BMRB Entry 6528

Name: 1H, 15N and 13C Assignments for the R2 Domain of Choline Binding Protein A (CbpA)
Published: 2005-08-22

Chem Shift validation: AVS_anomalous, AVS_full, LACS
BMRB Entry DOI: doi:10.13018/BMR6528

NMR-STAR file interactive viewer.
NMR-STAR v3 text file.
XML gzip file.
RDF gzip file.
All files associated with the entry

Nicholas Rego and David Koes
3Dmol.js: molecular visualization with WebGL
Bioinformatics (2015) 31 (8): 1322-1324 doi:10.1093/bioinformatics/btu829

Select model:

I am color blind

Download raw data. Direct link to this display. Help

Title:

1H, 15N and 13C Assignments for the R2 Domain of Choline Binding Protein A (CbpA)

Deposition date:

2005-03-02

Original release date:

2005-08-22

Authors:

Luo, Rensheng; Kriwacki, Richard; Mann, Beth; Tuomanen, Elaine

Citation:

Citation: Luo, Rensheng; Mann, Beth; Tuomanen, Elaine; Kriwacki, Richard. "NMR assignment of the R2 domain of pneumococcal choline binding protein A (CbpA)" J. Biomol. NMR 31, 93-93 (2005).

Assembly members:

Assembly members:
Choline binding protein A R2 domain, polymer, 121 residues, 13580 Da.

Natural source:

Natural source: Common Name: not applicable Taxonomy ID: not available Superkingdom: Other Kingdom: Not applicable Genus/species: not applicable not applicable

Experimental source:

Experimental source: Production method: recombinant technology

Entity Sequences (FASTA):

Entity Sequences (FASTA):
Choline binding protein A R2 domain: GSHMPEKKVAEAEKKVEEAK KKAEDQKEEDRRNYPTNTYK TLELEIAESDVEVKKAELEL VKEEAKEPRNEEKVKQAKAE VESKKAEATRLEKIKTDRKK AEEEAKRKAAEEDKVKEKPA E

Data sets:

assigned_chemical_shifts
- chem_shift_list_1

Data type	Count
13C chemical shifts	563
15N chemical shifts	119
1H chemical shifts	862

Additional metadata:

Assembly
Samples and Experiments
Software
Spectrometers
Hide all

Assembly:

Entity Assembly ID	Entity Name	Entity ID
1	Choline_binding_protein_A_R2_domain	1

Entities:

Entity 1, Choline_binding_protein_A_R2_domain 121 residues - 13580 Da.

1

GLY

SER

HIS

MET

PRO

GLU

LYS

VAL

ALA

2

GLU

ALA

GLU

LYS

VAL

GLU

ALA

LYS

3

LYS

ALA

GLU

ASP

GLN

LYS

GLU

ASP

4

ARG

ASN

TYR

PRO

THR

ASN

THR

TYR

LYS

5

THR

LEU

GLU

LEU

GLU

ILE

ALA

GLU

SER

ASP

6

VAL

GLU

VAL

LYS

ALA

GLU

LEU

GLU

LEU

7

VAL

LYS

GLU

ALA

LYS

GLU

PRO

ARG

ASN

8

GLU

LYS

VAL

LYS

GLN

ALA

LYS

ALA

GLU

9

VAL

GLU

SER

LYS

ALA

GLU

ALA

THR

ARG

10

LEU

GLU

LYS

ILE

LYS

THR

ASP

ARG

LYS

11

ALA

GLU

ALA

LYS

ARG

LYS

ALA

12

GLU

ASP

LYS

VAL

LYS

GLU

LYS

PRO

ALA

13

GLU

Samples:

sample_1: Choline_binding_protein_A_R2_domain, [U-2H; U-13C; U-15N], 1.8 mM; sodium phosphate buffer 10 mM; sodium azide 0.02%; D2O 10%

conditions_1: pH: 5; temperature: 298 K

Experiments:

Name	Sample	Sample state	Sample conditions
1H15N_HSQC	sample_1	isotropic	conditions_1
3D CT-HNCA, CT-HN(CO)CA	not available	not available	not available
3D TROSY-HNCO, TROSY-HN(CA)CO	not available	not available	not available
3D TROSY-HNCACB, TROSY-HN(CO)CACB	not available	not available	not available
4D 15N/15N-NOESY,	not available	not available	not available
4D TROSY-HNCOCA, TROSY-HNCACO	not available	not available	not available
3D HCCH-TOCSY, HCCH-COSY	not available	not available	not available
C(CO)NH-TOCSY,HBHA(CBCACO)NH	not available	not available	not available
3D 13C and 15N-NOESY-HSQC,	not available	not available	not available
4D 13C/13C and 13C/15N NOESY	not available	not available	not available

Software:

FELIX v2000, Accelerys - analysis NMR data

NMRPipe - process NMR data

NMR spectrometers:

bruker Avance 800MHz MHz
varian INOVA 600MHz MHz
Varian INOVA 900MHz MHz

PDB	1W9R
GB	AAK72975 AAK72978 EGI81953 EHD40149 EHD46487
REF	WP_033707817