BMRB Entry 6279

Chem Shift validation: AVS_full, LACS
BMRB Entry DOI: doi:10.13018/BMR6279

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Nicholas Rego and David Koes
3Dmol.js: molecular visualization with WebGL
Bioinformatics (2015) 31 (8): 1322-1324 doi:10.1093/bioinformatics/btu829

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Title:

1H, 13C and 15N resonance assignments and secondary structure of the murine angiogenin 4

Deposition date:

2004-07-29

Original release date:

2004-11-08

Authors:

Pan, Yun-Ru; Wu, Kuen-Phon; Lou, Yuan-Chao; Liao, You-Di; Chen, Chinpan

Citation:

Citation: Pan, Yun-Ru; Wu, Kuen-Phon; Lou, Yuan-Chao; Liao, You-Di; Chen, Chinpan. "Letter to Editor: 1H, 13C and 15N resonance assignments and secondary structure of the murine angiogenin 4" J. Biomol. NMR 31, 175-176 (2005).

Assembly members:

Assembly members:
angiogenin, polymer, 121 residues, 14178.1 Da.

Natural source:

Natural source: Common Name: house mouse Taxonomy ID: 10090 Superkingdom: Eukaryota Kingdom: Metazoa Genus/species: Mus musculus

Experimental source:

Experimental source: Production method: recombinant technology Host organism: Escherichia coli Vector: pET22b

Entity Sequences (FASTA):

Entity Sequences (FASTA):
angiogenin: MQNERYEKFLRQHYDAKPKG RDDRYCESMMKERKLTSPCK DVNTFIHGTKKNIRAICGKK GSPYGENFRISNSPFQITTC THSRGSPWPPCGYRAFKDFR YIVIACEDGWPVHFDESFIS P

Data sets:

assigned_chemical_shifts
- chemical_shift_mAng4

Data type	Count
1H chemical shifts	726
13C chemical shifts	466
15N chemical shifts	124

Additional metadata:

Assembly
Samples and Experiments
Software
Spectrometers
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Assembly:

Entity Assembly ID	Entity Name	Entity ID
1	murine angiogenin 4	1

Entities:

Entity 1, murine angiogenin 4 121 residues - 14178.1 Da.

1

MET

GLN

ASN

GLU

ARG

TYR

GLU

LYS

PHE

LEU

2

ARG

GLN

HIS

TYR

ASP

ALA

LYS

PRO

LYS

GLY

3

ARG

ASP

ARG

TYR

CYS

GLU

SER

MET

4

LYS

GLU

ARG

LYS

LEU

THR

SER

PRO

CYS

LYS

5

ASP

VAL

ASN

THR

PHE

ILE

HIS

GLY

THR

LYS

6

LYS

ASN

ILE

ARG

ALA

ILE

CYS

GLY

LYS

7

GLY

SER

PRO

TYR

GLY

GLU

ASN

PHE

ARG

ILE

8

SER

ASN

SER

PRO

PHE

GLN

ILE

THR

CYS

9

THR

HIS

SER

ARG

GLY

SER

PRO

TRP

PRO

10

CYS

GLY

TYR

ARG

ALA

PHE

LYS

ASP

PHE

ARG

11

TYR

ILE

VAL

ILE

ALA

CYS

GLU

ASP

GLY

TRP

12

PRO

VAL

HIS

PHE

ASP

GLU

SER

PHE

ILE

SER

13

PRO

Samples:

unlabeled_sample: angiogenin 1.66 mM

labeled_sample: angiogenin, [U-95% 13C; U-90% 15N], 1.5 mM

cond_set_1: pH: 5.0; temperature: 310 K; ionic strength: 0.1 M

Experiments:

Name	Sample	Sample state	Sample conditions
1H-15N HSQC	not available	not available	not available
1H-13C HSQC	not available	not available	not available
CBCA(CO)NH	not available	not available	not available
HNCACB	not available	not available	not available
HNCO	not available	not available	not available
HN(CA)CO	not available	not available	not available
C(CO)NH	not available	not available	not available
H(CCO)NH	not available	not available	not available
1H-15N TOCSY-HSQC	not available	not available	not available
1H-15N NOESY-HSQC	not available	not available	not available
HBHA(CO)NH	not available	not available	not available
HNHA	not available	not available	not available
1H-13C HCCH-TOCSY	not available	not available	not available
1H-13C NOESY-HSQC	not available	not available	not available
1H-13C TOCSY-HSQC	not available	not available	not available

Software:

XWINNMR v3.5 - process

aurelia v3.1.6 - assignment

nmrpipe - process

nmrview v5.22 - assignment

NMR spectrometers:

BRUKER DRX 600 MHz
BRUKER AVANCE 600 MHz

GenBank	AAO62354 EDL42283 AAI32445 AAI32449 AAH42938
PDB	2J4T