BMRB Entry 6642

Chem Shift validation: AVS_full
BMRB Entry DOI: doi:10.13018/BMR6642

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Nicholas Rego and David Koes
3Dmol.js: molecular visualization with WebGL
Bioinformatics (2015) 31 (8): 1322-1324 doi:10.1093/bioinformatics/btu829

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Title:

Backbone 1H, 13C and 15N Chemical Shift Assignments for apo chicken liver bile acid binding protein

Deposition date:

2005-05-21

Original release date:

2006-11-06

Authors:

Catalano, Maddalena; Ragona, Laura; Molinari, Henriette; Zetta, Lucia

Citation:

Citation: Ragona, Laura; Catalano, Maddalena; Luppi, Marianna; Cicero, Daniel; Eliseo, Tommaso; Foote, Jefferson; Fogolari, Federico; Zetta, Lucia; Molinari, Henriette. "NMR dynamic studies suggest that allosteric activation regulates ligand binding in chicken liver bile acid binding protein" J. Biol. Chem. 281, 9697-9709 (2006).
PubMed: 16439356

Assembly members:

Assembly members:
chicken liver BABP, polymer, 125 residues, Formula weight is not available

Natural source:

Natural source: Common Name: chicken Taxonomy ID: 9031 Superkingdom: Eukaryota Kingdom: Metazoa Genus/species: Gallus gallus

Experimental source:

Experimental source: Production method: recombinant technology

Entity Sequences (FASTA):

Entity Sequences (FASTA):
chicken liver BABP: AFSGTWQVYAQENYEEFLKA LALPEDLIKMARDIKPIVEI QQKGDDFVVTSKTPRQTVTN SFTLGKEADITTMDGKKLKC TVHLANGKLVTKSEKFSHEQ EVKGNEMVETITFGGVTLIR RSKRV

Data sets:

assigned_chemical_shifts
- chem_shift_list_1

Data type	Count
13C chemical shifts	206
15N chemical shifts	112
1H chemical shifts	234

Additional metadata:

Assembly
Samples and Experiments
Software
Spectrometers
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Assembly:

Entity Assembly ID	Entity Name	Entity ID
1	chicken liver BABP	1

Entities:

Entity 1, chicken liver BABP 125 residues - Formula weight is not available

1

ALA

PHE

SER

GLY

THR

TRP

GLN

VAL

TYR

ALA

2

GLN

GLU

ASN

TYR

GLU

PHE

LEU

LYS

ALA

3

LEU

ALA

LEU

PRO

GLU

ASP

LEU

ILE

LYS

MET

4

ALA

ARG

ASP

ILE

LYS

PRO

ILE

VAL

GLU

ILE

5

GLN

LYS

GLY

ASP

PHE

VAL

THR

6

SER

LYS

THR

PRO

ARG

GLN

THR

VAL

THR

ASN

7

SER

PHE

THR

LEU

GLY

LYS

GLU

ALA

ASP

ILE

8

THR

MET

ASP

GLY

LYS

LEU

LYS

CYS

9

THR

VAL

HIS

LEU

ALA

ASN

GLY

LYS

LEU

VAL

10

THR

LYS

SER

GLU

LYS

PHE

SER

HIS

GLU

GLN

11

GLU

VAL

LYS

GLY

ASN

GLU

MET

VAL

GLU

THR

12

ILE

THR

PHE

GLY

VAL

THR

LEU

ILE

ARG

13

ARG

SER

LYS

ARG

VAL

Samples:

sample_1: chicken liver BABP, [U-93% 13C; U-93% 15N], 1 mM; phosphate buffer 20 mM

conditions_1: ionic strength: 0.020 M; pH: 7.0; temperature: 298 K

Experiments:

Name	Sample	Sample state	Sample conditions

Software:

No software information available

NMR spectrometers:

Bruker AVANCE 700 MHz

BMRB	15084 15854 16309 16310 16458 17767 5512
PDB	1MVG 1TVQ 1TW4 1ZRY 2JN3 2K62 2LFO
GB	AAK58094 ADE59142 ADE59143 ADE59144 ADE59145
PRF	2106165A
REF	NP_989965
SP	P80226
AlphaFold	P80226