BMRB Entry 6378
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PDB ID:
Entry in NMR Restraints Grid
Validation report in NRG-CING
Chem Shift validation: AVS_full, LACS
BMRB Entry DOI: doi:10.13018/BMR6378
MolProbity Validation Chart
NMR-STAR file interactive viewer.
NMR-STAR v3 text file.
XML gzip file.
RDF gzip file.
All files associated with the entry
Citation: Lysek, Dominikus; Schorn, Christian; Nivon, Lucas; Esteve-Moya, Vicent; Christen, Barbara; Calzolai, Luigi; von Schroetter, Christine; Fiorito, Francesco; Herrmann, Torsten; Guntert, Peter; Wuthrich, Kurt. "Prion protein NMR structures of cats, dogs, pigs, and sheep" Proc. Natl. Acad. Sci. U.S.A. 102, 640-645 (2005).
PubMed: 15647367
Assembly members:
canine prion protein, polymer, 113 residues, Formula weight is not available
Natural source: Common Name: dog Taxonomy ID: 9615 Superkingdom: Eukaryota Kingdom: Metazoa Genus/species: Canis familiaris
Experimental source: Production method: recombinant technology
Entity Sequences (FASTA):
canine prion protein: GSVVGGLGGYMLGSAMSRPL
IHFGNDYEDRYYRENMYRYP
DQVYYRPVDQYSNQNNFVRD
CVNITVKQHTVTTTTKGENF
TETDMKIMERVVEQMCVTQY
QKESEAYYQRGAS
- assigned_chemical_shifts
| Data type | Count |
| 13C chemical shifts | 359 |
| 15N chemical shifts | 122 |
| 1H chemical shifts | 778 |
Additional metadata:
Assembly:
| Entity Assembly ID | Entity Name | Entity ID |
|---|---|---|
| 1 | canine prion protein | 1 |
Entities:
Entity 1, canine prion protein 113 residues - Formula weight is not available
| 1 | GLY | SER | VAL | VAL | GLY | GLY | LEU | GLY | GLY | TYR | ||||
| 2 | MET | LEU | GLY | SER | ALA | MET | SER | ARG | PRO | LEU | ||||
| 3 | ILE | HIS | PHE | GLY | ASN | ASP | TYR | GLU | ASP | ARG | ||||
| 4 | TYR | TYR | ARG | GLU | ASN | MET | TYR | ARG | TYR | PRO | ||||
| 5 | ASP | GLN | VAL | TYR | TYR | ARG | PRO | VAL | ASP | GLN | ||||
| 6 | TYR | SER | ASN | GLN | ASN | ASN | PHE | VAL | ARG | ASP | ||||
| 7 | CYS | VAL | ASN | ILE | THR | VAL | LYS | GLN | HIS | THR | ||||
| 8 | VAL | THR | THR | THR | THR | LYS | GLY | GLU | ASN | PHE | ||||
| 9 | THR | GLU | THR | ASP | MET | LYS | ILE | MET | GLU | ARG | ||||
| 10 | VAL | VAL | GLU | GLN | MET | CYS | VAL | THR | GLN | TYR | ||||
| 11 | GLN | LYS | GLU | SER | GLU | ALA | TYR | TYR | GLN | ARG | ||||
| 12 | GLY | ALA | SER |
Samples:
sample_1: canine prion protein, [U-13C; U-15N], 1 mM; sodium acetate mM
conditions_1: pH: 4.5; temperature: 293 K
Experiments:
| Name | Sample | Sample state | Sample conditions |
|---|---|---|---|
| HNCA | sample_1 | not available | conditions_1 |
| 15N edited NOESY | sample_1 | not available | conditions_1 |
| 13C edited NOESY | sample_1 | not available | conditions_1 |
Software:
No software information available
NMR spectrometers:
- Bruker DRX 750 MHz
Related Database Links:
| PDB | |
| EMBL | CAA74032 |
| GB | AAB99743 AAD12061 AAD12062 AAD12063 ABD98455 |
| REF | NP_001013441 |
| SP | B0FYL5 |
Download HSQC peak lists in one of the following formats:
CSV: Backbone
or all simulated peaks
SPARKY: Backbone
or all simulated peaks