BMRB Entry 6796

Name: NMR assignments of the dimeric S. aureus small multidrug-resistance pump in LPPG micelles
Published: 2006-03-10

Chem Shift validation: AVS_full, LACS
BMRB Entry DOI: doi:10.13018/BMR6796

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Nicholas Rego and David Koes
3Dmol.js: molecular visualization with WebGL
Bioinformatics (2015) 31 (8): 1322-1324 doi:10.1093/bioinformatics/btu829

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Title:

NMR assignments of the dimeric S. aureus small multidrug-resistance pump in LPPG micelles

Deposition date:

2005-08-29

Original release date:

2006-03-10

Authors:

Poget, Sebastien; Krueger-Koplin, Ray; Krueger-Koplin, Suzanne; Cahill, Sean; Shekar, S.; Girvin, Mark

Citation:

Citation: Poget, Sebastien; Krueger-Koplin, Suzanne; Krueger-Koplin, Ray; Cahill, Sean; Shekar, S.; Girvin, Mark. "NMR Assignment of the Dimeric S. aureus Small Multidrug-Resistance Pump in LPPG Micelles" J. Biomol. NMR 36, 10-10 (2006).
PubMed: 16456704

Assembly members:

Assembly members:
Staphylococcal multidrug-resistance pump (Smr), polymer, 107 residues, Formula weight is not available

Natural source:

Natural source: Common Name: S. aureus Taxonomy ID: 1280 Superkingdom: Bacteria Kingdom: not available Genus/species: Staphylococcus aureus

Experimental source:

Experimental source: Production method: recombinant technology

Entity Sequences (FASTA):

Entity Sequences (FASTA):
Staphylococcal multidrug-resistance pump (Smr): MPYIYLIIAISTEVIGSAFL KSSEGFSKFIPSLGTIISFG ICFYFLSKTMQHLPLNITYA TWAGLGLVLTTVVSIIIFKE QINLITIVSIVLIIVGVVSL NIFGTSH

Data sets:

assigned_chemical_shifts
- chem_shift_list_1

Data type	Count
13C chemical shifts	310
15N chemical shifts	104
1H chemical shifts	104

Additional metadata:

Assembly
Samples and Experiments
Software
Spectrometers
Hide all

Assembly:

Entity Assembly ID	Entity Name	Entity ID
1	Smr unit 1	1
2	Smr unit 2	1

Entities:

Entity 1, Smr unit 1 107 residues - Formula weight is not available

1

MET

PRO

TYR

ILE

TYR

LEU

ILE

ALA

ILE

2

SER

THR

GLU

VAL

ILE

GLY

SER

ALA

PHE

LEU

3

LYS

SER

GLU

GLY

PHE

SER

LYS

PHE

ILE

4

PRO

SER

LEU

GLY

THR

ILE

SER

PHE

GLY

5

ILE

CYS

PHE

TYR

PHE

LEU

SER

LYS

THR

MET

6

GLN

HIS

LEU

PRO

LEU

ASN

ILE

THR

TYR

ALA

7

THR

TRP

ALA

GLY

LEU

GLY

LEU

VAL

LEU

THR

8

THR

VAL

SER

ILE

PHE

LYS

GLU

9

GLN

ILE

ASN

LEU

ILE

THR

ILE

VAL

SER

ILE

10

VAL

LEU

ILE

VAL

GLY

VAL

SER

LEU

11

ASN

ILE

PHE

GLY

THR

SER

HIS

Samples:

sample_1: Staphylococcal multidrug-resistance pump (Smr), [U-2H; U-13C; U-15N], 1.5 mM; Lysopalmitouylphosphatidylglycerol 10%; Potassioum phosphate buffer 10 mM; Deuterium oxide 5%

conditions_1: pH*: 6.5; temperature: 320 K

Experiments:

Name	Sample	Sample state	Sample conditions
1H15N_TROSY	not available	isotropic	not available
1H15N_NOESY-TROSY	not available	isotropic	not available
1H15N_3D-TROSY-NOESY-TROSY	not available	isotropic	not available
TRHNCO	not available	isotropic	not available
TRHN(CA)CO	not available	isotropic	not available
TRHNCA	not available	isotropic	not available
TRHN(CO)CA	not available	isotropic	not available
TRHNCACB	not available	isotropic	not available
TRHN(CO)CACB	not available	isotropic	not available
4D-TRHNCACO	not available	isotropic	not available
4D-TRHNCOCA	not available	isotropic	not available

Software:

No software information available

NMR spectrometers:

Bruker Avance 800 MHz
Bruker Avance 700 MHz
Bruker Avance 600 MHz
Bruker Avance 500 MHz
Bruker Avance 900 MHz

BMRB	16783
DBJ	BAD01019 BAE92298 BAP94573
EMBL	CAA33598 CAA44471 CAA44472 CAA86016 CAC14916
GB	AAA26666 AAA26668 AAA60379 AAB02114 AAB07747
PRF	1907159A
REF	NP_647561 NP_863640 NP_878005 NP_940784 WP_001146389
SP	P14319 Q55339
AlphaFold	P14319 Q55339