BMRB Entry 6607
Chem Shift validation: AVS_full, LACS
BMRB Entry DOI: doi:10.13018/BMR6607
NMR-STAR file interactive viewer.
NMR-STAR v3 text file.
XML gzip file.
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Citation: Kusunoki, Hideki; Hasegawa, Tsukasa; Komatsu, Chieko; Takeuchi, Takashi; Kohno, Toshiyuki. "1H, 13C and 15N Resonance Assignments of the AT-Rich Interaction Domain (ARID)
of Jumonji" J. Biomol. NMR 33, 74-74 (2005).
PubMed: 16222563
Assembly members:
JMJ ARID, polymer, 116 residues, 13547 Da.
Natural source: Common Name: Mus musculus Taxonomy ID: 10090 Superkingdom: Eukaryota Kingdom: Metazoa Genus/species: Mus musculus
Experimental source: Production method: recombinant technology
Entity Sequences (FASTA):
JMJ ARID: LGRRWGPNVQRLACIKKHLR
SQGITMDELPLIGGCELDLA
CFFRLINEMGGMQQVTDLKK
WNKLADMLRIPKTAQDRLAK
LQEAYCQYLLSYDSLSPEEH
RRLEKEVLMEKEILEK
- assigned_chemical_shifts
| Data type | Count |
| 13C chemical shifts | 495 |
| 15N chemical shifts | 120 |
| 1H chemical shifts | 800 |
Additional metadata:
Assembly:
| Entity Assembly ID | Entity Name | Entity ID |
|---|---|---|
| 1 | Jumonji | 1 |
Entities:
Entity 1, Jumonji 116 residues - 13547 Da.
| 1 | LEU | GLY | ARG | ARG | TRP | GLY | PRO | ASN | VAL | GLN | ||||
| 2 | ARG | LEU | ALA | CYS | ILE | LYS | LYS | HIS | LEU | ARG | ||||
| 3 | SER | GLN | GLY | ILE | THR | MET | ASP | GLU | LEU | PRO | ||||
| 4 | LEU | ILE | GLY | GLY | CYS | GLU | LEU | ASP | LEU | ALA | ||||
| 5 | CYS | PHE | PHE | ARG | LEU | ILE | ASN | GLU | MET | GLY | ||||
| 6 | GLY | MET | GLN | GLN | VAL | THR | ASP | LEU | LYS | LYS | ||||
| 7 | TRP | ASN | LYS | LEU | ALA | ASP | MET | LEU | ARG | ILE | ||||
| 8 | PRO | LYS | THR | ALA | GLN | ASP | ARG | LEU | ALA | LYS | ||||
| 9 | LEU | GLN | GLU | ALA | TYR | CYS | GLN | TYR | LEU | LEU | ||||
| 10 | SER | TYR | ASP | SER | LEU | SER | PRO | GLU | GLU | HIS | ||||
| 11 | ARG | ARG | LEU | GLU | LYS | GLU | VAL | LEU | MET | GLU | ||||
| 12 | LYS | GLU | ILE | LEU | GLU | LYS |
Samples:
Sample: JMJ ARID, [U-13C; U-15N], 1 mM; Sodium Phosphate 22.5 mM; DTT 1.8 mM; NaCl 90 mM
sample_condition: pH: 6.4; temperature: 288 K
Experiments:
| Name | Sample | Sample state | Sample conditions |
|---|---|---|---|
| 1H15N HSQC | not available | not available | not available |
| 1H13C HSQC | not available | not available | not available |
| HNCO | not available | not available | not available |
| HN(CA)CO | not available | not available | not available |
| HNCA | not available | not available | not available |
| HN(CO)CA | not available | not available | not available |
| CBCA(CO)NH | not available | not available | not available |
| HNCACB | not available | not available | not available |
| (H)CC(CO)NH | not available | not available | not available |
| H(CCCO)NH | not available | not available | not available |
| HCCH-TOCSY | not available | not available | not available |
| (HB)CB(CGCD)HD | not available | not available | not available |
| (HB)CB(CGCDCE)HE | not available | not available | not available |
| TOCSY | not available | not available | not available |
| NOESY | not available | not available | not available |
| HNHA | not available | not available | not available |
| HNHB | not available | not available | not available |
| 15N-edited NOESY-HSQC | not available | not available | not available |
| 13C-edited NOESY-HSQC | not available | not available | not available |
Software:
NMRPipe -
PIPP -
NMR spectrometers:
- Bruker AVANCE 500 MHz
Related Database Links:
| PDB | |
| DBJ | BAA06736 BAC32264 BAE27780 BAE37641 BAF85550 |
| GB | AAH03374 AAH46246 AAH52444 AAH60695 AAI15759 |
| REF | NP_001191972 NP_001191973 NP_001253969 NP_004964 NP_068678 |
| SP | Q62315 Q92833 |
| TPG | DAA16223 |
| AlphaFold | Q62315 Q92833 |
Download HSQC peak lists in one of the following formats:
CSV: Backbone
or all simulated peaks
SPARKY: Backbone
or all simulated peaks