BMRB Entry 6166

Name: Solution structure of the second complement control protein (CCP) module of the GABA(B)R1a receptor, Pro-119 cis conformer
Published: 2004-09-07

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PDB ID: 1ss2
Entry in NMR Restraints Grid
Validation report in NRG-CING
Chem Shift validation: AVS_anomalous, AVS_full, LACS
BMRB Entry DOI: doi:10.13018/BMR6166
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Bioinformatics (2015) 31 (8): 1322-1324 doi:10.1093/bioinformatics/btu829

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Title:

Solution structure of the second complement control protein (CCP) module of the GABA(B)R1a receptor, Pro-119 cis conformer

Deposition date:

2004-04-02

Original release date:

2004-09-07

Authors:

Blein, S.; Uhrin, D.; Smith, B.; White, J.; Barlow, P.

Citation:

Citation: Blein, S.; Ginham, R.; Uhrin, D.; Smith, B.; Soares, D.; Veltel, S.; McIlhinney, R.A.; White, J.; Barlow, P.. "Structural analysis of the CCP modules of the GABAB receptor 1a: Only one of the two CCP modules is compactly folded." J. Biol. Chem. 279, 48292-48306 (2004).
PubMed: 15304491

Assembly members:

Assembly members:
Gamma-aminobutyric acid type B receptor, polymer, 68 residues, Formula weight is not available

Natural source:

Natural source: Common Name: Rat Taxonomy ID: 10116 Superkingdom: Eukaryota Kingdom: Metazoa Genus/species: Rattus norvegicus

Experimental source:

Experimental source: Production method: recombinant technology Host organism: fungal yeast Vector: PPICZALPHA

Entity Sequences (FASTA):

Entity Sequences (FASTA):
Gamma-aminobutyric acid type B receptor: EAEFVRICSKSYLTLENGKV FLTGGDLPALDGARVEFRCD PDFHLVGSSRSVCSQGQWST PKPHCQVN

Data sets:

assigned_chemical_shifts
- chemical_shift_set_1
coupling_constants
- coupling_constants_set_1

Data type	Count
1H chemical shifts	459
13C chemical shifts	230
15N chemical shifts	72
coupling constants	23

Additional metadata:

Assembly
Samples and Experiments
Software
Spectrometers
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Assembly:

Entity Assembly ID	Entity Name	Entity ID
1	Gamma-aminobutyric acid type B receptor	1

Entities:

Entity 1, Gamma-aminobutyric acid type B receptor 68 residues - Formula weight is not available

1

GLU

ALA

GLU

PHE

VAL

ARG

ILE

CYS

SER

LYS

2

SER

TYR

LEU

THR

LEU

GLU

ASN

GLY

LYS

VAL

3

PHE

LEU

THR

GLY

ASP

LEU

PRO

ALA

LEU

4

ASP

GLY

ALA

ARG

VAL

GLU

PHE

ARG

CYS

ASP

5

PRO

ASP

PHE

HIS

LEU

VAL

GLY

SER

ARG

6

SER

VAL

CYS

SER

GLN

GLY

GLN

TRP

SER

THR

7

PRO

LYS

PRO

HIS

CYS

GLN

VAL

ASN

Samples:

sample_1: Gamma-aminobutyric acid type B receptor, [U-15N; U-13C], 1 mM; deuterated sodium acetate 20 mM; D2O 10%; H2O 90%

sample_cond_1: pH: 4; temperature: 310 K; pressure: 1 atm

Experiments:

Name	Sample	Sample state	Sample conditions
3D 13C-separated NOESY	sample_1	not available	sample_cond_1
3D 15N-separated NOESY	sample_1	not available	sample_cond_1
HNHA	sample_1	not available	sample_cond_1

Software:

VNMR v6.1 - collection

AZARA v2.6 - processing

ANSIG v3.3 - data analysis

CNS v1.0 - structure solution, refinement

NMR spectrometers:

Bruker DRX 800 MHz

BMRB	6171
PDB	1SRZ 1SS2
EMBL	CAA71398 CAE84069 CAH40831 CAH40832 CAL91172
GB	AAD19656 AAD19658 AAK69540 AAL26807 EDL84628
REF	NP_112290 XP_006255941 XP_008770922
SP	Q9Z0U4
AlphaFold	Q9Z0U4