BMRB Entry 6727
Click here to enlarge.
PDB ID:
Entry in NMR Restraints Grid
Validation report in NRG-CING
Chem Shift validation: AVS_full, LACS
BMRB Entry DOI: doi:10.13018/BMR6727
MolProbity Validation Chart
NMR-STAR file interactive viewer.
NMR-STAR v3 text file.
XML gzip file.
RDF gzip file.
All files associated with the entry
Citation: Sue, Shih-Che; Hsaio, Hsin-Hao; Chung, Chih-Pin; Cheng, Ying-Hsien; Hsueh, Kuang-Lung; Chen, Chung Mong; Ho, Chia Hsing; Huang, Tai-huang. "Solution Structure of the Arabidopsis thaliana Telomeric Repeat-binding Protein
DNA Binding Domain: A New Fold with an Additional C-terminal Helix." J. Mol. Biol. 356, 72-85 (2005).
PubMed: 16337232
Assembly members:
telomeric repeat-binding domain of Arabidopsis thaliana, polymer, 105 residues, Formula weight is not available
Natural source: Common Name: Arabidopsis thaliana Taxonomy ID: 3702 Superkingdom: Eukaryota Kingdom: Viridiplantae Genus/species: Arabidopsis thaliana
Experimental source: Production method: recombinant technology
Entity Sequences (FASTA):
telomeric repeat-binding domain of Arabidopsis thaliana: GSHMLEDPQRRIRRPFSVAE
VEALVQAVEKLGTGRWRDVK
LCAFEDADHRTYVDLKDKWK
TLVHTAKISPQQRRGEPVPQ
ELLNRVLNAHGYWTQQQMQQ
LQQNV
- assigned_chemical_shifts
| Data type | Count |
| 13C chemical shifts | 399 |
| 15N chemical shifts | 96 |
| 1H chemical shifts | 619 |
Additional metadata:
Assembly:
| Entity Assembly ID | Entity Name | Entity ID |
|---|---|---|
| 1 | telomeric repeat-binding domain of Arabidopsis thaliana | 1 |
Entities:
Entity 1, telomeric repeat-binding domain of Arabidopsis thaliana 105 residues - Formula weight is not available
| 1 | GLY | SER | HIS | MET | LEU | GLU | ASP | PRO | GLN | ARG | ||||
| 2 | ARG | ILE | ARG | ARG | PRO | PHE | SER | VAL | ALA | GLU | ||||
| 3 | VAL | GLU | ALA | LEU | VAL | GLN | ALA | VAL | GLU | LYS | ||||
| 4 | LEU | GLY | THR | GLY | ARG | TRP | ARG | ASP | VAL | LYS | ||||
| 5 | LEU | CYS | ALA | PHE | GLU | ASP | ALA | ASP | HIS | ARG | ||||
| 6 | THR | TYR | VAL | ASP | LEU | LYS | ASP | LYS | TRP | LYS | ||||
| 7 | THR | LEU | VAL | HIS | THR | ALA | LYS | ILE | SER | PRO | ||||
| 8 | GLN | GLN | ARG | ARG | GLY | GLU | PRO | VAL | PRO | GLN | ||||
| 9 | GLU | LEU | LEU | ASN | ARG | VAL | LEU | ASN | ALA | HIS | ||||
| 10 | GLY | TYR | TRP | THR | GLN | GLN | GLN | MET | GLN | GLN | ||||
| 11 | LEU | GLN | GLN | ASN | VAL |
Samples:
sample_1: AtTRP1d, [U-13C; U-15N], 1 mM
conditions_1: pH*: 7.4; temperature: 298 K
Experiments:
| Name | Sample | Sample state | Sample conditions |
|---|---|---|---|
| 1H-15N HSQC | not available | not available | not available |
| HNCA | not available | not available | not available |
| HN(CO)CA | not available | not available | not available |
| HNCO | not available | not available | not available |
| CBCANH | not available | not available | not available |
| CBCA(CO)NH | not available | not available | not available |
| HCCH-TOSCY | not available | not available | not available |
| HCCH-COSY | not available | not available | not available |
| HBHA(CO)NH | not available | not available | not available |
| 15N NOESY-HSQC | not available | not available | not available |
| 13C NOESY-HSQC | not available | not available | not available |
Software:
xwinnmr v3.5 -
NMR spectrometers:
- Bruker AVANCE 600 MHz
Related Database Links:
| PDB | |
| DBJ | BAA97479 BAH19498 BAH56945 |
| EMBL | CAB50690 |
| GB | AAM91585 AAN15436 AAS10014 AED97184 AED97185 |
| REF | NP_001078770 NP_001078771 NP_200751 NP_851221 XP_002864634 |
| SP | Q8L7L8 |
| AlphaFold | Q8L7L8 |
Download HSQC peak lists in one of the following formats:
CSV: Backbone
or all simulated peaks
SPARKY: Backbone
or all simulated peaks