BMRB Entry 6610

Chem Shift validation: AVS_full, LACS
BMRB Entry DOI: doi:10.13018/BMR6610

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Title:
apg8a.title
Deposition date:
2005-04-26
Original release date:
2005-10-26
Authors:
Chae, Young Kee; Lee, Kyunghee; Markley, John
Citation:

Citation: Chae, Young Kee; Lee, Kyunghee; Markley, John. "1H, 15N and 13C Resonance Assignments of a Protein Involved in the Autophagy Process, At4g21980.1 from Arabidopsis thaliana"  J. Biomol. NMR 32, 337-337 (2005).
PubMed: 16211491

Assembly members:

Assembly members:
apg8a, polymer, 117 residues, Formula weight is not available

Natural source:

Natural source:   Common Name: arabidopsis thaliana   Taxonomy ID: 3702   Superkingdom: Eukaryota   Kingdom: Viridiplantae   Genus/species: arabidopsis thaliana

Experimental source:

Experimental source:   Production method: recombinant technology

Entity Sequences (FASTA):

Entity Sequences (FASTA):
apg8a: MAKSSFKISNPLEARMSESS RIREKYPDRIPVIVEKAGQS DVPDIDKKKYLVPADLTVGQ FVYVVRKRIKLGAEKAIFVF VKNTLPPTAALMSAIYEEHK DEDGFLYMTYSGENTFG

Data sets:
Data typeCount
13C chemical shifts282
15N chemical shifts95
1H chemical shifts188

Additional metadata:

  • Assembly
  • Samples and Experiments
  • Software
  • Spectrometers
  • Hide all

Assembly:

Entity Assembly IDEntity NameEntity ID
1apg8a1

Entities:

Entity 1, apg8a 117 residues - Formula weight is not available

1   METALALYSSERSERPHELYSILESERASN
2   PROLEUGLUALAARGMETSERGLUSERSER
3   ARGILEARGGLULYSTYRPROASPARGILE
4   PROVALILEVALGLULYSALAGLYGLNSER
5   ASPVALPROASPILEASPLYSLYSLYSTYR
6   LEUVALPROALAASPLEUTHRVALGLYGLN
7   PHEVALTYRVALVALARGLYSARGILELYS
8   LEUGLYALAGLULYSALAILEPHEVALPHE
9   VALLYSASNTHRLEUPROPROTHRALAALA
10   LEUMETSERALAILETYRGLUGLUHISLYS
11   ASPGLUASPGLYPHELEUTYRMETTHRTYR
12   SERGLYGLUASNTHRPHEGLY

Samples:

apg8a.sample: apg8a, [U-15N; U-13C], 1.0 mM

sample_condition_label: pH: 7.0; temperature: 298 K

Experiments:

NameSampleSample stateSample conditions
n15-hsqcnot availablenot availablenot available
hncanot availablenot availablenot available
hncocanot availablenot availablenot available
cbcaconhnot availablenot availablenot available
n15-tocsynot availablenot availablenot available
hnconot availablenot availablenot available

Software:

No software information available

NMR spectrometers:

  • Bruker DMX 750 MHz
  • Varian Inova 800 MHz

Related Database Links:

DBJ BAB88387
EMBL CAA18101 CAB79153
GB AAM62580 AAM70188 AAN72035 AAP21330 AEE84537
REF NP_001078424 NP_567642 XP_002869850 XP_006284768 XP_006413700
SP Q8LEM4
AlphaFold Q8LEM4

Download HSQC peak lists in one of the following formats:
CSV: Backbone or all simulated peaks
SPARKY: Backbone or all simulated peaks