BMRB Entry 6653

Chem Shift validation: AVS_full, LACS
BMRB Entry DOI: doi:10.13018/BMR6653

NMR-STAR file interactive viewer.
NMR-STAR v3 text file.
XML gzip file.
RDF gzip file.
All files associated with the entry

Nicholas Rego and David Koes
3Dmol.js: molecular visualization with WebGL
Bioinformatics (2015) 31 (8): 1322-1324 doi:10.1093/bioinformatics/btu829

Select model:

I am color blind

Download raw data. Direct link to this display. Help

Title:

Solution Structure of a Zap1 Zinc-Responsive Domain Provides Insights into Metalloregulatory Transcriptional Repression in Saccharomyces cerevisiae

Deposition date:

2005-06-03

Original release date:

2006-04-24

Authors:

Wang, Zhonghua; Feng, Linda; Venkataraman, Krishna; Matskevich, Viktor; Parasuram, Priya; Laity, John

Citation:

Citation: Wang, Zhonghua; Feng, Linda; Matskevich, Viktor; Venkataraman, Krishna; Parasuram, Priya; Laity, John. "Solution Structure of a Zap1 Zinc-responsive Domain Provides Insights into Metalloregulatory Transcriptional Repression in Saccharomyces cerevisiae." J. Mol. Biol. 357, 1167-1183 (2006).
PubMed: 16483601

Assembly members:

Assembly members:
zzf1L, polymer, 38 residues, Formula weight is not available
ZN, non-polymer, 65.409 Da.

Natural source:

Natural source: Common Name: yeast Taxonomy ID: 4932 Superkingdom: Eukaryota Kingdom: Fungi Genus/species: Saccharomyces cerevisiae

Experimental source:

Experimental source: Production method: recombinant technology Vector: p21a-zzf1L

Entity Sequences (FASTA):

Entity Sequences (FASTA):
zzf1L: DLKCKWKECPESCSSLFDLQ RHLLKDHVSQDFKHPMEP

Data sets:

assigned_chemical_shifts
- chem_shift_list_1

Data type	Count
13C chemical shifts	89
1H chemical shifts	26
15N chemical shifts	26

Additional metadata:

Assembly
Samples and Experiments
Software
Spectrometers
Hide all

Assembly:

Entity Assembly ID	Entity Name	Entity ID
1	38 amino acid polypeptide	1
2	Zinc	2

Entities:

Entity 1, 38 amino acid polypeptide 38 residues - Formula weight is not available

1

ASP

LEU

LYS

CYS

LYS

TRP

LYS

GLU

CYS

PRO

2

GLU

SER

CYS

SER

LEU

PHE

ASP

LEU

GLN

3

ARG

HIS

LEU

LYS

ASP

HIS

VAL

SER

GLN

4

ASP

PHE

LYS

HIS

PRO

MET

GLU

PRO

Entity 2, Zinc - Zn - 65.409 Da.

1

ZN

Samples:

sample_1: zzf1L, [U-13C; U-15N], 0.8 mM; ZN 0.9 mM; MES 20 mM; Tri(2-carboxyethyl)-phosphine hydrochloride 0.5 mM; DSS 0.2 mM; NaN2 1 mM

conditions_1: pH: 6.9; temperature: 293 K

Experiments:

Name	Sample	Sample state	Sample conditions
2D 1H-15N_HSQC	sample_1	not available	conditions_1
3D HNCACB	sample_1	not available	conditions_1
3D CBCA(CO)NH	sample_1	not available	conditions_1
3D HNCO	sample_1	not available	conditions_1

Software:

NMRView v5.0.4 - Data analysis

NMRPipe v97.027.12.56 - Raw spectral data processing

NMR spectrometers:

Varian Inova 600 MHz

Download HSQC peak lists in one of the following formats:
CSV: Backbone or all simulated peaks
SPARKY: Backbone or all simulated peaks