BMRB Entry 6349

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PDB ID:
Entry in NMR Restraints Grid
Validation report in NRG-CING
Chem Shift validation: AVS_full
BMRB Entry DOI: doi:10.13018/BMR6349
MolProbity Validation Chart

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Title:
1H, 13C and 15N Chemical Shift Assignments for the LH1 Alfa Polypeptide of Rhodospirillum rubrum
Deposition date:
2004-10-12
Original release date:
2005-03-17
Authors:
Wang, Zheng-Yu; Gokan, Kazutaka; Kobayashi, Masayuki; Nozawa, Tsunenori
Citation:

Citation: Wang, Zheng-Yu; Gokan, Kazutaka; Kobayashi, Masayuki; Nozawa, Tsunenori. "Solution Structures of the Core Light-harvesting alpha and beta Polypeptides from Rhodospirillum rubrum: Implications for the Pigment-Protein and Protein-Protein Interactions"  J. Mol. Biol. 347, 465-477 (2005).
PubMed: 15740753

Assembly members:

Assembly members:
Alfa subunit of LH1 complex, polymer, 52 residues, Formula weight is not available

Natural source:

Natural source:   Common Name: Rhodospirillum rubrum   Taxonomy ID: 1085   Superkingdom: Eubacteria   Kingdom: not available   Genus/species: Rhodospirillum rubrum

Experimental source:

Experimental source:   Production method: purified from the natural source

Entity Sequences (FASTA):

Entity Sequences (FASTA):
Alfa subunit of LH1 complex: MWRIWQLFDPRQALVGLATF LFVLALLIHFILLSTERFNW LEGASTKPVQTS

Data sets:
Data typeCount
1H chemical shifts210
13C chemical shifts147
15N chemical shifts50

Additional metadata:

  • Assembly
  • Samples and Experiments
  • Software
  • Spectrometers
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Assembly:

Entity Assembly IDEntity NameEntity ID
1LH1 alfa1

Entities:

Entity 1, LH1 alfa 52 residues - Formula weight is not available

1   METTRPARGILETRPGLNLEUPHEASPPRO
2   ARGGLNALALEUVALGLYLEUALATHRPHE
3   LEUPHEVALLEUALALEULEUILEHISPHE
4   ILELEULEUSERTHRGLUARGPHEASNTRP
5   LEUGLUGLYALASERTHRLYSPROVALGLN
6   THRSER

Samples:

sample_LH1a: Alfa subunit of LH1 complex, [U-95% 13C; U-95% 15N], 0.5 – 1.5 mM; chloroform-d:methanol-d3 [1:1 (v/v)] 100%

Ex-cond: pH*: . na; temperature: 298 K

Experiments:

NameSampleSample stateSample conditions
1H-15N NOESY-HSQCnot availablenot availablenot available
1H-15N TOCSY-HSQCnot availablenot availablenot available
HNCAnot availablenot availablenot available
HN(CO)CAnot availablenot availablenot available
CBCANHnot availablenot availablenot available
CBCA(CO)NHnot availablenot availablenot available
HBHANHnot availablenot availablenot available
HBHA(CO)NHnot availablenot availablenot available

Software:

NMRView v5.0.4 -

NMR spectrometers:

  • Bruker DRX 400 MHz

Related Database Links:

PDB
GB AAA26462 ABC23771 AEO49511
PRF 0708175A
REF WP_011390724 YP_006049308 YP_428058
SP P02947
AlphaFold P02947

Download HSQC peak lists in one of the following formats:
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SPARKY: Backbone or all simulated peaks