BMRB Entry 6208
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PDB ID:
Entry in NMR Restraints Grid
Validation report in NRG-CING
Chem Shift validation: AVS_full, LACS
BMRB Entry DOI: doi:10.13018/BMR6208
MolProbity Validation Chart
NMR-STAR file interactive viewer.
NMR-STAR v3 text file.
XML gzip file.
RDF gzip file.
All files associated with the entry
Citation: Liu, Gaohua; Shao, Ying; Xiao, Rong; Acton, Thomas; Montelione, Gaetano; Szyperski, Thomas. "1H, 13C and 15N Assigned Chemical Shifts for Diacylglycerol kinase alpha" J. Biomol. NMR ., .-..
Assembly members:
Ca.CD2, polymer, 118 residues, Formula weight is not available
Natural source: Common Name: Human Taxonomy ID: 9606 Superkingdom: Eukaryota Kingdom: Metazoa Genus/species: Homo sapiens
Experimental source: Production method: recombinant technology Host organism: Escherichia coli
Entity Sequences (FASTA):
Ca.CD2: MAKERGLISPSDFAQLQKYM
EYSTKKVSDVLKLFEDGEMA
KYVQGDAIGYEGFQQFLKIY
LEVDNVPRHLSLALFQSFET
GHCLNETNVTKDVVCLNDVS
CYFSLLEGGRPEDKLEWS
- assigned_chemical_shifts
- coupling_constants
| Data type | Count |
| 1H chemical shifts | 849 |
| 13C chemical shifts | 401 |
| 15N chemical shifts | 126 |
| coupling constants | 36 |
Additional metadata:
Assembly:
| Entity Assembly ID | Entity Name | Entity ID |
|---|---|---|
| 1 | Diacylglycerol kinase alpha | 1 |
Entities:
Entity 1, Diacylglycerol kinase alpha 118 residues - Formula weight is not available
| 1 | MET | ALA | LYS | GLU | ARG | GLY | LEU | ILE | SER | PRO | ||||
| 2 | SER | ASP | PHE | ALA | GLN | LEU | GLN | LYS | TYR | MET | ||||
| 3 | GLU | TYR | SER | THR | LYS | LYS | VAL | SER | ASP | VAL | ||||
| 4 | LEU | LYS | LEU | PHE | GLU | ASP | GLY | GLU | MET | ALA | ||||
| 5 | LYS | TYR | VAL | GLN | GLY | ASP | ALA | ILE | GLY | TYR | ||||
| 6 | GLU | GLY | PHE | GLN | GLN | PHE | LEU | LYS | ILE | TYR | ||||
| 7 | LEU | GLU | VAL | ASP | ASN | VAL | PRO | ARG | HIS | LEU | ||||
| 8 | SER | LEU | ALA | LEU | PHE | GLN | SER | PHE | GLU | THR | ||||
| 9 | GLY | HIS | CYS | LEU | ASN | GLU | THR | ASN | VAL | THR | ||||
| 10 | LYS | ASP | VAL | VAL | CYS | LEU | ASN | ASP | VAL | SER | ||||
| 11 | CYS | TYR | PHE | SER | LEU | LEU | GLU | GLY | GLY | ARG | ||||
| 12 | PRO | GLU | ASP | LYS | LEU | GLU | TRP | SER |
Samples:
sample_1: Ca.CD2, [U-13C; U-15N], 1.1 mM; DTT 10 mM; CaCl2 5 mM; NaCl 100 mM; MES 20 mM; D2O 5%; NaN3 0.02%
Conditions_1: pH: 6.5; temperature: 298 K
Experiments:
| Name | Sample | Sample state | Sample conditions |
|---|---|---|---|
| 15N 2D HSQC | sample_1 | not available | Conditions_1 |
| 13C 2D HSQC | sample_1 | not available | Conditions_1 |
| 3D HNCO | sample_1 | not available | Conditions_1 |
| 3D HNCACB | sample_1 | not available | Conditions_1 |
| 3D HNCA | sample_1 | not available | Conditions_1 |
| 3D HNcoCA | sample_1 | not available | Conditions_1 |
| 3D RD HabCabcoNHN | sample_1 | not available | Conditions_1 |
| 3D RD HCCHCOSY | sample_1 | not available | Conditions_1 |
| 3D HCcHTOCSY | sample_1 | not available | Conditions_1 |
Software:
No software information available
NMR spectrometers:
- BRUKER AVANCE 600 MHz
- BRUKER AVANCE 800 MHz
Related Database Links:
| PDB | |
| DBJ | BAG64388 BAI45990 |
| EMBL | CAA44396 CAH90948 |
| GB | AAC34804 AAC34806 AAH23523 AAH31870 AAQ02567 |
| PRF | 1702222A |
| REF | NP_001125544 NP_001336 NP_958852 NP_958853 NP_963848 |
| SP | P23743 |
| AlphaFold | P23743 |
Download HSQC peak lists in one of the following formats:
CSV: Backbone
or all simulated peaks
SPARKY: Backbone
or all simulated peaks