BMRB Entry 6854

Name: 1H, 13C, and 15N Chemical Shift Assignments for the first SH3 domain of Nck2
Published: 2006-05-02

Chem Shift validation: AVS_full, LACS
BMRB Entry DOI: doi:10.13018/BMR6854

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Nicholas Rego and David Koes
3Dmol.js: molecular visualization with WebGL
Bioinformatics (2015) 31 (8): 1322-1324 doi:10.1093/bioinformatics/btu829

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Title:

1H, 13C, and 15N Chemical Shift Assignments for the first SH3 domain of Nck2

Deposition date:

2005-10-07

Original release date:

2006-05-02

Authors:

Park, Sunghyouk; Takeuchi, Koh; Wagner, Gerhard

Citation:

Citation: Park, Sunghyouk; Takeuchi, Koh; Wagner, Gerhard. "Solution structure of the first Src Homology 3 domain of Nck2" J. Biomol. NMR 34, 203-208 (2006).
PubMed: 16604428

Assembly members:

Assembly members:
Nck SH3 domain (1st), polymer, 59 residues, Formula weight is not available

Natural source:

Natural source: Common Name: Human Taxonomy ID: 9606 Superkingdom: Eukaryota Kingdom: Metazoa Genus/species: Homo sapiens

Experimental source:

Experimental source: Production method: recombinant technology

Entity Sequences (FASTA):

Entity Sequences (FASTA):
Nck SH3 domain (1st): MTEEVIVIAKWDYTAQQDQE LDIKKNERLWLLDDSKTWWR VRNAANRTGYVPSNYVERK

Data sets:

assigned_chemical_shifts
- chem_shift_list_1

Data type	Count
13C chemical shifts	182
15N chemical shifts	67
1H chemical shifts	408

Additional metadata:

Assembly
Samples and Experiments
Software
Spectrometers
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Assembly:

Entity Assembly ID	Entity Name	Entity ID
1	the first SH3 domain of Nck	1

Entities:

Entity 1, the first SH3 domain of Nck 59 residues - Formula weight is not available

1

MET

THR

GLU

VAL

ILE

VAL

ILE

ALA

LYS

2

TRP

ASP

TYR

THR

ALA

GLN

ASP

GLN

GLU

3

LEU

ASP

ILE

LYS

ASN

GLU

ARG

LEU

TRP

4

LEU

ASP

SER

LYS

THR

TRP

ARG

5

VAL

ARG

ASN

ALA

ASN

ARG

THR

GLY

TYR

6

VAL

PRO

SER

ASN

TYR

VAL

GLU

ARG

LYS

Samples:

sample_1: Nck SH3 domain (1st), [U-13C; U-15N], 0.6 mM; Sodium Phosphate 50 mM; EDTA 50 mM

conditions_1: pH: 6.5; temperature: 298 K

Experiments:

Name	Sample	Sample state	Sample conditions
1H15N HSQC	sample_1	not available	conditions_1
HNCACB	sample_1	not available	conditions_1
CBCACONH	sample_1	not available	conditions_1
13C edited NOESY	sample_1	not available	conditions_1
15N edited NOESY	sample_1	not available	conditions_1
HCCH TOCSY	sample_1	not available	conditions_1
D2O TOCSY	sample_1	not available	conditions_1
D2O NOESY	sample_1	not available	conditions_1
HCCONH	sample_1	not available	conditions_1
CCONH	sample_1	not available	conditions_1

Software:

No software information available

NMR spectrometers:

Varian Inova 500 MHz
Varian Inova 600 MHz

PDB	2B86 2JXB
GB	AAY14937 EPQ18600 EPY89463
REF	NP_001004722 XP_001516770 XP_005037783 XP_005276048 XP_005575245