BMRB Entry 6865

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PDB ID:
Entry in NMR Restraints Grid
Validation report in NRG-CING
Chem Shift validation: AVS_anomalous, AVS_full, LACS
BMRB Entry DOI: doi:10.13018/BMR6865
MolProbity Validation Chart

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Title:
1H, 13C, and 15N chemical shift assignments for P. falciparum TRAP-TSR domain
Deposition date:
2005-10-18
Original release date:
2006-08-07
Authors:
Tossavainen, Helena; Permi, Perttu; Kilpelainen, Ilkka
Citation:

Citation: Tossavainen, Helena; Pihlajamaa, Tero; Huttunen, Toni; Raulo, Erkki; Rauvala, Heikki; Permi, Perttu; Kilpelainen, Ilkka. "The layered fold of the TSR domain of P. falciparum TRAP contains a heparin binding site"  Protein Sci. 15, 1760-1768 (2006).
PubMed: 16815922

Assembly members:

Assembly members:
TRAP-TSR domain, polymer, 49 residues, Formula weight is not available

Natural source:

Natural source:   Common Name: Plasmodium falciparum   Taxonomy ID: 5833   Superkingdom: Eukaryota   Kingdom: not available   Genus/species: Plasmodium falciparum

Experimental source:

Experimental source:   Production method: recombinant technology

Entity Sequences (FASTA):

Entity Sequences (FASTA):
TRAP-TSR domain: GSASCGVWDEWSPCSVTCGK GTRSRKREILHEGCTSEIQE QCEEERCPP

Data sets:
Data typeCount
13C chemical shifts150
15N chemical shifts51
1H chemical shifts304

Additional metadata:

  • Assembly
  • Samples and Experiments
  • Software
  • Spectrometers
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Assembly:

Entity Assembly IDEntity NameEntity ID
1TRAP-TSR domain1

Entities:

Entity 1, TRAP-TSR domain 49 residues - Formula weight is not available

1   GLYSERALASERCYSGLYVALTRPASPGLU
2   TRPSERPROCYSSERVALTHRCYSGLYLYS
3   GLYTHRARGSERARGLYSARGGLUILELEU
4   HISGLUGLYCYSTHRSERGLUILEGLNGLU
5   GLNCYSGLUGLUGLUARGCYSPROPRO

Samples:

sample_1: TRAP-TSR domain, [U-13C; U-15N], 0.5 mM

conditions_1: pH: 6.6; temperature: 283 K

Experiments:

NameSampleSample stateSample conditions
HNCACBsample_1not availableconditions_1
CBCA(CO)NHsample_1not availableconditions_1
HNCOsample_1not availableconditions_1
CC(CO)NHsample_1not availableconditions_1
HCCH-COSYsample_1not availableconditions_1
1H-15N-HSQCsample_1not availableconditions_1
1H-13C-HSQCsample_1not availableconditions_1

Software:

SPARKY v3.106 - assignment

NMR spectrometers:

  • Varian Inova 600 MHz
  • Varian Inova 800 MHz

Related Database Links:

BMRB 16456
PDB
DBJ BAA31173 BAA31174 BAA31178 BAA31191 BAA31192
EMBL CAA31440 CAE46497
GB AAA29774 AAC18657 AAW78130 AAW78131 AAW78136
PRF 1411304A 1708291A
SP P16893
AlphaFold P16893

Download HSQC peak lists in one of the following formats:
CSV: Backbone or all simulated peaks
SPARKY: Backbone or all simulated peaks