BMRB Entry 6923

Name: Backbone 1H, 13C, and 15N resonance assignments of the N-terminal domain of FKBP38 (FKBP38NTD)
Published: 2007-01-29

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PDB ID: 2mf9
Entry in NMR Restraints Grid
Validation report in NRG-CING
Chem Shift validation: AVS_full, LACS
BMRB Entry DOI: doi:10.13018/BMR6923
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Nicholas Rego and David Koes
3Dmol.js: molecular visualization with WebGL
Bioinformatics (2015) 31 (8): 1322-1324 doi:10.1093/bioinformatics/btu829

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Title:

Backbone 1H, 13C, and 15N resonance assignments of the N-terminal domain of FKBP38 (FKBP38NTD)

Deposition date:

2005-12-12

Original release date:

2007-01-29

Authors:

Kang, Cong Bao; Ye, Hong; Vivekanandan, Subramanian; Yoon, Ho Sup

Citation:

Citation: Kang, Cong Bao; Ye, Hong; Chia, Joel; Choi, Bo-Hwa; Dhe-Paganon, Sirano; Simon, Bernd; Schutz, Ulrike; Sattler, Michael; Yoon, Ho Sup. "Functional role of the flexible N-terminal extension of FKBP38 in catalysis" Sci. Rep. 3, .-. (2013).
PubMed: 24145868

Assembly members:

Assembly members:
FKBP38, polymer, 157 residues, Formula weight is not available

Natural source:

Natural source: Common Name: Human Taxonomy ID: 9606 Superkingdom: Eukaryota Kingdom: Metazoa Genus/species: Homo sapiens

Experimental source:

Experimental source: Production method: recombinant technology Vector: pET29

Entity Sequences (FASTA):

Entity Sequences (FASTA):
FKBP38: MGQPPAEEAEQPGALAREFL AAMEPEPAPAPAPEEWLDIL GNGLLRKKTLVPGPPGSSRP VKGQVVTVHLQTSLENGTRV QEEPELVFTLGDCDVIQALD LSVPLMDVGETAMVTADSKY CYGPQGSRSPYIPPHAALCL EVTLKTAVDLEHHHHHH

Data sets:

assigned_chemical_shifts
- chem_shift_list_1

Data type	Count
13C chemical shifts	610
15N chemical shifts	138
1H chemical shifts	1009

Additional metadata:

Assembly
Samples and Experiments
Software
Spectrometers
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Assembly:

Entity Assembly ID	Entity Name	Entity ID
1	FKBP38	1

Entities:

Entity 1, FKBP38 157 residues - Formula weight is not available

1

MET

GLY

GLN

PRO

ALA

GLU

ALA

GLU

2

GLN

PRO

GLY

ALA

LEU

ALA

ARG

GLU

PHE

LEU

3

ALA

MET

GLU

PRO

GLU

PRO

ALA

PRO

ALA

4

PRO

ALA

PRO

GLU

TRP

LEU

ASP

ILE

LEU

5

GLY

ASN

GLY

LEU

ARG

LYS

THR

LEU

6

VAL

PRO

GLY

PRO

GLY

SER

ARG

PRO

7

VAL

LYS

GLY

GLN

VAL

THR

VAL

HIS

LEU

8

GLN

THR

SER

LEU

GLU

ASN

GLY

THR

ARG

VAL

9

GLN

GLU

PRO

GLU

LEU

VAL

PHE

THR

LEU

10

GLY

ASP

CYS

ASP

VAL

ILE

GLN

ALA

LEU

ASP

11

LEU

SER

VAL

PRO

LEU

MET

ASP

VAL

GLY

GLU

12

THR

ALA

MET

VAL

THR

ALA

ASP

SER

LYS

TYR

13

CYS

TYR

GLY

PRO

GLN

GLY

SER

ARG

SER

PRO

14

TYR

ILE

PRO

HIS

ALA

LEU

CYS

LEU

15

GLU

VAL

THR

LEU

LYS

THR

ALA

VAL

ASP

LEU

16

GLU

HIS

Samples:

15N-FKBP38: FKBP38, [U-15N], 0.3 – 0.5 mM; Na-PO4 20 mM; NaCl 10 mM; DTT 1 mM; Na3N 1 mM; D2O 10%

15N_13C-FKBP38: FKBP38, [U-13C; U-15N], 0.3 – 0.5 mM; Na-PO4 20 mM; NaCl 10 mM; DTT 1 mM; Na3N 1 mM; D2O 10%

condition_15N13C-FKBP38: pH: 7; temperature: 303 K

Experiments:

Name	Sample	Sample state	Sample conditions
1H15N_HSQC	not available	not available	condition_15N13C-FKBP38
3D_HNCA	not available	not available	condition_15N13C-FKBP38
3D_HN(CO)CA	not available	not available	condition_15N13C-FKBP38
3D_HNCO	not available	not available	condition_15N13C-FKBP38
3D_HNCACB	not available	not available	condition_15N13C-FKBP38
3D_CBCA(CO)NH	not available	not available	condition_15N13C-FKBP38

Software:

No software information available

NMR spectrometers:

Bruker Avance 700 MHz

BMRB	6902
PDB	2AWG 2D9F 2F2D 2MF9 3EY6
DBJ	BAD96558 BAG36163 BAG72557 BAH13306
EMBL	CAD98028 CAL37783
GB	AAB00102 AAC28753 AAH09966 AAO39020 AAQ84561
REF	NP_001247999 NP_036313 XP_002761955 XP_002828980 XP_002828981
SP	Q14318
AlphaFold	Q14318