BMRB Entry 6794

Name: L.mexicana ICP
Published: 2006-04-11

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PDB ID: 2c34
Entry in NMR Restraints Grid
Validation report in NRG-CING
Chem Shift validation: AVS_anomalous, AVS_full, LACS
BMRB Entry DOI: doi:10.13018/BMR6794
MolProbity Validation Chart

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Nicholas Rego and David Koes
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Bioinformatics (2015) 31 (8): 1322-1324 doi:10.1093/bioinformatics/btu829

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Title:

L.mexicana ICP

Deposition date:

2005-08-29

Original release date:

2006-04-11

Authors:

Smith, Brian; Westrop, Gareth; Mottram, Jeremy; Coombs, Graham

Citation:

Citation: Smith, Brian; Westrop, Gareth; Mottram, Jeremy; Coombs, Graham. "Chemical shift assignments of leishmania mexicana ICP, a novel cysteine peptidase inhibitor." J. Biomol. NMR 36, 7-7 (2006).
PubMed: 16596344

Assembly members:

Assembly members:
LM ICP residues 6 to 113, polymer, 108 residues, Formula weight is not available
LM ICP residues -2 to 5, polymer, 7 residues, Formula weight is not available

Natural source:

Natural source: Common Name: Leishmania mexicana Taxonomy ID: 5665 Superkingdom: Eukaryota Kingdom: not available Genus/species: Leishmania mexicana

Experimental source:

Experimental source: Production method: recombinant technology

Entity Sequences (FASTA):

Entity Sequences (FASTA):
LM ICP residues 6 to 113: SVKDNDKWVDTHVGKTTEIH LKGNPTTGYMWTRVGFVGKD VLSDEILEVVCKYTPTPSST PMVGVGGIYVVLVKPRKRGH HTLELVYTRPFEGIKPENER YTLHLNVK
LM ICP residues -2 to 5: GSHMIAPL

Data sets:

assigned_chemical_shifts
- chem_shift_list_1

Data type

Count

Additional metadata:

Assembly
Samples and Experiments
Software
Spectrometers
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Assembly:

Entity Assembly ID	Entity Name	Entity ID
1	LM_ICP2	1
2	LM_ICP1	2

Entities:

Entity 1, LM_ICP2 108 residues - Formula weight is not available

1

SER

VAL

LYS

ASP

ASN

ASP

LYS

TRP

VAL

ASP

2

THR

HIS

VAL

GLY

LYS

THR

GLU

ILE

HIS

3

LEU

LYS

GLY

ASN

PRO

THR

GLY

TYR

MET

4

TRP

THR

ARG

VAL

GLY

PHE

VAL

GLY

LYS

ASP

5

VAL

LEU

SER

ASP

GLU

ILE

LEU

GLU

VAL

6

CYS

LYS

TYR

THR

PRO

THR

PRO

SER

THR

7

PRO

MET

VAL

GLY

VAL

GLY

ILE

TYR

VAL

8

VAL

LEU

VAL

LYS

PRO

ARG

LYS

ARG

GLY

HIS

9

HIS

THR

LEU

GLU

LEU

VAL

TYR

THR

ARG

PRO

10

PHE

GLU

GLY

ILE

LYS

PRO

GLU

ASN

GLU

ARG

11

TYR

THR

LEU

HIS

LEU

ASN

VAL

LYS

Entity 2, LM_ICP1 7 residues - Formula weight is not available

1

GLY

SER

HIS

MET

ILE

ALA

PRO

LEU

Samples:

sample_1: LM_ICP2, [U-1H; U-15N; U-13C], 1.25 mM; H2O; LM_ICP1 mM; D2O 10%; Sodium phosphate 25 mM; Sodium chloride 50 mM

conditions_1: ionic strength: 75 mM; pH: 4.5; temperature: 294.8 K

Experiments:

Name	Sample	Sample state	Sample conditions
CBCACONH	not available	not available	not available
HNCACB	not available	not available	not available
HNCO	not available	not available	not available
HNCACO	not available	not available	not available
CCCONH	not available	not available	not available
HCCONH	not available	not available	not available
HCCH_TOCSY	not available	not available	not available
15N_NOESY_HSQC	not available	not available	not available
13C_NOESY_HSQC	not available	not available	not available
15N_HSQC	not available	not available	not available

Software:

ANSIG v3.3, . - assignment

ANALYSIS v1.0, . - assignment

CCPN formatConverter v1.0, . - conversion

AZARA v2.7, . - processing

NMR spectrometers:

Bruker/Oxford Avance 600 MHz
Bruker Avance 800 MHz

PDB	2C34
EMBL	CAD68975 CBZ27508
AlphaFold	Q868H1