BMRB Entry 6890
Chem Shift validation: AVS_anomalous, AVS_full
BMRB Entry DOI: doi:10.13018/BMR6890
NMR-STAR file interactive viewer.
NMR-STAR v3 text file.
XML gzip file.
RDF gzip file.
All files associated with the entry
Citation: Kanelis, Voula; Bruce, M.; Skrynnikov, Nikolai; Rotin, D.; Forman-Kay, Julie. "Structural Determinants for High-Affinity Binding in a Nedd4 WW3* Domain-Comm PY Motif Complex" Structure (Cambridge MA U.S.) 14, 543-553 (2006).
PubMed: 16531238
Assembly members:
dNedd4 WW3* domain, polymer, 46 residues, 5155.4 Da.
Comm LPSY Peptide, polymer, 11 residues, 1203.4 Da.
Natural source: Common Name: Fruit fly Taxonomy ID: 7227 Superkingdom: Eukaryota Kingdom: Metazoa Genus/species: Drosophila melanogaster
Experimental source: Production method: recombinant technology
Entity Sequences (FASTA):
dNedd4 WW3* domain: GPLGSGEEEPLPPRWSMQVA
PNGRTFFIDHASRRTTWIDP
RNGRAS
Comm LPSY Peptide: TGLPSYDEALH
- assigned_chemical_shifts
| Data type | Count |
| 13C chemical shifts | 151 |
| 15N chemical shifts | 46 |
| 1H chemical shifts | 307 |
Additional metadata:
Assembly:
| Entity Assembly ID | Entity Name | Entity ID |
|---|---|---|
| 1 | dNedd4 WW3* domain | 1 |
| 2 | Comm LPSY peptide | 2 |
Entities:
Entity 1, dNedd4 WW3* domain 46 residues - 5155.4 Da.
| 1 | GLY | PRO | LEU | GLY | SER | GLY | GLU | GLU | GLU | PRO | ||||
| 2 | LEU | PRO | PRO | ARG | TRP | SER | MET | GLN | VAL | ALA | ||||
| 3 | PRO | ASN | GLY | ARG | THR | PHE | PHE | ILE | ASP | HIS | ||||
| 4 | ALA | SER | ARG | ARG | THR | THR | TRP | ILE | ASP | PRO | ||||
| 5 | ARG | ASN | GLY | ARG | ALA | SER |
Entity 2, Comm LPSY peptide 11 residues - 1203.4 Da.
| 1 | THR | GLY | LEU | PRO | SER | TYR | ASP | GLU | ALA | LEU | ||||
| 2 | HIS |
Samples:
sample_1: dNedd4 WW3* domain, [U-15N; U-13C], 1.1 mM; Comm LPSY Peptide 1.1 mM; Na phos 10 mM; NaCl 20 mM; D2O 10%
sample_2: dNedd4 WW3* domain, [U-15N; U-13C], 1.1 mM; Comm LPSY Peptide 1.1 mM; Na phos 10 mM; NaCl 20 mM; D2O 100%
sample_3: dNedd4 WW3* domain, [U-15N; U-13C], 1.0 mM; Comm LPSY Peptide 1.4 mM; Na phos 10 mM; NaCl 20 mM; D2O 10%
sample_4: dNedd4 WW3* domain, [U-15N; U-13C], 1.0 mM; Comm LPSY Peptide 1.4 mM; Na phos 10 mM; NaCl 20 mM; D2O 100%
conditions_1_and_conditions_3: pH: 7.0; temperature: 288 K
conditions_2_and_conditions_4: pH*: 7.0; temperature: 288 K
Experiments:
| Name | Sample | Sample state | Sample conditions |
|---|---|---|---|
| 15N-HSQC | not available | not available | not available |
| 13C-HSQC | not available | not available | not available |
| HNCaCb | not available | not available | not available |
| (Hb)CbCa(CO)NNH | not available | not available | not available |
| CCC-TOCSY-NNH | not available | not available | not available |
| HCC-TOCSY-NNH | not available | not available | not available |
| HCCH-COSY | not available | not available | not available |
| HMBC | not available | not available | not available |
| (Hb)Cb(CgCd)Hd | not available | not available | not available |
| (Hb)Cb(CgCdCe)He | not available | not available | not available |
| 13C F1-filtered, F3-edited NOESY-HSQC, 250 ms | not available | not available | not available |
| 13C/15N-edited NOESY-HSQC, 175 ms | not available | not available | not available |
| 13C/15N F1,F2-filtered NOESY, 140 ms | not available | not available | not available |
| 13C/15N F1,F2-filtered TOCSY | not available | not available | not available |
| 13C/15N F1,F2-filtered COSY | not available | not available | not available |
Software:
NMRPipe/NMRDraw v2.3 -
NMRView v5.2.2 -
NMRDraw -
NMR spectrometers:
- Varian Inova 500 MHz
Download HSQC peak lists in one of the following formats:
CSV: Backbone
or all simulated peaks
SPARKY: Backbone
or all simulated peaks