BMRB Entry 6473

Chem Shift validation: AVS_full, LACS
BMRB Entry DOI: doi:10.13018/BMR6473

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Nicholas Rego and David Koes
3Dmol.js: molecular visualization with WebGL
Bioinformatics (2015) 31 (8): 1322-1324 doi:10.1093/bioinformatics/btu829

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Title:

Structural and dynamic characteristics of the acid-unfolded state of hUBF HMG Box 1 provide clues for the early events in protien folding

Deposition date:

2005-01-30

Original release date:

2005-02-17

Authors:

Zhang, Xuecheng; Xu, Yingqi; Zhang, Jiahai; Wu, Jihui; Shi, Yunyu

Citation:

Citation: Zhang, Xuecheng; Zhang, Jiahai; Li, X.; Xu, J.; Huang, H.; Chen, Q.; Wu, Jihui; Shi, Yunyu. "Compact molten globule-like state of hUBF HMG Box1 at extremely low pH" Biochim Biophys Acta 1748, 66-73 (2005).
PubMed: 15752694

Assembly members:

Assembly members:
human upstream binding factor high mobility group box 1, polymer, 99 residues, Formula weight is not available

Natural source:

Natural source: Common Name: Human Taxonomy ID: 9606 Superkingdom: Eukaryota Kingdom: Metazoa Genus/species: Homo sapiens

Experimental source:

Experimental source: Production method: recombinant technology

Entity Sequences (FASTA):

Entity Sequences (FASTA):
human upstream binding factor high mobility group box 1: MKKLKKHPDFPKKPLTPYFR FFMEKRAKYAKLHPEMSNLD LTKILSKKYKELPEKKKMKY IQDFQREKQEFERNLARFRE DHPDLIQNAKKLEHHHHHH

Data sets:

assigned_chemical_shifts
- assigned_chemical_shifts_1

Data type	Count
1H chemical shifts	190
13C chemical shifts	297
15N chemical shifts	91

Additional metadata:

Assembly
Samples and Experiments
Software
Spectrometers
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Assembly:

Entity Assembly ID	Entity Name	Entity ID
1	hUBF HMG Box 1	1

Entities:

Entity 1, hUBF HMG Box 1 99 residues - Formula weight is not available

1

MET

LYS

LEU

LYS

HIS

PRO

ASP

PHE

2

PRO

LYS

PRO

LEU

THR

PRO

TYR

PHE

ARG

3

PHE

MET

GLU

LYS

ARG

ALA

LYS

TYR

ALA

4

LYS

LEU

HIS

PRO

GLU

MET

SER

ASN

LEU

ASP

5

LEU

THR

LYS

ILE

LEU

SER

LYS

TYR

LYS

6

GLU

LEU

PRO

GLU

LYS

MET

LYS

TYR

7

ILE

GLN

ASP

PHE

GLN

ARG

GLU

LYS

GLN

GLU

8

PHE

GLU

ARG

ASN

LEU

ALA

ARG

PHE

ARG

GLU

9

ASP

HIS

PRO

ASP

LEU

ILE

GLN

ASN

ALA

LYS

10

LYS

LEU

GLU

HIS

Samples:

sample_1: human upstream binding factor high mobility group box 1, [U-13C; U-15N], 1 mM

sample_conditions_1: pH: 2.1; temperature: 303 K

Experiments:

Name	Sample	Sample state	Sample conditions

Software:

No software information available

NMR spectrometers:

Bruker DMX 600 MHz

PDB	1K99
EMBL	CAC34632
GB	AAH31423 EAW51620 KFO25262
REF	XP_003362590 XP_008111485 XP_009067615 XP_009504711 XP_009968165