BMRB Entry 6638
Chem Shift validation: AVS_anomalous, AVS_full, LACS
BMRB Entry DOI: doi:10.13018/BMR6638
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NMR-STAR v3 text file.
XML gzip file.
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Citation: Park, Sung-Jean; Seo, Min-Duk; Lee, S.; Ikeda, M.; Longnecker, R.; Lee, Bong-Jin. "Expression and characterization of N-terminal domain of Epstein-Barr Virus
latent membrane protein 2A in Escherichia coli" Protein Expr. Purf. 41, 9-17 (2005).
PubMed: 15802216
Assembly members:
lmp2a NTD, polymer, 122 residues, Formula weight is not available
Natural source: Common Name: Epstein Barr Virus Taxonomy ID: 10298 Superkingdom: Viruses Kingdom: Not applicable Genus/species: Simplexvirus Human herpesvirus 1
Experimental source: Production method: recombinant technology
Entity Sequences (FASTA):
lmp2a NTD: GRAMGSLEMVPMGAGPPSPG
GDPDGYDGGNNSQYPSASGS
SGNTPTPPNDEERESNEEPP
PPYEDPYWGNGDRHSDYQPL
GTQDQSLYLGLQHDGNDGLP
PPPYSPRDDSSQHIYEEAGR
GS
- assigned_chemical_shifts
| Data type | Count |
| 13C chemical shifts | 385 |
| 15N chemical shifts | 101 |
| 1H chemical shifts | 437 |
Additional metadata:
Assembly:
| Entity Assembly ID | Entity Name | Entity ID |
|---|---|---|
| 1 | lmp2a NTD | 1 |
Entities:
Entity 1, lmp2a NTD 122 residues - Formula weight is not available
| 1 | GLY | ARG | ALA | MET | GLY | SER | LEU | GLU | MET | VAL | ||||
| 2 | PRO | MET | GLY | ALA | GLY | PRO | PRO | SER | PRO | GLY | ||||
| 3 | GLY | ASP | PRO | ASP | GLY | TYR | ASP | GLY | GLY | ASN | ||||
| 4 | ASN | SER | GLN | TYR | PRO | SER | ALA | SER | GLY | SER | ||||
| 5 | SER | GLY | ASN | THR | PRO | THR | PRO | PRO | ASN | ASP | ||||
| 6 | GLU | GLU | ARG | GLU | SER | ASN | GLU | GLU | PRO | PRO | ||||
| 7 | PRO | PRO | TYR | GLU | ASP | PRO | TYR | TRP | GLY | ASN | ||||
| 8 | GLY | ASP | ARG | HIS | SER | ASP | TYR | GLN | PRO | LEU | ||||
| 9 | GLY | THR | GLN | ASP | GLN | SER | LEU | TYR | LEU | GLY | ||||
| 10 | LEU | GLN | HIS | ASP | GLY | ASN | ASP | GLY | LEU | PRO | ||||
| 11 | PRO | PRO | PRO | TYR | SER | PRO | ARG | ASP | ASP | SER | ||||
| 12 | SER | GLN | HIS | ILE | TYR | GLU | GLU | ALA | GLY | ARG | ||||
| 13 | GLY | SER |
Samples:
sample_1: lmp2a NTD, [U-13C; U-15N], 0.5 mM; Na phosphate 50 mM; NaCl 100 mM; EDTA 1 mM
conditions_1: ionic strength: 0.1 M; pH: 6.0; temperature: 288 K
Experiments:
| Name | Sample | Sample state | Sample conditions |
|---|---|---|---|
| HNCA | sample_1 | not available | conditions_1 |
| HNCOCA | not available | not available | not available |
| HNCACB | not available | not available | not available |
| CBCACONH | not available | not available | not available |
| HNCO | not available | not available | not available |
| HNCACO | not available | not available | not available |
| HBHACONH | not available | not available | not available |
| HCCH-TOCSY | not available | not available | not available |
| 15N-TOCSY | not available | not available | not available |
Software:
NMRPipe -
NMR spectrometers:
- Bruker Avance DMX 600 MHz
Related Database Links:
| DBJ | BAF80317 BAF80319 BAF80320 BAF80321 |
| EMBL | CAA57360 CAA57363 CAA57365 CAA57366 CAA57369 |
| GB | AAA45887 AAS64577 ABB89217 ADK56647 ADK56649 |
| REF | YP_001129436 YP_401631 |
| SP | P0C729 P13285 Q1HVJ2 |
| AlphaFold | P0C729 P13285 Q1HVJ2 |
Download HSQC peak lists in one of the following formats:
CSV: Backbone
or all simulated peaks
SPARKY: Backbone
or all simulated peaks