BMRB Entry 6939

Name: Backbone 1H, 13C, and 15N Chemical Shift Assignments for Ubiquitin Specific Protease 7
Published: 2006-04-05

Chem Shift validation: AVS_full, LACS
BMRB Entry DOI: doi:10.13018/BMR6939

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Nicholas Rego and David Koes
3Dmol.js: molecular visualization with WebGL
Bioinformatics (2015) 31 (8): 1322-1324 doi:10.1093/bioinformatics/btu829

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Title:

Backbone 1H, 13C, and 15N Chemical Shift Assignments for Ubiquitin Specific Protease 7

Deposition date:

2006-01-13

Original release date:

2006-04-05

Authors:

Sheng, Yi; Saridakis, Vivian; Liao, Jack; Frappier, Lori; Arrowsmith, Cheryl

Citation:

Citation: Saridakis, V.; Sheng, Yi; Sarkari, F.; Holowaty, M.N.; Shire, F.; Nguyen, T.; Zhang, R.G.; Liao, F.; Lee, W.; Edwards, A.M.; Arrowsmith, Cheryl; Frappier, L.. "'1H,15N and 13C Assigned Chemical Shifts for USP7 in a complex with an EBNA1 peptide" Mol. Cell 18, 25-36 (2005).
PubMed: 15808506

Assembly members:

Assembly members:
USP7, polymer, 144 residues, Formula weight is not available
EBNA1, polymer, . residues, Formula weight is not available

Natural source:

Natural source: Common Name: Human Taxonomy ID: 9606 Superkingdom: Eukaryota Kingdom: Metazoa Genus/species: Homo sapien

Experimental source:

Experimental source: Production method: recombinant technology

Entity Sequences (FASTA):

Entity Sequences (FASTA):
USP7: DTSWRSEATFQFTVERFSRL SESVLSPPCFVRNLPWKIMV MPRFYPDRPHQKSVGFFLQC NAESDSTSWSCHAQAVLKII NYRDDEKSFSRRISHLFFHK ENDWGFSNFMAWSEVTDPEK GFIDDDKVTFEVFVQADAPH GVAW

Data sets:

assigned_chemical_shifts
- chem_shift_list_1

Data type	Count
13C chemical shifts	252
15N chemical shifts	123
1H chemical shifts	123

Additional metadata:

Assembly
Samples and Experiments
Software
Spectrometers
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Assembly:

Entity Assembly ID	Entity Name	Entity ID
1	USP7	1
2	EBNA1	2

Entities:

Entity 1, USP7 144 residues - Formula weight is not available

1

ASP

THR

SER

TRP

ARG

SER

GLU

ALA

THR

PHE

2

GLN

PHE

THR

VAL

GLU

ARG

PHE

SER

ARG

LEU

3

SER

GLU

SER

VAL

LEU

SER

PRO

CYS

PHE

4

VAL

ARG

ASN

LEU

PRO

TRP

LYS

ILE

MET

VAL

5

MET

PRO

ARG

PHE

TYR

PRO

ASP

ARG

PRO

HIS

6

GLN

LYS

SER

VAL

GLY

PHE

LEU

GLN

CYS

7

ASN

ALA

GLU

SER

ASP

SER

THR

SER

TRP

SER

8

CYS

HIS

ALA

GLN

ALA

VAL

LEU

LYS

ILE

9

ASN

TYR

ARG

ASP

GLU

LYS

SER

PHE

SER

10

ARG

ILE

SER

HIS

LEU

PHE

HIS

LYS

11

GLU

ASN

ASP

TRP

GLY

PHE

SER

ASN

PHE

MET

12

ALA

TRP

SER

GLU

VAL

THR

ASP

PRO

GLU

LYS

13

GLY

PHE

ILE

ASP

LYS

VAL

THR

PHE

14

GLU

VAL

PHE

VAL

GLN

ALA

ASP

ALA

PRO

HIS

15

GLY

VAL

ALA

TRP

Entity 2, EBNA1 - Formula weight is not available

Samples:

sample_1: USP7, [U-95% 13C; U-90% 15N], 0.7 mM; EBNA1 3 mM; sodium phosphate 20 mM; sodium chloride 250 mM

conditions_1: pH: 7.4; temperature: 303 K

Experiments:

Name	Sample	Sample state	Sample conditions
H-15N HSQC	sample_1	not available	conditions_1
HNCACB	sample_1	not available	conditions_1
CCCTOCSYNNH	sample_1	not available	conditions_1
HSQC	sample_1	not available	conditions_1

Software:

No software information available

NMR spectrometers:

Varian Inova 500 MHz
Varian Inova 600 MHz

PDB	1YY6 1YZE 2F1W 2F1X 2F1Y 2F1Z 2FOJ 2FOO 2FOP 2XXN 3MQR 3MQS 4JJQ 4KG9
DBJ	BAE22671 BAH13721 BAH13801 BAH13828 BAH13841
EMBL	CAA96580
GB	AAI66012 AAI66690 AAQ12339 AAQ82908 AAT68666
REF	NP_001003918 NP_001019961 NP_001129152 NP_001273386 NP_001273387
SP	Q4VSI4 Q6A4J8 Q93009
TPG	DAA15729
AlphaFold	Q4VSI4 Q6A4J8 Q93009