef
Entry in NMR Restraints Grid
Validation report in NRG-CING
Chem Shift validation: AVS_full
BMRB Entry DOI: doi:10.13018/BMR6993
MolProbity Validation Chart

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Nicholas Rego and David Koes
3Dmol.js: molecular visualization with WebGL
Bioinformatics (2015) 31 (8): 1322-1324 doi:10.1093/bioinformatics/btu829

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Title:

Phosphorylation of Cytoplasmic Tail of Tissue Factor and its Role in Modulating Structure and Binding Affinity.

Deposition date:

2006-02-17

Original release date:

2007-06-20

Authors:

Sen, Mehmet; Agrawal, Sameer; Craft, John; Ruf, Wolfram; Legge, Glen

Citation:

Citation: Sen, Mehmet; Herzik, Mark; Craft, John; Creath, Andrea; Agrawal, Sameer; Ruf, Wolfram; Legge, Glen. "Spectroscopic Characterization of Successive Phosphorylation of the Tissue Factor Cytoplasmic Region" Open Spectrosc J. 3, 58-64 (2009).
PubMed: 20076769

Assembly members:

Assembly members:
TFPP, polymer, 19 residues, 2218.3 Da.

Natural source:

Natural source: Common Name: Human Taxonomy ID: 9606 Superkingdom: Eukaryota Kingdom: Metazoa Genus/species: Homo sapiens

Experimental source:

Experimental source: Production method: chemical synthesis

Entity Sequences (FASTA):

Entity Sequences (FASTA):
TFPP: CRKAGVGQXWKENXPLNVS

Data sets:

assigned_chemical_shifts
- chem_shift_list_1

Data type	Count
13C chemical shifts	33
15N chemical shifts	18
1H chemical shifts	117

Additional metadata:

Assembly
Samples and Experiments
Software
Spectrometers
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Assembly:

Entity Assembly ID	Entity Name	Entity ID
1	TFPP, trans conformer	1
2	TFPP, cis conformer	1

Entities:

Entity 1, TFPP, trans conformer 19 residues - 2218.3 Da.

1

CYS

ARG

LYS

ALA

GLY

VAL

GLY

GLN

SEP

TRP

2

LYS

GLU

ASN

SEP

PRO

LEU

ASN

VAL

SER

Samples:

sample_1: TFPP 6 ± 0.05 mM; D2O 10%

conditions_of_TFPP: ionic strength: 0 mM; pH: 6.0; pressure: 1 atm; temperature: 285 K

Experiments:

Name	Sample	Sample state	Sample conditions
TOCSY	sample_1	not available	conditions_of_TFPP
IP-COSY	sample_1	not available	conditions_of_TFPP
ROESY	sample_1	not available	conditions_of_TFPP
1H1H_NOESY	sample_1	not available	conditions_of_TFPP
1H15N_HSQC	sample_1	not available	conditions_of_TFPP
1H13C_HSQC	sample_1	not available	conditions_of_TFPP

Software:

NMRView - NMRView was used for Assignment

NMRPipe - NMR data Processing

NMR spectrometers:

Bruker Avance 800 MHz
Bruker Avance 600 MHz

Download HSQC peak lists in one of the following formats:
CSV: Backbone or all simulated peaks
SPARKY: Backbone or all simulated peaks