BMRB Entry 6781

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PDB ID:
Entry in NMR Restraints Grid
Validation report in NRG-CING
Chem Shift validation: AVS_full, LACS
BMRB Entry DOI: doi:10.13018/BMR6781
MolProbity Validation Chart

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Title:
Resonance Assignments for the ADA2-like Swirm domain
Deposition date:
2005-08-17
Original release date:
2006-09-11
Authors:
Qian, Chengmin; Zeng, Lei; Zhang, Qiang; Zhou, Ming-Ming
Citation:

Citation: Qian, Chengmin; Zhang, Qiang; Li, S.; Zeng, Lei; Walsh, M.; Zhou, Ming-Ming. "Resonance Assignments for the ADA2-like Swirm domain"  Nat. Struct. Mol. Biol. 12, 1078-1085 (2006).
PubMed: 16299514

Assembly members:

Assembly members:
ADA2 swirm domain, polymer, 90 residues, Formula weight is not available

Natural source:

Natural source:   Common Name: mouse   Taxonomy ID: 10090   Superkingdom: Eukaryota   Kingdom: Metazoa   Genus/species: Mus musculus

Experimental source:

Experimental source:   Production method: recombinant technology

Entity Sequences (FASTA):

Entity Sequences (FASTA):
ADA2 swirm domain: GSNSGRRSAPPLNLTGLPGT EKLNEKEKELCQVVRLVPGA YLEYKSALLNECHKQGGLRL AQARALIKIDVNKTRKIYDF LIREGYITKA

Data sets:
Data typeCount
13C chemical shifts282
15N chemical shifts83
1H chemical shifts566

Additional metadata:

  • Assembly
  • Samples and Experiments
  • Software
  • Spectrometers
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Assembly:

Entity Assembly IDEntity NameEntity ID
1ada2 swirm domain polypeptide1

Entities:

Entity 1, ada2 swirm domain polypeptide 90 residues - Formula weight is not available

1   GLYSERASNSERGLYARGARGSERALAPRO
2   PROLEUASNLEUTHRGLYLEUPROGLYTHR
3   GLULYSLEUASNGLULYSGLULYSGLULEU
4   CYSGLNVALVALARGLEUVALPROGLYALA
5   TYRLEUGLUTYRLYSSERALALEULEUASN
6   GLUCYSHISLYSGLNGLYGLYLEUARGLEU
7   ALAGLNALAARGALALEUILELYSILEASP
8   VALASNLYSTHRARGLYSILETYRASPPHE
9   LEUILEARGGLUGLYTYRILETHRLYSALA

Samples:

sample_1: Ada2 swirm domain, [U-13C; U-15N], 0.5 mM; NaPi 50 mM; NaCl 100 mM; DTT 2 mM; EDTA 0.02 mM

conditions_1: pH: 6.5 .; temperature: 278 K

Experiments:

NameSampleSample stateSample conditions
HNCAsample_1not availableconditions_1
HN(CO)CAsample_1not availableconditions_1
HNCACBsample_1not availableconditions_1
HN(CO)CACBsample_1not availableconditions_1
HCCH-TOCSYsample_1not availableconditions_1
HCCH-COSYsample_1not availableconditions_1
3D 15N-NOESYsample_1not availableconditions_1
13C-NOESYsample_1not availableconditions_1

Software:

No software information available

NMR spectrometers:

  • Bruker DRX 600 MHz
  • Bruker DRX 500 MHz

Related Database Links:

PDB
DBJ BAC38925 BAE34272
GB AAH25448 AAH38821 AAH79084 AAI02759 ABL63422
REF NP_001012141 NP_001029416 NP_766150 XP_003512470 XP_004012486
SP Q3SZP8 Q6AYE3 Q8CHV6
TPG DAA19118
AlphaFold Q3SZP8 Q6AYE3 Q8CHV6 Q3SZP8 Q6AYE3 Q8CHV6

Download HSQC peak lists in one of the following formats:
CSV: Backbone or all simulated peaks
SPARKY: Backbone or all simulated peaks