BMRB Entry 6734

Name: The structure of human CD23 and its interactions with IgE and CD21
Published: 2005-10-18

Chem Shift validation: AVS_anomalous, AVS_full
BMRB Entry DOI: doi:10.13018/BMR6734

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Nicholas Rego and David Koes
3Dmol.js: molecular visualization with WebGL
Bioinformatics (2015) 31 (8): 1322-1324 doi:10.1093/bioinformatics/btu829

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Title:

The structure of human CD23 and its interactions with IgE and CD21

Deposition date:

2005-07-19

Original release date:

2005-10-18

Authors:

Hibbert, Richard; Teriete, Peter; McDonnell, James

Citation:

Citation: Hibbert, Richard; Teriete, Peter; Grundy, Gabrielle; Beavil, Rebecca; Reljic, Rajko; Holers, V.; Hannan, Jonathan; Sutton, Brian; Gould, Hannah; McDonnell, James. "The structure of human CD23 and its interactions with IgE and CD21" J. Exp. Med. 202, 751-760 (2005).
PubMed: 16172256

Assembly members:

Assembly members:
derCD23, polymer, 143 residues, Formula weight is not available

Natural source:

Natural source: Common Name: Human Taxonomy ID: 9606 Superkingdom: Eukaryota Kingdom: Metazoa Genus/species: Homo sapiens

Experimental source:

Experimental source: Production method: recombinant technology

Entity Sequences (FASTA):

Entity Sequences (FASTA):
derCD23: SGFVCNTCPEKWINFQRKCY YFGKGTKQWVHARYACDDME GQLVSIHSPEEQDFLTKHAS HTGSWIGLRNLDLKGEFIWV DGSHVDYSNWAPGEPTSRSQ GEDCVMMRGSGRWNDAFCDR KLGAWVCDRLATCTPPASEG SAE

Data sets:

assigned_chemical_shifts
- with_CD21

Data type	Count
15N chemical shifts	122
1H chemical shifts	126

Additional metadata:

Assembly
Samples and Experiments
Software
Spectrometers
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Assembly:

Entity Assembly ID	Entity Name	Entity ID
1	derCD23	1

Entities:

Entity 1, derCD23 143 residues - Formula weight is not available

1

SER

GLY

PHE

VAL

CYS

ASN

THR

CYS

PRO

GLU

2

LYS

TRP

ILE

ASN

PHE

GLN

ARG

LYS

CYS

TYR

3

TYR

PHE

GLY

LYS

GLY

THR

LYS

GLN

TRP

VAL

4

HIS

ALA

ARG

TYR

ALA

CYS

ASP

MET

GLU

5

GLY

GLN

LEU

VAL

SER

ILE

HIS

SER

PRO

GLU

6

GLU

GLN

ASP

PHE

LEU

THR

LYS

HIS

ALA

SER

7

HIS

THR

GLY

SER

TRP

ILE

GLY

LEU

ARG

ASN

8

LEU

ASP

LEU

LYS

GLY

GLU

PHE

ILE

TRP

VAL

9

ASP

GLY

SER

HIS

VAL

ASP

TYR

SER

ASN

TRP

10

ALA

PRO

GLY

GLU

PRO

THR

SER

ARG

SER

GLN

11

GLY

GLU

ASP

CYS

VAL

MET

ARG

GLY

SER

12

GLY

ARG

TRP

ASN

ASP

ALA

PHE

CYS

ASP

ARG

13

LYS

LEU

GLY

ALA

TRP

VAL

CYS

ASP

ARG

LEU

14

ALA

THR

CYS

THR

PRO

ALA

SER

GLU

GLY

15

SER

ALA

GLU

Samples:

sample_1: derCD23 mM

conditions_1: ionic strength: 0.150 M; pH: 6.8; temperature: 308 K

Experiments:

Name	Sample	Sample state	Sample conditions
1H15N_HSQC	sample_1	not available	conditions_1

Software:

No software information available

NMR spectrometers:

unknown unknown 0 MHz

Download HSQC peak lists in one of the following formats:
CSV: Backbone or all simulated peaks
SPARKY: Backbone or all simulated peaks